HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:47.1 nTPM
HPA Brain:117.6 nTPM
GTEx:47.1 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:154.6 nTPM
Mouse:82.0 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063203
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 117.6
Sample id Sample description nTPM
Hippocampus
nTPM: 80.8
2148 Female, age 91, left hemisphere 92.3
2621 Female, age 67, right hemisphere 85.8
2529 Female, age 94, left hemisphere 81.0
1898 Male, age 80, left hemisphere 77.1
1911 Female, age 85, right hemisphere 76.1
1855 Male, age 76, left hemisphere 72.6
Dentate gyrus
nTPM: 87.6
2530 Female, age 94, left hemisphere 126.6
2531 Female, age 67, both hemispheres 100.8
1927 Female, age 91, both hemispheres 88.4
2010 Male, age 76, both hemispheres 75.0
2246 Female, age 85, both hemispheres 69.7
2528 Male, age 74, both hemispheres 65.0
Entorhinal gyrus
nTPM: 117.6
1787 Male, age 76, left hemisphere 130.7
2686 Male, age 75, right hemisphere 127.1
2613 Female, age 94, left hemisphere 126.0
2764 Male, age 80, right hemisphere 125.2
1938 Female, age 85, left hemisphere 104.6
2117 Female, age 91, right hemisphere 92.0
Hippocampus, CA1
nTPM: 77.9
2749 Male, age 80, left hemisphere 108.2
2045 Male, age 76, both hemispheres 84.8
1873 Female, age 85, both hemispheres 72.6
2527 Male, age 74, both hemispheres 62.5
2082 Female, age 91, right hemisphere 61.4
Hippocampus, CA2
nTPM: 76.5
1963 Male, age 80, left hemisphere 94.2
2437 Female, age 94, left hemisphere 83.9
1892 Male, age 76, both hemispheres 83.6
1940 Female, age 85, left hemisphere 75.1
2113 Female, age 91, right hemisphere 64.1
2249 Male, age 74, both hemispheres 57.9
Hippocampus, CA3
nTPM: 77.8
2137 Male, age 80, left hemisphere 95.5
2861 Female, age 67, both hemispheres 90.5
1867 Male, age 76, both hemispheres 81.3
2620 Female, age 94, left hemisphere 80.8
1891 Female, age 85, both hemispheres 72.9
2436 Male, age 74, both hemispheres 45.7
Parahippocampal cortex
nTPM: 92.5
2532 Female, age 72, left hemisphere 117.1
1990 Female, age 91, right hemisphere 112.0
1933 Female, age 85, both hemispheres 105.3
2245 Female, age 91, both hemispheres 102.3
1850 Male, age 80, both hemispheres 95.4
2622 Female, age 67, right hemisphere 94.8
2018 Male, age 76, both hemispheres 81.8
2692 Male, age 74, both hemispheres 81.1
2693 Female, age 94, both hemispheres 69.1
2250 Female, age 67, right hemisphere 65.6
Perirhinal gyrus
nTPM: 99.8
2848 Male, age 76, right hemisphere 118.6
1847 Female, age 91, left hemisphere 99.0
1794 Male, age 80, right hemisphere 98.5
1841 Female, age 85, right hemisphere 97.6
2521 Female, age 94, right hemisphere 85.2
Subiculum
nTPM: 84.8
1977 Female, age 85, both hemispheres 102.1
1901 Male, age 80, both hemispheres 96.2
2438 Female, age 94, left hemisphere 91.1
2042 Male, age 76, both hemispheres 78.6
2619 Male, age 74, both hemispheres 72.3
2729 Female, age 91, right hemisphere 68.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 145.6
Min nTPM: 8.5
Std nTPM: 19.2
Median nTPM: 43.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 145.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 127.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 122.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 115.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 100.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 92.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 88.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 87.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 86.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 85.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10153-102I9 76 years, female 78.9
FF:10169-103B7 60 years, female 69.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 154.6
Pig sample Sample description nTPM
Subiculum
nTPM: 115.7
Samples: 4

Max nTPM: 159.0
Min nTPM: 93.6
Sample A Female 159.0
Sample B Female 108.5
Sample C Male 101.5
Sample D Male 93.6
Dorsal hippocampus
nTPM: 125.2
Samples: 4

Max nTPM: 144.3
Min nTPM: 95.7
Sample A Female 144.3
Sample B Female 129.5
Sample C Male 131.3
Sample D Male 95.7
Entorhinal cortex
nTPM: 154.6
Samples: 4

Max nTPM: 172.2
Min nTPM: 140.5
Sample A Female 140.5
Sample B Female 161.6
Sample C Male 172.2
Sample D Male 144.1
Ventral hippocampus
nTPM: 109.0
Samples: 4

Max nTPM: 152.3
Min nTPM: 78.3
Sample A Female 78.3
Sample B Female 83.0
Sample C Male 122.4
Sample D Male 152.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 82.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.0
Samples: 4

Max nTPM: 89.3
Min nTPM: 68.3
Sample A Male 85.9
Sample B Male 84.3
Sample C Female 68.3
Sample D Female 89.3
Hippocampal formation
nTPM: 62.3
Samples: 4

Max nTPM: 69.8
Min nTPM: 56.3
Sample A Male 57.0
Sample B Male 66.2
Sample C Female 69.8
Sample D Female 56.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
71378475 Antisense, RP_050510_03_G10, Mouse strain C57BL/6J (56 days, male) 15.3
74300777 Antisense, RP_051219_03_G06, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org