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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:134.6 nTPM
GTEx:134.6 nTPM
FANTOM5:82.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB033879
Squamous epithelial cells Medium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 134.6
Samples: 156

Max nTPM: 456.0
Min nTPM: 13.7
Std nTPM: 90.5
Median nTPM: 109.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 456.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 435.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 400.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 385.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 357.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 341.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 337.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 332.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 326.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 323.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 310.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 305.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 298.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 258.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 257.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 249.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 248.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 245.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 242.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 239.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 236.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 235.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 234.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 230.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 223.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 223.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 221.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 220.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 215.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 212.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 209.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 207.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 204.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 202.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 189.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 185.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 177.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 176.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 170.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 166.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 164.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 162.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 161.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 160.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 158.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 157.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 155.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 154.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 153.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 153.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 153.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 150.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 149.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 146.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 144.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 140.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 139.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 138.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 138.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 137.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 136.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 134.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 133.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 131.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 130.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 125.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 125.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 122.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 122.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 122.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 120.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 120.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 116.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 115.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 114.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 112.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 111.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 110.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 109.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 108.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 108.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 108.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 105.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 103.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 99.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 98.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 97.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 96.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 95.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 94.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 91.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 91.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 90.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 89.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 89.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 88.7
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 88.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 88.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 86.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 84.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 83.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 83.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 83.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 83.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 82.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 81.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 81.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 81.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 80.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 80.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 80.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 79.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 78.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 78.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 77.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 76.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 74.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 72.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 72.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 72.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 71.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 69.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 69.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 67.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 66.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 66.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 64.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 62.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 61.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 60.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 60.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 59.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 58.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 52.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 51.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 49.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 48.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 39.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 39.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 38.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 37.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 36.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 36.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 33.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 32.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 28.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 28.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 28.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 27.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 25.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 22.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 21.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 21.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 18.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 15.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 13.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 82.1
FF:10204-103F6 68 years, female 82.1

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