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POLN
HPA
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  • POLN
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

POLN
Synonyms
Gene descriptioni

Full gene name according to HGNC.

DNA polymerase nu
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband p16.3
Chromosome location (bp) 2071918 - 2242121
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000130997 (version 109)
Entrez gene 353497
HGNC HGNC:18870
UniProt Q7Z5Q5 (UniProt - Evidence at protein level)
neXtProt NX_Q7Z5Q5
GeneCards POLN
Antibodypedia POLN antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

DNA polymerase with very low fidelity that catalyzes considerable misincorporation by inserting dTTP opposite a G template, and dGTP opposite a T template 1, 2. Is the least accurate of the DNA polymerase A family (i.e. POLG, POLN and POLQ) 3. Can perform accurate translesion DNA synthesis (TLS) past a 5S-thymine glycol. Can perform efficient strand displacement past a nick or a gap and gives rise to an amount of product similar to that on non-damaged template. Has no exonuclease activity 4. Error-prone DNA polymerase that preferentially misincorporates dT regardless of template sequence 5. May play a role in TLS during interstrand cross-link (ICL) repair 6. May be involved in TLS when genomic replication is blocked by extremely large major groove DNA lesions. May function in the bypass of some DNA-protein and DNA-DNA cross-links. May have a role in cellular tolerance to DNA cross-linking agents 7. Involved in the repair of DNA cross-links and double-strand break (DSB) resistance. Participates in FANCD2-mediated repair. Forms a complex with HELQ helicase that participates in homologous recombination (HR) repair and is essential for cellular protection against DNA cross-links 8.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding, DNA-directed DNA polymerase, Nucleotidyltransferase, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA repair, DNA replication
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a DNA polymerase type-A family member. The encoded protein plays a role in DNA repair and homologous recombination. This gene shares its 5' exons with some transcripts from overlapping GeneID: 79441, which encodes an augmentin-like protein complex subunit. [provided by RefSeq, Dec 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
POLN-201
ENSP00000372316
ENST00000382865
Q7Z5Q5
[Direct mapping] DNA polymerase nu
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003887 [DNA-directed DNA polymerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016740 [transferase activity]
GO:0016779 [nucleotidyltransferase activity]
GO:0019985 [translesion synthesis]
GO:0030332 [cyclin binding]
GO:0036297 [interstrand cross-link repair]
Show all
900 aa
100.3 kDa
No 0
POLN-208
ENSP00000426401
ENST00000511098
H0YA88
[Direct mapping] DNA polymerase nu
Show all
Metabolic proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003887 [DNA-directed DNA polymerase activity]
GO:0005654 [nucleoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006281 [DNA repair]
GO:0071897 [DNA biosynthetic process]
Show all
524 aa
58.4 kDa
No 0
POLN-210
ENSP00000435506
ENST00000511885
Q7Z5Q5
[Direct mapping] DNA polymerase nu
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0003676 [nucleic acid binding]
GO:0003677 [DNA binding]
GO:0003887 [DNA-directed DNA polymerase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016740 [transferase activity]
GO:0016779 [nucleotidyltransferase activity]
GO:0019985 [translesion synthesis]
GO:0030332 [cyclin binding]
GO:0036297 [interstrand cross-link repair]
Show all
900 aa
100.3 kDa
No 0

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