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CA6
HPA
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  • CA6
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CA6
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Carbonic anhydrase 6
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
FDA approved drug targets
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p36.23
Chromosome location (bp) 8945867 - 8975092
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000131686 (version 109)
Entrez gene 765
HGNC HGNC:1380
UniProt P23280 (UniProt - Evidence at protein level)
neXtProt NX_P23280
GeneCards CA6
Antibodypedia CA6 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Reversible hydration of carbon dioxide. Its role in saliva is unknown.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Lyase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is one of several isozymes of carbonic anhydrase. This protein is found only in salivary glands and saliva and protein may play a role in the reversible hydratation of carbon dioxide though its function in saliva is unknown. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CA6-201
ENSP00000366654
ENST00000377436
P23280
[Direct mapping] Carbonic anhydrase 6
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001580 [detection of chemical stimulus involved in sensory perception of bitter taste]
GO:0004089 [carbonate dehydratase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006730 [one-carbon metabolic process]
GO:0008270 [zinc ion binding]
GO:0016829 [lyase activity]
GO:0016836 [hydro-lyase activity]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
313 aa
35.4 kDa
Yes 0
CA6-202
ENSP00000366661
ENST00000377442
P23280
[Direct mapping] Carbonic anhydrase 6
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001580 [detection of chemical stimulus involved in sensory perception of bitter taste]
GO:0004089 [carbonate dehydratase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006730 [one-carbon metabolic process]
GO:0008270 [zinc ion binding]
GO:0016829 [lyase activity]
GO:0016836 [hydro-lyase activity]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
248 aa
28.7 kDa
Yes 0
CA6-203
ENSP00000366662
ENST00000377443
P23280
[Direct mapping] Carbonic anhydrase 6
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001580 [detection of chemical stimulus involved in sensory perception of bitter taste]
GO:0004089 [carbonate dehydratase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006730 [one-carbon metabolic process]
GO:0008270 [zinc ion binding]
GO:0016829 [lyase activity]
GO:0016836 [hydro-lyase activity]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
308 aa
35.4 kDa
Yes 0
CA6-205
ENSP00000435280
ENST00000480186
Q8N4G4
[Direct mapping] Carbonic anhydrase 6
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004089 [carbonate dehydratase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0006730 [one-carbon metabolic process]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
179 aa
19.7 kDa
Yes 0
CA6-206
ENSP00000447108
ENST00000549778
F8W148
[Direct mapping] Carbonic anhydrase
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004089 [carbonate dehydratase activity]
GO:0005576 [extracellular region]
GO:0006730 [one-carbon metabolic process]
GO:0008270 [zinc ion binding]
GO:0016829 [lyase activity]
GO:0046872 [metal ion binding]
Show all
187 aa
21.1 kDa
Yes 0

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