HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi 		143.922
RNA expressioni
Consensus:146.1 nTPM
HPA Brain:170.7 nTPM
GTEx:146.1 nTPM
FANTOM5:176.3 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:37.4 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048630Antibody HPA061142Antibody CAB004026
Glial cells Not detectedMediumMedium
Neuronal cells Not detectedNot detectedLow







HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA048630
Hippocampal formation mean intensity 143.922
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 66.560
Molecular layer of the dentate gyrus 23.034
Granular dentate gyrus 100.118
CA1 - oriens layer 18.094
CA1 - pyramidal layer 77.500
CA1 - radiatum layer 21.391
CA2 - oriens layer 13.093
CA2 - pyramidal layer 100.359
CA2 - radiatum layer 30.479
CA3 - oriens layer 30.959
CA3 - pyramidal layer 73.445
CA3 - radiatum layer 31.138
Stratum lucidum 38.745
Lacunosum moleculare 41.580
Subiculum 98.312

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 170.7
Sample id Sample description nTPM
Hippocampus
nTPM: 149.4
2148 Female, age 91, left hemisphere 169.6
2529 Female, age 94, left hemisphere 160.2
1911 Female, age 85, right hemisphere 159.1
2621 Female, age 67, right hemisphere 144.7
1855 Male, age 76, left hemisphere 133.5
1898 Male, age 80, left hemisphere 129.3
Dentate gyrus
nTPM: 117.1
2246 Female, age 85, both hemispheres 135.9
2528 Male, age 74, both hemispheres 133.1
2530 Female, age 94, left hemisphere 119.7
2531 Female, age 67, both hemispheres 109.8
1927 Female, age 91, both hemispheres 102.6
2010 Male, age 76, both hemispheres 101.6
Entorhinal gyrus
nTPM: 147.3
2117 Female, age 91, right hemisphere 171.1
1938 Female, age 85, left hemisphere 168.3
2686 Male, age 75, right hemisphere 139.6
2764 Male, age 80, right hemisphere 138.1
1787 Male, age 76, left hemisphere 135.3
2613 Female, age 94, left hemisphere 131.6
Hippocampus, CA1
nTPM: 127.0
2527 Male, age 74, both hemispheres 159.5
1873 Female, age 85, both hemispheres 138.1
2082 Female, age 91, right hemisphere 128.1
2749 Male, age 80, left hemisphere 105.8
2045 Male, age 76, both hemispheres 103.3
Hippocampus, CA2
nTPM: 124.8
2249 Male, age 74, both hemispheres 181.5
2113 Female, age 91, right hemisphere 146.1
1940 Female, age 85, left hemisphere 116.0
2437 Female, age 94, left hemisphere 112.8
1963 Male, age 80, left hemisphere 111.7
1892 Male, age 76, both hemispheres 80.8
Hippocampus, CA3
nTPM: 170.7
2436 Male, age 74, both hemispheres 386.4
2861 Female, age 67, both hemispheres 178.8
2137 Male, age 80, left hemisphere 128.8
1891 Female, age 85, both hemispheres 118.5
2620 Female, age 94, left hemisphere 114.3
1867 Male, age 76, both hemispheres 97.6
Parahippocampal cortex
nTPM: 158.2
2622 Female, age 67, right hemisphere 227.5
2692 Male, age 74, both hemispheres 182.8
1850 Male, age 80, both hemispheres 169.6
2245 Female, age 91, both hemispheres 158.6
2532 Female, age 72, left hemisphere 156.3
1933 Female, age 85, both hemispheres 154.6
2693 Female, age 94, both hemispheres 143.5
1990 Female, age 91, right hemisphere 133.7
2250 Female, age 67, right hemisphere 130.1
2018 Male, age 76, both hemispheres 125.8
Perirhinal gyrus
nTPM: 150.0
1794 Male, age 80, right hemisphere 198.8
1841 Female, age 85, right hemisphere 169.1
1847 Female, age 91, left hemisphere 143.3
2521 Female, age 94, right hemisphere 121.8
2848 Male, age 76, right hemisphere 117.0
Subiculum
nTPM: 138.8
2619 Male, age 74, both hemispheres 220.6
2729 Female, age 91, right hemisphere 164.7
2438 Female, age 94, left hemisphere 127.6
1977 Female, age 85, both hemispheres 109.7
2042 Male, age 76, both hemispheres 106.7
1901 Male, age 80, both hemispheres 103.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 146.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.1
Samples: 197

Max nTPM: 518.1
Min nTPM: 19.1
Std nTPM: 73.6
Median nTPM: 134.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 518.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 445.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 375.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 373.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 333.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 331.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 300.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 299.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 297.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 286.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 286.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 176.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.3
FF:10153-102I9 76 years, female 223.9
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 52.5
Pig sample Sample description nTPM
Subiculum
nTPM: 34.6
Samples: 4

Max nTPM: 48.8
Min nTPM: 23.8
Sample A Female 39.6
Sample B Female 23.8
Sample C Male 26.1
Sample D Male 48.8
Dorsal hippocampus
nTPM: 49.3
Samples: 4

Max nTPM: 63.0
Min nTPM: 40.4
Sample A Female 40.5
Sample B Female 40.4
Sample C Male 53.4
Sample D Male 63.0
Entorhinal cortex
nTPM: 52.5
Samples: 4

Max nTPM: 72.0
Min nTPM: 32.2
Sample A Female 61.8
Sample B Female 72.0
Sample C Male 43.9
Sample D Male 32.2
Ventral hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 58.9
Min nTPM: 22.4
Sample A Female 22.4
Sample B Female 24.7
Sample C Male 38.9
Sample D Male 58.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 38.3
Min nTPM: 22.0
Sample A Male 38.3
Sample B Male 27.3
Sample C Female 22.0
Sample D Female 34.9
Hippocampal formation
nTPM: 37.4
Samples: 4

Max nTPM: 55.5
Min nTPM: 29.5
Sample A Male 30.3
Sample B Male 29.5
Sample C Female 34.3
Sample D Female 55.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
576432 Antisense, RP_040826_01_H06, Mouse strain C57BL/6J (56 days, male) 18.4
73732146 Antisense, RP_051121_04_A04, Mouse strain C57BL/6J (56 days, male) 6.2

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