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  • HABP4
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.4 nTPM
HPA Brain:80.7 nTPM
GTEx:110.4 nTPM
FANTOM5:187.2 Scaled Tags Per Million
Pig:47.6 nTPM
Mouse:145.5 nTPM
Allen mouse:16.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055969Antibody HPA062366
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 78.8
2290 Female, age 72, unknown 101.4
2846 Female, age 79, unknown 92.8
1857 Female, age 85, left hemisphere 84.2
1781 Male, age 74, unknown 78.7
1854 Male, age 80, left hemisphere 77.8
2288 Male, age 75, left hemisphere 72.5
2289 Male, age 61, right hemisphere 62.4
2481 Female, age 94, left hemisphere 60.7
Globus pallidus, externus
nTPM: 58.1
2567 Female, age 72, unknown 63.2
2395 Male, age 75, both hemispheres 60.0
2772 Female, age 79, unknown 58.5
2646 Male, age 61, right hemisphere 57.3
1996 Male, age 80, right hemisphere 51.6
Globus pallidus, internus
nTPM: 55.9
2483 Female, age 94, right hemisphere 81.4
2287 Male, age 75, right hemisphere 76.2
2566 Female, age 72, unknown 57.2
1818 Male, age 74, unknown 48.0
2778 Female, age 91, both hemispheres 46.9
2037 Male, age 80, right hemisphere 44.3
2111 Female, age 85, right hemisphere 37.2
Nucleus accumbens
nTPM: 72.5
1856 Female, age 91, right hemisphere 102.5
1783 Male, age 74, unknown 97.1
2698 Female, age 72, unknown 87.5
1806 Female, age 85, left hemisphere 73.3
2824 Male, age 61, right hemisphere 67.6
2286 Male, age 75, left hemisphere 62.7
2391 Female, age 94, left hemisphere 51.2
2732 Male, age 80, right hemisphere 38.1
Nucleus basalis of Meynert
nTPM: 63.4
2821 Male, age 75, both hemispheres 68.4
2393 Male, age 80, right hemisphere 61.9
2484 Female, age 94, left hemisphere 61.6
2569 Male, age 61, both hemispheres 61.6
Nucleus of the diagonal band
nTPM: 65.2
2775 Male, age 80, right hemisphere 80.8
1812 Female, age 91, both hemispheres 72.2
2195 Female, age 85, both hemispheres 71.6
2029 Male, age 61, right hemisphere 55.5
1979 Male, age 74, unknown 45.8
Putamen
nTPM: 80.7
1937 Female, age 91, right hemisphere 91.9
1838 Male, age 80, right hemisphere 90.5
1829 Male, age 74, unknown 88.7
2647 Male, age 75, left hemisphere 78.5
2466 Female, age 79, unknown 76.6
2489 Female, age 72, unknown 75.1
2482 Female, age 94, left hemisphere 63.7
Septal nuclei
nTPM: 57.8
1960 Male, age 74, unknown 80.1
2031 Female, age 72, unknown 67.9
2629 Female, age 94, right hemisphere 61.5
2059 Female, age 85, both hemispheres 58.2
2009 Female, age 91, both hemispheres 55.3
2394 Male, age 61, left hemisphere 42.6
2199 Male, age 80, right hemisphere 38.7
Stria terminalis, bed nucleus
nTPM: 65.0
1974 Female, age 91, both hemispheres 78.4
2486 Female, age 94, both hemispheres 64.8
2201 Male, age 74, unknown 51.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 104.5
Samples: 246

Max nTPM: 260.1
Min nTPM: 29.6
Std nTPM: 37.6
Median nTPM: 101.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 260.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 221.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 193.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 192.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 190.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 187.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 187.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 186.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 181.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 176.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 173.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 172.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 169.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 169.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 168.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 167.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 165.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 163.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 163.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 162.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 162.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 160.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 159.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 155.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 154.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 151.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 150.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 150.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 149.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 149.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 148.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 147.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 146.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 144.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 143.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 140.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 140.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 140.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 139.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 138.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 138.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 137.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 135.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 134.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 134.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 134.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 133.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 133.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 133.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 132.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 132.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 132.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 131.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 131.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 131.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 131.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 129.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 129.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 128.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 128.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 128.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 128.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 127.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 125.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 125.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 125.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 124.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 124.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 123.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 122.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 122.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 121.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 121.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 120.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 119.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 119.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 119.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 118.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 118.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 116.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 116.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 116.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 115.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 113.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 113.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 112.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 112.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 111.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 111.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 111.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 110.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 110.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 109.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 109.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 108.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 107.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 107.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 107.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 107.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 106.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 106.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 106.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 105.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 104.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 103.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 102.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 102.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 102.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 101.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 100.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 100.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 100.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 100.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 99.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 98.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 98.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 98.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 97.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 97.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 96.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 94.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 94.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 94.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 92.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 92.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 92.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 91.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 89.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 88.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 88.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 87.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 86.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 86.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 85.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 85.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 85.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 84.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 83.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 83.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 83.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 81.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 80.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 80.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 79.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 78.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 76.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 76.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 75.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 75.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 75.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 73.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 73.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 73.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 72.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 71.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 71.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 71.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 71.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 69.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 69.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 68.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 65.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 64.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 63.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 60.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 60.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 60.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 59.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 57.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 57.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 57.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 56.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 55.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 51.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 50.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 49.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 48.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 46.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 44.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 40.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 110.4
Samples: 246

Max nTPM: 220.3
Min nTPM: 33.3
Std nTPM: 35.7
Median nTPM: 107.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 220.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 217.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 216.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 212.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 210.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 208.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 199.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 192.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 188.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 185.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 179.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 178.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 177.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 176.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 173.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 168.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 168.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 162.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 161.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 161.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 159.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 157.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 157.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 157.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 157.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 155.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 155.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 155.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 154.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 153.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 152.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 151.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 151.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 151.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 148.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 147.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 145.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 144.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 143.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 142.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 142.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 141.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 141.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 141.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 140.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 139.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 138.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 138.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 137.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 137.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 137.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 136.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 134.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 134.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 134.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 133.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 133.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 133.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 132.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 131.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 131.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 129.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 129.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 129.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 128.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 127.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 127.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 127.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 126.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 126.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 126.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 126.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 125.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 125.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 125.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 125.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 124.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 124.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 123.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 123.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 123.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 121.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 120.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 119.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 118.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 118.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 118.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 117.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 117.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 117.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 116.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 116.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 115.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 115.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 115.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 115.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 114.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 114.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 114.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 113.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 113.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 113.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 113.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 112.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 111.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 111.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 111.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 110.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 110.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 109.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 109.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 109.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 109.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 109.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 108.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 108.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 107.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 107.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 107.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 107.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 107.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 107.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 106.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 106.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 105.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 105.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 105.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 105.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 104.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 104.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 104.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 104.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 103.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 103.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 103.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 103.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 103.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 102.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 102.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 102.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 102.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 102.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 101.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 101.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 101.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 101.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 100.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 100.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 99.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 98.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 98.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 98.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 98.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 96.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 95.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 94.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 94.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 94.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 94.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 94.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 93.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 93.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 92.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 92.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 92.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 92.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 91.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 91.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 90.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 90.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 90.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 89.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 88.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 87.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 87.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 87.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 87.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 87.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 86.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 85.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 84.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 84.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 83.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 83.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 82.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 81.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 81.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 81.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 81.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 81.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 80.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 79.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 79.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 78.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 77.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 77.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 77.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 76.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 75.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 75.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 74.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 73.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 73.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 72.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 72.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 72.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 71.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 71.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 71.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 71.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 71.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 71.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 68.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 67.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 65.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 65.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 64.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 63.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 63.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 62.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 61.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 60.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 59.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 58.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 58.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 53.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 53.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 51.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 49.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 48.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 44.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 43.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.3
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Brain - Putamen (basal ganglia)
Average nTPM: 107.7
Samples: 205

Max nTPM: 228.6
Min nTPM: 46.1
Std nTPM: 32.8
Median nTPM: 104.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 228.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 194.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 190.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 182.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 179.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 178.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 172.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 172.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 165.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 164.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 163.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 163.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 163.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 162.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 159.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 158.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 157.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 156.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 154.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 153.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 151.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 149.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 148.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 148.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 148.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 147.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 146.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 142.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 142.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 142.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 140.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 140.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 139.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 139.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 138.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 138.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 138.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 137.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 137.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 136.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 136.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 135.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 135.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 133.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 133.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 133.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 132.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 132.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 131.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 131.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 130.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 130.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 129.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 129.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 129.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 129.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 128.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 128.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 128.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 127.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 126.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 125.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 125.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 124.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 124.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 123.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 122.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 122.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 120.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 120.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 119.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 118.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 118.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 118.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 117.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 117.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 116.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 116.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 116.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 116.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 116.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 115.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 114.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 113.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 113.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 112.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 112.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 111.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 111.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 111.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 109.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 109.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 108.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 107.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 106.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 106.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 106.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 105.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 105.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 105.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 104.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 104.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 103.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 102.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 102.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 101.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 101.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 101.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 100.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 99.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 99.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 98.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 98.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 98.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 97.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 97.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 97.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 96.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 96.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 95.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 95.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 95.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 95.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 94.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 93.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 93.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 92.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 92.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 92.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 91.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 90.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 90.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 90.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 90.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 89.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 89.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 89.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 89.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 89.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 88.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 88.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 86.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 86.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 86.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 86.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 85.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 84.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 84.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 83.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 83.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 83.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 82.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 81.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 81.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 81.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 80.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 80.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 79.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 79.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 78.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 77.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 77.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 74.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 74.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 73.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 73.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 71.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 71.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 71.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 70.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 69.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 67.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 67.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 66.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 66.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 66.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 64.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 63.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 63.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 60.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 58.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 57.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 55.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 46.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

187.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 112.0
FF:10164-103B2 76 years, female 112.0
Nucleus accumbens
Scaled Tags Per Million: 129.3
FF:10037-101F1 23-56 years, mixed 129.3
Putamen
Scaled Tags Per Million: 187.2
FF:10176-103C5 60 years, female 187.2
Globus pallidus
Scaled Tags Per Million: 67.4
FF:10161-103A8 76 years, female 68.1
FF:10175-103C4 60 years, female 66.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.6
Pig sample Sample description nTPM
Caudate
nTPM: 41.5
Samples: 4

Max nTPM: 51.7
Min nTPM: 34.6
Sample A Female 34.6
Sample B Female 40.7
Sample C Male 51.7
Sample D Male 38.9
Putamen
nTPM: 47.6
Samples: 4

Max nTPM: 67.9
Min nTPM: 34.3
Sample A Female 34.3
Sample B Female 42.7
Sample C Male 67.9
Sample D Male 45.4
Septum
nTPM: 38.8
Samples: 4

Max nTPM: 47.7
Min nTPM: 34.1
Sample A Female 35.1
Sample B Female 34.1
Sample C Male 47.7
Sample D Male 38.2
Ventral pallidum
nTPM: 41.8
Samples: 4

Max nTPM: 57.2
Min nTPM: 32.1
Sample A Female 32.9
Sample B Female 44.9
Sample C Male 57.2
Sample D Male 32.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 97.3
Samples: 4

Max nTPM: 104.0
Min nTPM: 92.6
Sample A Male 94.2
Sample B Male 92.6
Sample C Female 104.0
Sample D Female 98.5
Septum
nTPM: 145.5
Samples: 4

Max nTPM: 152.3
Min nTPM: 140.3
Sample A Male 148.7
Sample B Male 152.3
Sample C Female 140.8
Sample D Female 140.3
Ventral forebrain
nTPM: 131.9
Samples: 4

Max nTPM: 140.3
Min nTPM: 121.3
Sample A Male 121.3
Sample B Male 140.3
Sample C Female 137.9
Sample D Female 128.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.4
69734893 Antisense, RP_050503_01_E12, Mouse strain C57BL/6J (56 days, male) 16.4
Pallidum
Expression energy: 14.7
69734893 Antisense, RP_050503_01_E12, Mouse strain C57BL/6J (56 days, male) 14.7

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