We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
REEP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • REEP2
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: Medium
Purkinje cells: High
Mouse brain, Intensity
Cerebellumi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

145.787
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:124.7 nTPM
HPA Brain:124.3 nTPM
GTEx:124.7 nTPM
FANTOM5:169.3 Scaled Tags Per Million
Pig:101.5 nTPM
Mouse:110.4 nTPM
Allen mouse:12.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031813Antibody HPA076571
Purkinje cells HighHigh
Cells in granular layer MediumNot detected
Cells in molecular layer MediumNot detected




CEREBELLUM - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA076571
Cerebellum mean intensity 145.787
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Vestibulocerebellar nucleus -
Moleuclar layer of the cerebellum 66.043
Purkinje layer of the cerebellum 145.787
Granular layer of the cerebellum 33.528

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 121.2
2055 Female, age 91, right hemisphere 149.9
1769 Male, age 76, right hemisphere 143.3
2101 Male, age 74, right hemisphere 134.2
1774 Male, age 80, left hemisphere 128.5
2006 Male, age 61, right hemisphere 117.8
1768 Female, age 72, unknown 116.1
1788 Male, age 55, unknown 103.4
2003 Female, age 85, right hemisphere 76.7
Cerebellar nuclei
nTPM: 124.3
2177 Female, age 85, both hemispheres 201.9
2882 Male, age 76, left hemisphere 159.2
2783 Female, age 72, unknown 142.8
1966 Female, age 91, left hemisphere 136.4
1879 Male, age 55, unknown 129.1
2005 Male, age 80, left hemisphere 103.0
1871 Male, age 74, unknown 93.4
2175 Male, age 61, right hemisphere 92.5
2318 Male, age 74, left hemisphere 61.0
Flocculonodular lobe
nTPM: 119.7
2176 Female, age 91, right hemisphere 143.2
1792 Male, age 74, unknown 135.6
1771 Male, age 80, left hemisphere 130.4
1767 Male, age 76, left hemisphere 121.7
1835 Female, age 85, right hemisphere 118.4
2004 Male, age 61, right hemisphere 96.1
1765 Male, age 55, unknown 92.5
Vermis
nTPM: 122.8
1778 Female, age 91, left hemisphere 157.8
2834 Male, age 80, left hemisphere 142.7
1770 Male, age 76, left hemisphere 140.0
1751 Male, age 74, right hemisphere 127.8
1825 Male, age 74, unknown 122.3
1988 Female, age 85, left hemisphere 112.1
1928 Female, age 72, unknown 110.6
1766 Male, age 55, unknown 96.9
2460 Male, age 61, both hemispheres 94.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.7
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 110.3
Samples: 215

Max nTPM: 226.8
Min nTPM: 48.5
Std nTPM: 27.6
Median nTPM: 108.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 226.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 196.7
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 185.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 172.6
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 171.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 166.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 164.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 164.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 162.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 160.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 157.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 156.4
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 150.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 150.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 147.9
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 145.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 144.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 144.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 144.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 144.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 144.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 144.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 143.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 143.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 142.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 142.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 141.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 140.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 140.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 140.5
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 140.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 139.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 139.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 138.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 137.8
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 137.2
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 136.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 136.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 136.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 135.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 135.2
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 134.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 134.5
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 134.3
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 133.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 133.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 132.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 132.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 132.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 132.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 130.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 129.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 128.9
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 128.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 128.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 128.6
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 128.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 127.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 127.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 127.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 125.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 125.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 123.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 123.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 123.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 123.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 122.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 122.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 122.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 121.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 121.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 121.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 121.4
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 120.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 120.4
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 119.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 118.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 117.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 117.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 116.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 116.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 115.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 115.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 115.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 115.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 115.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 114.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 114.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 114.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 114.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 113.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 112.4
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 112.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 112.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 111.8
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 111.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 111.4
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 111.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 111.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 110.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 110.5
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 109.7
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 109.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 109.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 109.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 108.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 108.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 108.4
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 107.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 107.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 107.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 107.6
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 107.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 107.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 107.2
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 106.9
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 105.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 105.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 105.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 105.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 105.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 105.0
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 104.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 104.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 104.2
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 103.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 103.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 103.6
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 103.5
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 102.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 102.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 101.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 101.3
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 101.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 101.1
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 100.5
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 99.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 99.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 99.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 98.7
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 98.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 97.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 97.2
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 97.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 97.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 96.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 95.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 94.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 94.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 93.8
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 92.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 92.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 92.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 91.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 90.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 90.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 90.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 89.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 89.7
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 89.6
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 89.5
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 89.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 89.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 89.0
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 88.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 88.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 88.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 88.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 87.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 87.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 87.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 87.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 86.6
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 86.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 86.1
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 84.5
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 84.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 84.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 84.1
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 84.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 84.1
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 83.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 81.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 81.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 80.9
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 80.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 80.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 80.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 79.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 79.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 79.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 79.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 78.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 78.4
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 77.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 75.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 75.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 75.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 74.7
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 74.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 74.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 72.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 72.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 71.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 68.6
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 67.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 66.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 65.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 63.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 57.9
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 57.4
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 57.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 56.0
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 49.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 48.5
Show allShow less
Brain - Cerebellum
Average nTPM: 124.7
Samples: 241

Max nTPM: 199.2
Min nTPM: 47.6
Std nTPM: 27.4
Median nTPM: 128.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 199.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 198.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 180.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 177.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 177.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 175.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 169.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 168.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 164.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 164.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 164.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 163.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 163.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 163.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 163.1
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 162.8
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 162.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 162.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 160.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 160.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 159.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 158.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 158.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 157.3
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 156.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 156.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 155.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 155.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 153.4
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 153.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 152.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 151.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 151.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 150.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 150.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 150.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 150.0
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 149.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 149.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 149.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 149.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 148.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 148.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 148.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 148.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 148.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 147.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 147.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 147.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 146.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 146.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 146.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 146.3
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 146.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 145.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 145.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 145.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 145.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 145.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 145.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 144.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 144.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 144.2
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 143.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 143.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 143.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 143.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 142.7
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 142.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 141.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 141.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 141.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 140.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 140.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 139.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 139.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 139.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 139.0
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 138.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 137.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 137.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 137.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 137.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 137.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 137.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 136.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 136.3
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 136.0
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 136.0
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 135.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 135.8
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 135.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 135.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 135.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 135.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 135.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 134.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 134.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 134.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 134.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 134.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 133.6
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 133.6
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 133.4
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 133.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 132.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 132.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 132.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 132.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 132.0
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 131.8
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 131.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 130.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 130.9
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 130.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 129.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 129.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 129.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 129.0
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 128.7
GTEX-X261-3126-SM-4PQZC 50-59 years, male 128.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 128.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 127.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 127.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 127.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 127.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 126.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 126.1
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 126.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 125.9
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 125.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 125.5
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 125.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 125.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 125.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 124.7
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 124.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 123.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 123.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 122.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 121.9
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 121.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 121.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 121.6
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 120.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 120.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 119.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 119.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 119.0
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 118.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 118.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 118.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 118.0
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 118.0
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 117.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 117.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 117.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 116.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 116.2
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 115.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 115.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 114.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 114.7
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 114.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 114.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 112.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 112.3
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 111.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 111.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 110.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 110.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 109.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 109.2
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 108.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 108.5
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 108.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 106.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 106.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 105.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 104.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 104.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 104.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 104.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 104.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 104.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 103.9
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 103.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 103.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 102.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 102.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 102.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 102.4
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 101.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 101.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 101.5
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 101.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 100.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 100.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 100.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 99.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 97.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 97.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 96.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 96.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 94.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 94.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 93.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 92.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 90.5
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 90.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 90.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 89.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 89.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 89.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 88.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 88.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 88.3
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 87.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 85.7
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 84.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 83.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 83.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 82.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 82.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 81.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 79.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 78.2
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 76.5
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 76.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 75.4
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 72.4
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 71.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 70.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 68.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 66.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 63.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 58.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 56.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 55.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 50.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 47.6
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

169.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 169.3
FF:10083-102B2 22-68 years, mixed 234.8
FF:10166-103B4 76 years, female 103.9

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 101.5
Samples: 4

Max nTPM: 160.4
Min nTPM: 73.6
Sample A Female 160.4
Sample B Female 86.0
Sample C Male 73.6
Sample D Male 85.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
Mouse sample Sample description nTPM
Cerebellum
nTPM: 110.4
Samples: 4

Max nTPM: 124.1
Min nTPM: 94.3
Sample A Male 124.1
Sample B Male 94.3
Sample C Female 105.5
Sample D Female 117.8

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 12.2
583550 Antisense, RP_040831_02_G08, Mouse strain C57BL/6J (56 days, male) 12.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org