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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:117.0 nTPM
HPA Brain:41.0 nTPM
GTEx:117.0 nTPM
FANTOM5:141.7 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:73.7 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA022856Antibody HPA023489
Glial cells MediumMedium
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 41.0
2481 Female, age 94, left hemisphere 60.7
1857 Female, age 85, left hemisphere 51.2
2290 Female, age 72, unknown 50.0
1854 Male, age 80, left hemisphere 40.8
2288 Male, age 75, left hemisphere 35.8
2846 Female, age 79, unknown 33.6
2289 Male, age 61, right hemisphere 28.9
1781 Male, age 74, unknown 26.9
Globus pallidus, externus
nTPM: 40.0
1996 Male, age 80, right hemisphere 60.6
2646 Male, age 61, right hemisphere 46.2
2772 Female, age 79, unknown 46.1
2395 Male, age 75, both hemispheres 25.4
2567 Female, age 72, unknown 21.9
Globus pallidus, internus
nTPM: 39.7
2483 Female, age 94, right hemisphere 63.2
1818 Male, age 74, unknown 49.0
2037 Male, age 80, right hemisphere 47.6
2778 Female, age 91, both hemispheres 38.9
2287 Male, age 75, right hemisphere 36.8
2111 Female, age 85, right hemisphere 22.6
2566 Female, age 72, unknown 20.0
Nucleus accumbens
nTPM: 38.4
2286 Male, age 75, left hemisphere 50.8
1856 Female, age 91, right hemisphere 46.4
1806 Female, age 85, left hemisphere 43.3
2824 Male, age 61, right hemisphere 37.1
2391 Female, age 94, left hemisphere 36.0
2698 Female, age 72, unknown 35.8
1783 Male, age 74, unknown 30.6
2732 Male, age 80, right hemisphere 27.6
Nucleus basalis of Meynert
nTPM: 35.1
2569 Male, age 61, both hemispheres 53.0
2393 Male, age 80, right hemisphere 33.2
2484 Female, age 94, left hemisphere 30.3
2821 Male, age 75, both hemispheres 23.9
Nucleus of the diagonal band
nTPM: 25.6
1812 Female, age 91, both hemispheres 28.7
1979 Male, age 74, unknown 28.6
2195 Female, age 85, both hemispheres 25.8
2775 Male, age 80, right hemisphere 22.9
2029 Male, age 61, right hemisphere 21.8
Putamen
nTPM: 31.6
2482 Female, age 94, left hemisphere 44.1
1937 Female, age 91, right hemisphere 38.3
1838 Male, age 80, right hemisphere 34.6
2466 Female, age 79, unknown 31.3
1829 Male, age 74, unknown 27.4
2489 Female, age 72, unknown 23.4
2647 Male, age 75, left hemisphere 21.9
Septal nuclei
nTPM: 26.0
2199 Male, age 80, right hemisphere 35.8
2031 Female, age 72, unknown 31.0
2059 Female, age 85, both hemispheres 27.0
1960 Male, age 74, unknown 25.4
2394 Male, age 61, left hemisphere 23.0
2009 Female, age 91, both hemispheres 22.0
2629 Female, age 94, right hemisphere 17.5
Stria terminalis, bed nucleus
nTPM: 25.9
2201 Male, age 74, unknown 31.1
2486 Female, age 94, both hemispheres 23.8
1974 Female, age 91, both hemispheres 22.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101.3
Samples: 246

Max nTPM: 382.2
Min nTPM: 30.4
Std nTPM: 46.9
Median nTPM: 89.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 382.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 303.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 256.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 226.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 220.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 205.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 202.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 199.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 196.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 194.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 191.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 182.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 178.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 177.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 175.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 174.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 172.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 172.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 170.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 168.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 167.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 166.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 165.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 165.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 165.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 162.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 162.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 158.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 156.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 155.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 151.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 150.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 148.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 146.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 146.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 145.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 143.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 143.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 141.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 140.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 140.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 140.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 139.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 138.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 138.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 136.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 135.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 134.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 133.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 133.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 132.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 131.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 131.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 131.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 131.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 129.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 128.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 127.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 126.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 126.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 121.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 121.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 118.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 117.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 117.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 116.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 116.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 116.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 115.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 114.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 114.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 113.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 113.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 112.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 109.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 108.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 104.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 104.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 104.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 103.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 101.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 101.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 101.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 99.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 99.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 99.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 98.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 98.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 98.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 97.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 96.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 96.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 96.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 96.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 95.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 94.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 94.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 93.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 92.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 92.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 92.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 92.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 91.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 91.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 91.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 90.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 89.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 89.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 88.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 87.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 87.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 86.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 86.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 86.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 85.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 85.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 85.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 84.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 84.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 83.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 83.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 83.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 82.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 81.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 80.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 80.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 80.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 80.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 79.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 79.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 79.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 78.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 78.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 77.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 77.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 77.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 77.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 77.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 77.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 76.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 76.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 75.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 73.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 71.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 71.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 71.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 69.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 68.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 68.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 68.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 67.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 67.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 66.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 65.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 64.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 63.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 62.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 60.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 59.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 59.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 58.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 58.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 57.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 57.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 57.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 56.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 54.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 53.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 50.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 50.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 46.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 45.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 41.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 38.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 36.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 33.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 32.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 30.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 117.0
Samples: 246

Max nTPM: 1001.6
Min nTPM: 27.5
Std nTPM: 84.8
Median nTPM: 93.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1001.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 534.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 354.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 328.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 311.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 301.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 295.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 272.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 268.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 264.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 264.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 243.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 240.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 240.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 238.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 234.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 231.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 223.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 220.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 211.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 210.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 208.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 208.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 204.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 196.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 195.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 193.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 190.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 190.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 183.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 181.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 180.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 180.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 178.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 177.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 174.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 173.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 172.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 169.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 166.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 165.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 164.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 163.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 161.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 159.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 155.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 153.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 152.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 150.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 144.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 144.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 144.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 141.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 139.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 137.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 134.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 133.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 132.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 131.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 130.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 130.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 128.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 128.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 127.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 126.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 125.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 122.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 121.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 119.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 119.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 118.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 118.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 117.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 117.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 117.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 117.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 116.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 116.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 116.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 116.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 116.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 116.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 115.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 114.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 113.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 113.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 112.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 111.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 110.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 110.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 108.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 108.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 107.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 107.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 106.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 106.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 104.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 104.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 104.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 103.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 102.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 102.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 102.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 101.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 100.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 100.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 98.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 98.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 98.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 98.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 97.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 96.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 96.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 95.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 95.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 95.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 94.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 94.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 94.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 93.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 93.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 93.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 93.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 93.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 92.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 92.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 92.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 90.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 90.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 90.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 90.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 90.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 89.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 89.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 89.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 89.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 88.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 88.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 88.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 87.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 87.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 87.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 86.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 86.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 86.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 85.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 85.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 85.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 85.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 85.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 85.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 84.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 84.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 83.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 83.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 83.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 81.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 81.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 80.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 80.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 79.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 79.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 79.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 79.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 79.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 79.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 79.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 79.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 79.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 79.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 79.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 79.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 78.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 78.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 78.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 77.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 77.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 76.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 76.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 75.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 75.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 74.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 74.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 74.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 74.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 74.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 73.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 73.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 73.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 71.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 71.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 71.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 71.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 69.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 69.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 69.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 68.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 68.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 67.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 67.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 65.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 64.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 64.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 64.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 63.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 62.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 61.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 61.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 61.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 60.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 60.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 59.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 59.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 58.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 58.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 58.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 57.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 56.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 56.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 55.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 55.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 53.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 52.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 51.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 51.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 51.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 48.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 38.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 34.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 27.5
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Brain - Putamen (basal ganglia)
Average nTPM: 104.5
Samples: 205

Max nTPM: 314.6
Min nTPM: 32.3
Std nTPM: 47.3
Median nTPM: 92.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 314.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 265.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 262.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 262.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 244.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 231.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 217.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 216.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 198.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 198.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 195.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 190.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 190.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 185.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 185.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 177.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 177.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 171.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 168.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 167.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 166.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 160.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 158.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 154.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 154.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 154.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 153.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 152.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 152.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 151.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 150.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 148.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 147.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 145.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 142.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 141.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 140.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 140.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 140.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 139.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 137.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 137.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 136.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 135.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 135.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 134.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 134.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 133.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 133.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 131.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 130.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 128.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 127.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 126.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 126.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 124.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 124.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 122.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 122.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 122.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 120.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 118.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 118.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 117.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 117.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 116.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 115.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 113.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 113.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 113.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 112.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 110.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 108.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 108.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 108.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 105.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 105.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 105.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 104.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 103.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 103.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 102.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 102.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 101.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 101.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 101.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 100.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 100.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 100.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 100.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 99.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 97.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 97.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 97.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 95.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 95.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 95.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 95.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 93.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 93.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 92.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 92.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 92.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 91.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 91.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 90.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 88.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 88.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 87.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 86.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 85.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 85.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 85.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 85.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 84.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 84.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 83.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 83.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 83.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 82.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 82.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 82.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 81.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 81.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 81.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 81.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 80.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 78.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 78.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 77.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 77.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 76.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 76.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 75.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 74.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 74.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 74.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 73.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 73.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 73.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 73.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 73.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 73.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 72.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 72.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 72.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 72.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 71.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 71.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 70.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 69.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 68.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 67.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 67.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 66.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 66.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 66.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 65.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 64.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 63.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 62.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 61.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 61.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 60.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 60.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 58.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 54.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 54.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 54.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 54.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 51.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 51.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 44.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 43.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 41.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

141.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 129.8
FF:10164-103B2 76 years, female 129.8
Nucleus accumbens
Scaled Tags Per Million: 65.4
FF:10037-101F1 23-56 years, mixed 65.4
Putamen
Scaled Tags Per Million: 141.7
FF:10176-103C5 60 years, female 141.7
Globus pallidus
Scaled Tags Per Million: 95.1
FF:10175-103C4 60 years, female 120.8
FF:10161-103A8 76 years, female 69.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.8
Pig sample Sample description nTPM
Caudate
nTPM: 10.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.7
Sample A Female 11.0
Sample B Female 9.7
Sample C Male 11.2
Sample D Male 11.2
Putamen
nTPM: 14.9
Samples: 4

Max nTPM: 16.5
Min nTPM: 12.4
Sample A Female 16.0
Sample B Female 12.4
Sample C Male 16.5
Sample D Male 14.5
Septum
nTPM: 12.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 11.7
Sample C Male 12.9
Sample D Male 14.3
Ventral pallidum
nTPM: 12.7
Samples: 4

Max nTPM: 13.4
Min nTPM: 10.9
Sample A Female 10.9
Sample B Female 13.0
Sample C Male 13.4
Sample D Male 13.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 73.7
Samples: 4

Max nTPM: 78.6
Min nTPM: 65.2
Sample A Male 78.6
Sample B Male 77.6
Sample C Female 73.4
Sample D Female 65.2
Septum
nTPM: 63.2
Samples: 4

Max nTPM: 70.8
Min nTPM: 52.7
Sample A Male 52.7
Sample B Male 70.8
Sample C Female 67.3
Sample D Female 62.1
Ventral forebrain
nTPM: 65.8
Samples: 4

Max nTPM: 69.2
Min nTPM: 57.1
Sample A Male 68.5
Sample B Male 69.2
Sample C Female 68.3
Sample D Female 57.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
76003665 Antisense, RP_060608_03_A06, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
76003665 Antisense, RP_060608_03_A06, Mouse strain C57BL/6J (56 days, male) 0.2

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