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PRMT7
HPA
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  • STRUCT & INT

  • PRMT7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PRMT7
Synonyms FLJ10640, KIAA1933
Gene descriptioni

Full gene name according to HGNC.

Protein arginine methyltransferase 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband q22.1
Chromosome location (bp) 68310951 - 68360852
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

13
Ensembl ENSG00000132600 (version 109)
Entrez gene 54496
HGNC HGNC:25557
UniProt Q9NVM4 (UniProt - Evidence at protein level)
neXtProt NX_Q9NVM4
GeneCards PRMT7
Antibodypedia PRMT7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being recruited by CTCFL at the H19 imprinted control region (ICR) and methylating histone H4 to form H4R3me2s, possibly leading to recruit DNA methyltransferases at these sites. May also play a role in embryonic stem cell (ESC) pluripotency. Also able to mediate the arginine methylation of histone H2A and myelin basic protein (MBP) in vitro; the relevance of such results is however unclear in vivo.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, Methyltransferase, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the protein arginine N-methyltransferase family of proteins. The encoded enzyme transfers single methyl groups to arginine residues to generate monomethylarginines on histone proteins as well as other protein substrates. This enzyme plays a role in a wide range of biological processes, including neuronal differentiation, male germ line imprinting, small nuclear ribonucleoprotein biogenesis, and regulation of the Wnt signaling pathway. Mutations in this gene underlie multiple related syndromes in human patients characterized by intellectual disability, short stature and other features. The encoded protein may promote breast cancer cell invasion and metastasis in human patients. [provided by RefSeq, May 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PRMT7-201
ENSP00000343103
ENST00000339507
Q9NVM4
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
A0A024R726
[Target identity:100%; Query identity:100%] Protein arginine N-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035243 [protein-arginine omega-N symmetric methyltransferase activity]
GO:0042393 [histone binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:0043393 [regulation of protein binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
692 aa
78.5 kDa
No 0
PRMT7-202
ENSP00000409324
ENST00000441236
Q9NVM4
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
A0A024R726
[Target identity:100%; Query identity:100%] Protein arginine N-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035243 [protein-arginine omega-N symmetric methyltransferase activity]
GO:0042393 [histone binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:0043393 [regulation of protein binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
692 aa
78.5 kDa
No 0
PRMT7-203
ENSP00000414716
ENST00000449359
Q9NVM4
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035243 [protein-arginine omega-N symmetric methyltransferase activity]
GO:0042393 [histone binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:0043393 [regulation of protein binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
642 aa
73.2 kDa
No 0
PRMT7-215
ENSP00000456190
ENST00000565745
H3BRD3
[Direct mapping] Protein arginine N-methyltransferase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
655 aa
73.9 kDa
No 0
PRMT7-225
ENSP00000456848
ENST00000569047
H3BSS9
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
169 aa
18.8 kDa
No 0
PRMT7-226
ENSP00000455538
ENST00000569571
H3BPZ8
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
223 aa
24.8 kDa
No 0
PRMT7-234
ENSP00000509003
ENST00000687558
Q9NVM4
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
A0A024R726
[Target identity:100%; Query identity:100%] Protein arginine N-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035243 [protein-arginine omega-N symmetric methyltransferase activity]
GO:0042393 [histone binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:0043393 [regulation of protein binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
692 aa
78.5 kDa
No 0
PRMT7-243
ENSP00000510167
ENST00000691663
A0A8I5QKZ3
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
594 aa
67.4 kDa
No 0
PRMT7-244
ENSP00000509455
ENST00000691804
A0A8I5KPT4
[Direct mapping] Protein arginine N-methyltransferase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
646 aa
73.1 kDa
No 0
PRMT7-246
ENSP00000510574
ENST00000691961
A0A8I5KZ05
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
618 aa
70.2 kDa
No 0
PRMT7-249
ENSP00000510669
ENST00000692632
A0A8I5KZ92
[Direct mapping] Protein arginine N-methyltransferase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
693 aa
78.5 kDa
No 0
PRMT7-250
ENSP00000510748
ENST00000692760
Q9NVM4
[Direct mapping] Protein arginine N-methyltransferase 7
Show all
A0A024R726
[Target identity:100%; Query identity:100%] Protein arginine N-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000387 [spliceosomal snRNP assembly]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0006349 [regulation of gene expression by genomic imprinting]
GO:0006479 [protein methylation]
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0030154 [cell differentiation]
GO:0032259 [methylation]
GO:0034969 [histone arginine methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035243 [protein-arginine omega-N symmetric methyltransferase activity]
GO:0042393 [histone binding]
GO:0043021 [ribonucleoprotein complex binding]
GO:0043393 [regulation of protein binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
Show all
692 aa
78.5 kDa
No 0
PRMT7-252
ENSP00000510428
ENST00000692966
H3BNC0
[Direct mapping] Protein arginine N-methyltransferase 7; Protein arginine methyltransferase 7, isoform CRA_e
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
567 aa
63.8 kDa
No 0

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