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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
116.8
nTPM
FANTOM5:
86.0
Scaled Tags Per Million
Allen mouse:
7.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
116.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 88.4
1984
Male, age 76, both hemispheres
143.5
2301
Female, age 85, both hemispheres
76.7
2188
Female, age 91, both hemispheres
68.6
2090
Male, age 80, both hemispheres
64.7
Dorsal cochlear nucleus nTPM: 69.4
2058
Male, age 76, both hemispheres
78.3
2187
Female, age 91, both hemispheres
71.3
2370
Male, age 61, both hemispheres
70.0
2802
Male, age 74, right hemisphere
63.7
2378
Male, age 80, both hemispheres
63.6
Dorsal tegmental nucleus nTPM: 71.1
1936
Male, age 76, left hemisphere
78.1
2326
Male, age 74, both hemispheres
72.6
2358
Male, age 61, both hemispheres
68.4
2083
Male, age 80, both hemispheres
65.4
Dorsolateral tegmental area nTPM: 82.9
2360
Male, age 74, both hemispheres
135.4
2141
Male, age 76, both hemispheres
91.0
2751
Female, age 85, both hemispheres
65.4
2654
Male, age 80, both hemispheres
62.9
2337
Male, age 61, both hemispheres
59.7
Kolliker-Fuse nucleus nTPM: 74.2
2793
Female, age 91, left hemisphere
82.5
2315
Male, age 76, right hemisphere
71.5
2163
Male, age 80, both hemispheres
68.6
Lateral lemniscal nuclei nTPM: 106.0
2169
Male, age 76, both hemispheres
125.5
2036
Male, age 80, both hemispheres
120.4
2746
Female, age 85, left hemisphere
104.0
2453
Male, age 74, right hemisphere
92.9
2320
Female, age 91, left hemisphere
87.5
Lateral parabrachial nucleus nTPM: 82.7
2139
Female, age 85, right hemisphere
120.3
2013
Male, age 80, both hemispheres
80.3
2790
Male, age 61, both hemispheres
71.2
2792
Male, age 76, both hemispheres
59.1
Lateral vestibular nucleus nTPM: 71.3
2184
Male, age 76, both hemispheres
79.0
2311
Male, age 80, both hemispheres
63.7
Locus coeruleus nTPM: 90.1
2123
Female, age 91, both hemispheres
123.4
1980
Male, age 76, both hemispheres
98.7
2720
Male, age 74, both hemispheres
95.5
2014
Male, age 55, unknown
83.7
2162
Male, age 80, both hemispheres
80.7
2788
Male, age 74, unknown
75.9
2317
Female, age 72, unknown
72.9
Medial parabrachial nucleus nTPM: 80.8
2463
Female, age 85, right hemisphere
113.1
2854
Male, age 80, both hemispheres
81.0
2156
Male, age 61, both hemispheres
74.4
2786
Male, age 76, both hemispheres
69.3
2170
Female, age 91, both hemispheres
66.1
Medial periolivary nuclei nTPM: 96.0
2063
Male, age 76, both hemispheres
123.4
2171
Female, age 85, both hemispheres
117.4
2458
Female, age 91, both hemispheres
90.1
2081
Male, age 80, both hemispheres
74.9
2791
Male, age 74, right hemisphere
74.1
Motor facial nucleus nTPM: 102.7
2062
Male, age 76, both hemispheres
126.8
2327
Male, age 80, both hemispheres
122.6
2795
Female, age 91, both hemispheres
118.6
2365
Male, age 74, right hemisphere
88.8
2697
Female, age 85, both hemispheres
84.6
2126
Male, age 61, both hemispheres
74.6
Motor trigeminal nucleus nTPM: 80.5
2079
Male, age 80, both hemispheres
108.6
2321
Female, age 91, both hemispheres
83.9
2560
Male, age 74, both hemispheres
73.4
2335
Male, age 61, both hemispheres
70.8
2309
Male, age 76, both hemispheres
65.8
Nuclei of the trapezoid body nTPM: 116.8
2735
Female, age 85, both hemispheres
129.0
2159
Male, age 61, both hemispheres
128.2
1983
Male, age 76, both hemispheres
112.0
2166
Male, age 80, both hemispheres
110.1
2368
Female, age 91, both hemispheres
104.8
Nucleus raphe magnus nTPM: 114.9
2172
Female, age 85, both hemispheres
141.8
2160
Male, age 61, both hemispheres
138.2
2328
Male, age 80, both hemispheres
107.9
2459
Female, age 91, both hemispheres
101.9
2051
Male, age 76, both hemispheres
100.7
2455
Male, age 74, both hemispheres
99.1
Paramedian reticular nucleus nTPM: 71.8
2050
Female, age 85, both hemispheres
87.9
2057
Male, age 80, both hemispheres
78.8
2313
Male, age 61, both hemispheres
66.1
2052
Male, age 76, both hemispheres
54.2
Pedunculopontine tegmental nucleus nTPM: 72.8
1921
Female, age 85, both hemispheres
89.3
2338
Male, age 61, both hemispheres
68.6
2334
Male, age 80, both hemispheres
60.5
Pontine nuclei nTPM: 105.2
2787
Female, age 85, both hemispheres
136.6
1863
Male, age 55, unknown
132.9
2727
Male, age 61, right hemisphere
126.9
1968
Male, age 76, left hemisphere
109.7
2109
Female, age 72, unknown
104.7
2115
Male, age 80, left hemisphere
88.0
2319
Female, age 91, both hemispheres
72.5
2454
Male, age 74, left hemisphere
70.6
Pontine raphe nucleus nTPM: 90.2
2122
Female, age 85, midline
105.9
2853
Male, age 76, midline
74.4
Posteroventral cochlear nucleus nTPM: 61.9
2752
Female, age 85, both hemispheres
82.8
2070
Male, age 76, both hemispheres
64.6
2371
Male, age 61, both hemispheres
61.7
2135
Female, age 91, both hemispheres
52.1
2341
Male, age 80, both hemispheres
48.3
Principal sensory trigeminal nucleus nTPM: 102.6
2158
Male, age 61, both hemispheres
135.9
2008
Male, age 80, left hemisphere
117.3
2367
Female, age 91, left hemisphere
81.4
2324
Male, age 76, both hemispheres
75.8
Reticular pontine nucleus, caudal nTPM: 88.5
2332
Male, age 80, right hemisphere
117.0
2092
Male, age 76, both hemispheres
94.3
2457
Female, age 91, both hemispheres
76.5
2559
Male, age 74, both hemispheres
66.2
Reticular pontine nucleus, oral nTPM: 75.6
2012
Female, age 85, both hemispheres
89.8
2361
Male, age 74, both hemispheres
79.3
2167
Male, age 76, both hemispheres
74.5
2366
Female, age 91, both hemispheres
69.9
1939
Male, age 80, both hemispheres
64.6
Reticulotegmental nucleus nTPM: 81.2
2325
Male, age 76, both hemispheres
95.7
2333
Male, age 80, both hemispheres
81.8
2322
Female, age 91, both hemispheres
78.8
2452
Male, age 74, both hemispheres
68.6
Spinal trigeminal nucleus, oral nTPM: 83.4
2737
Female, age 85, both hemispheres
103.8
1978
Male, age 76, both hemispheres
79.4
2164
Male, age 80, both hemispheres
66.9
Subcoeruleus area nTPM: 78.2
2089
Male, age 76, left hemisphere
102.3
1958
Male, age 80, both hemispheres
85.2
2323
Female, age 91, left hemisphere
74.6
2451
Male, age 74, both hemispheres
65.2
2369
Female, age 85, left hemisphere
63.5
Superior olive nTPM: 97.8
1875
Female, age 85, both hemispheres
116.0
2329
Male, age 80, right hemisphere
105.5
2561
Female, age 91, both hemispheres
99.2
2020
Male, age 76, both hemispheres
92.0
2364
Male, age 74, right hemisphere
76.1
Ventral periolivary nuclei nTPM: 111.8
2130
Female, age 85, both hemispheres
143.6
2165
Male, age 80, both hemispheres
112.5
2794
Female, age 91, left hemisphere
104.9
2023
Male, age 76, both hemispheres
86.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 87.4
2161
Male, age 80, both hemispheres
97.0
1959
Male, age 76, both hemispheres
95.8
2456
Female, age 91, both hemispheres
90.6
2449
Male, age 74, both hemispheres
88.6
2840
Female, age 85, both hemispheres
78.4
2359
Male, age 61, both hemispheres
73.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
