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ABCB7
HPA
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  • ABCB7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ABCB7
Synonyms ABC7, ASAT, Atm1p, EST140535
Gene descriptioni

Full gene name according to HGNC.

ATP binding cassette subfamily B member 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q13.3
Chromosome location (bp) 75051048 - 75156732
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000131269 (version 109)
Entrez gene 22
HGNC HGNC:48
UniProt O75027 (UniProt - Evidence at protein level)
neXtProt NX_O75027
GeneCards ABCB7
Antibodypedia ABCB7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Exports glutathione-coordinated iron-sulfur clusters such as [2Fe-2S]-(GS)4 cluster from the mitochondria to the cytosol in an ATP-dependent manner allowing the assembly of the cytosolic iron-sulfur (Fe/S) cluster-containing proteins and participates in iron homeostasis 1, 2, 3. Moreover, through a functional complex formed of ABCB7, FECH and ABCB10, also plays a role in the cellular iron homeostasis, mitochondrial function and heme biosynthesis 4. In cardiomyocytes, regulates cellular iron homeostasis and cellular reactive oxygen species (ROS) levels through its interaction with COX4I1 (By similarity). May also play a role in hematopoiesis (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This gene encodes a half-transporter involved in the transport of heme from the mitochondria to the cytosol. With iron/sulfur cluster precursors as its substrates, this protein may play a role in metal homeostasis. Mutations in this gene have been associated with mitochondrial iron accumulation and isodicentric (X)(q13) and sideroblastic anemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ABCB7-201
ENSP00000253577
ENST00000253577
O75027
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
A0A0S2Z2Z3
[Target identity:100%; Query identity:100%] ATP-binding cassette sub-family B member 7 isoform 1; ATP-binding cassette, sub-family B (MDR/TAP), member 7, isoform CRA_e
Show all
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0015232 [heme transmembrane transporter activity]
GO:0015886 [heme transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0016887 [ATP hydrolysis activity]
GO:0034755 [iron ion transmembrane transport]
GO:0042626 [ATPase-coupled transmembrane transporter activity]
GO:0042803 [protein homodimerization activity]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070455 [positive regulation of heme biosynthetic process]
GO:0140359 [ABC-type transporter activity]
GO:0140466 [iron-sulfur cluster export from the mitochondrion]
GO:0140481 [ABC-type iron-sulfur cluster transporter activity]
GO:1903331 [positive regulation of iron-sulfur cluster assembly]
GO:1903427 [negative regulation of reactive oxygen species biosynthetic process]
Show all
753 aa
82.8 kDa
No 7
ABCB7-202
ENSP00000343849
ENST00000339447
O75027
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0015232 [heme transmembrane transporter activity]
GO:0015886 [heme transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0016887 [ATP hydrolysis activity]
GO:0034755 [iron ion transmembrane transport]
GO:0042626 [ATPase-coupled transmembrane transporter activity]
GO:0042803 [protein homodimerization activity]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070455 [positive regulation of heme biosynthetic process]
GO:0140359 [ABC-type transporter activity]
GO:0140466 [iron-sulfur cluster export from the mitochondrion]
GO:0140481 [ABC-type iron-sulfur cluster transporter activity]
GO:1903331 [positive regulation of iron-sulfur cluster assembly]
GO:1903427 [negative regulation of reactive oxygen species biosynthetic process]
Show all
712 aa
78.2 kDa
No 7
ABCB7-203
ENSP00000362492
ENST00000373394
O75027
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006879 [cellular iron ion homeostasis]
GO:0015232 [heme transmembrane transporter activity]
GO:0015886 [heme transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016226 [iron-sulfur cluster assembly]
GO:0016887 [ATP hydrolysis activity]
GO:0034755 [iron ion transmembrane transport]
GO:0042626 [ATPase-coupled transmembrane transporter activity]
GO:0042803 [protein homodimerization activity]
GO:0055072 [iron ion homeostasis]
GO:0055085 [transmembrane transport]
GO:0070455 [positive regulation of heme biosynthetic process]
GO:0140359 [ABC-type transporter activity]
GO:0140466 [iron-sulfur cluster export from the mitochondrion]
GO:0140481 [ABC-type iron-sulfur cluster transporter activity]
GO:1903331 [positive regulation of iron-sulfur cluster assembly]
GO:1903427 [negative regulation of reactive oxygen species biosynthetic process]
Show all
752 aa
82.6 kDa
No 7
ABCB7-206
ENSP00000432813
ENST00000526404
E9PNQ5
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
159 aa
17.5 kDa
No 0
ABCB7-207
ENSP00000436586
ENST00000529949
B4DGL8
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial; cDNA FLJ53391, highly similar to ATP-binding cassette sub-family B member 7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
702 aa
77.1 kDa
No 8
ABCB7-208
ENSP00000435521
ENST00000534524
E9PJR8
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
188 aa
20.6 kDa
No 2
ABCB7-210
ENSP00000479985
ENST00000620875
A0A087WW65
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
713 aa
78.3 kDa
No 7
ABCB7-212
ENSP00000493713
ENST00000644766
A0A2R8Y473
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
651 aa
71.2 kDa
No 6
ABCB7-213
ENSP00000496526
ENST00000645829
A0A5F9ZA98
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
757 aa
83.3 kDa
No 6
ABCB7-217
ENSP00000499543
ENST00000669573
A0A590UJS8
[Direct mapping] Iron-sulfur clusters transporter ABCB7, mitochondrial
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0055085 [transmembrane transport]
GO:0140359 [ABC-type transporter activity]
Show all
693 aa
76 kDa
No 6

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