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PPP1R1B
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  • PPP1R1B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:1417.6 nTPM
FANTOM5:1200.8 Scaled Tags Per Million
Pig:1790.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048630Antibody HPA061142Antibody CAB004026
Glial cells MediumNot detectedLow
Neuronal cells MediumNot detectedHigh






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1417.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1417.6
Samples: 246

Max nTPM: 3325.4
Min nTPM: 88.4
Std nTPM: 716.9
Median nTPM: 1392.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3325.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3226.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 3150.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 3133.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3091.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2961.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2871.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2821.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2711.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2654.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2654.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2642.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2633.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2553.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2492.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2478.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2461.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2425.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2417.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2403.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2400.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2381.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 2332.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2330.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2316.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2297.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2288.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 2288.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 2281.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2276.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 2268.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2267.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2249.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2239.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2232.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2225.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2203.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 2196.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2188.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2180.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 2173.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2161.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2149.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2147.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 2143.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2133.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2131.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2126.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2119.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2112.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2079.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2071.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2054.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2046.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2045.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2036.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2035.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2026.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1996.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1994.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1984.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1984.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1974.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1969.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1967.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1947.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1941.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1935.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1928.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1907.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1896.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1871.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1863.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1859.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1854.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1847.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1846.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1832.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1830.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1825.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1798.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1797.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1794.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1793.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1780.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1751.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1746.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1733.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1732.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1722.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1709.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1703.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1695.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1692.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1678.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1677.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1667.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1625.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1606.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1600.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1593.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1591.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1584.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1577.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1570.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1566.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1556.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1553.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1551.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1537.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1530.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1519.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1487.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1485.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1484.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1474.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1473.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1457.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1429.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1429.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1425.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1413.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1401.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1384.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1364.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1364.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1359.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1337.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1323.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1318.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1318.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1311.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1302.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1301.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1290.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1286.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1264.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1241.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1233.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1231.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1201.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1183.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1179.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1172.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1169.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1164.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1147.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1130.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1128.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1119.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1117.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1110.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1106.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1086.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1072.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1066.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1059.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1027.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1020.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1016.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 998.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 992.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 982.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 979.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 979.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 978.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 967.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 954.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 953.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 943.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 937.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 921.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 915.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 907.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 905.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 904.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 870.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 865.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 824.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 815.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 814.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 811.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 775.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 769.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 768.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 764.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 758.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 753.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 743.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 723.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 713.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 713.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 692.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 688.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 685.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 677.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 672.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 667.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 646.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 644.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 633.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 629.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 621.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 608.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 607.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 606.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 591.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 583.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 579.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 561.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 560.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 553.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 550.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 542.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 530.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 521.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 518.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 517.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 501.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 499.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 498.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 494.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 494.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 487.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 484.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 471.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 466.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 464.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 459.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 459.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 448.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 440.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 424.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 416.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 395.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 392.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 391.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 389.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 380.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 360.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 345.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 329.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 315.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 311.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 198.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 88.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1200.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1200.8
FF:10164-103B2 76 years, female 1200.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1790.5
Pig sample Sample description nTPM
Caudate
nTPM: 1790.5
Samples: 4

Max nTPM: 2505.3
Min nTPM: 1252.2
Sample A Female 1252.2
Sample B Female 1508.0
Sample C Male 2505.3
Sample D Male 1896.6

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