We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ALOX5AP
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ALOX5AP
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:11.8 nTPM
HPA Brain:11.6 nTPM
GTEx:11.8 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:8.6 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026592
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 8.7
2481 Female, age 94, left hemisphere 12.2
1781 Male, age 74, unknown 11.6
2846 Female, age 79, unknown 11.6
1857 Female, age 85, left hemisphere 10.5
1854 Male, age 80, left hemisphere 7.3
2289 Male, age 61, right hemisphere 6.0
2290 Female, age 72, unknown 5.9
2288 Male, age 75, left hemisphere 4.8
Globus pallidus, externus
nTPM: 11.6
2395 Male, age 75, both hemispheres 23.9
2772 Female, age 79, unknown 15.0
1996 Male, age 80, right hemisphere 11.9
2567 Female, age 72, unknown 5.2
2646 Male, age 61, right hemisphere 2.0
Globus pallidus, internus
nTPM: 9.2
2037 Male, age 80, right hemisphere 14.8
1818 Male, age 74, unknown 10.8
2778 Female, age 91, both hemispheres 10.4
2111 Female, age 85, right hemisphere 9.2
2566 Female, age 72, unknown 8.6
2483 Female, age 94, right hemisphere 6.9
2287 Male, age 75, right hemisphere 4.0
Nucleus accumbens
nTPM: 7.2
2732 Male, age 80, right hemisphere 9.8
2698 Female, age 72, unknown 9.4
2391 Female, age 94, left hemisphere 8.0
1806 Female, age 85, left hemisphere 7.9
1783 Male, age 74, unknown 7.7
1856 Female, age 91, right hemisphere 7.5
2286 Male, age 75, left hemisphere 5.7
2824 Male, age 61, right hemisphere 1.9
Nucleus basalis of Meynert
nTPM: 8.2
2821 Male, age 75, both hemispheres 12.6
2393 Male, age 80, right hemisphere 9.2
2484 Female, age 94, left hemisphere 9.0
2569 Male, age 61, both hemispheres 2.1
Nucleus of the diagonal band
nTPM: 6.0
1812 Female, age 91, both hemispheres 11.3
1979 Male, age 74, unknown 6.3
2775 Male, age 80, right hemisphere 5.3
2195 Female, age 85, both hemispheres 4.4
2029 Male, age 61, right hemisphere 2.5
Putamen
nTPM: 7.7
2482 Female, age 94, left hemisphere 17.6
2466 Female, age 79, unknown 8.8
1937 Female, age 91, right hemisphere 8.1
2489 Female, age 72, unknown 6.6
1829 Male, age 74, unknown 6.0
1838 Male, age 80, right hemisphere 5.3
2647 Male, age 75, left hemisphere 1.8
Septal nuclei
nTPM: 7.8
2199 Male, age 80, right hemisphere 13.2
2009 Female, age 91, both hemispheres 9.9
2394 Male, age 61, left hemisphere 7.3
2629 Female, age 94, right hemisphere 7.1
2031 Female, age 72, unknown 6.4
2059 Female, age 85, both hemispheres 5.7
1960 Male, age 74, unknown 5.2
Stria terminalis, bed nucleus
nTPM: 5.2
1974 Female, age 91, both hemispheres 6.2
2201 Male, age 74, unknown 5.3
2486 Female, age 94, both hemispheres 4.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 11.8
Samples: 246

Max nTPM: 49.5
Min nTPM: 1.1
Std nTPM: 10.7
Median nTPM: 7.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 49.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 46.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 46.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 44.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 41.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 41.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 38.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 37.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 37.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 33.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 33.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 32.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 32.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 31.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 31.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 29.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 29.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 28.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 28.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 28.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 25.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 24.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 24.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 23.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 23.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 22.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 22.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 21.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 21.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 19.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 18.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 18.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 18.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 17.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 16.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 16.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 16.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 15.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 15.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 15.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 15.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 15.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 15.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 15.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 15.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 15.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 15.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 14.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 14.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 14.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 14.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 13.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 13.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 13.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 13.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 12.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 12.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 12.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 11.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 11.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 11.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 11.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 11.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 10.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 10.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 10.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 10.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 10.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 10.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 10.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 10.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 10.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 10.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 10.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 10.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 9.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 9.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 9.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 9.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 9.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 9.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 9.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 9.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 8.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 8.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 8.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 8.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 8.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 8.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 7.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 7.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 7.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 7.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 7.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 7.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 7.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 7.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 7.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 6.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 6.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 6.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 6.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 6.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 6.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 6.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 6.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 6.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 6.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 6.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 6.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 5.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 5.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 5.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 5.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 5.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 5.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 5.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 5.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 5.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 5.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 5.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 5.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 4.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 4.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 4.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 4.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 4.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 4.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 4.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 4.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 4.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 4.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 4.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 4.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 4.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 4.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 4.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 4.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 3.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 3.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 3.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 3.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 3.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 3.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 3.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 3.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 3.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 3.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 2.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 2.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 2.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 2.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.5
Samples: 246

Max nTPM: 72.8
Min nTPM: 0.6
Std nTPM: 10.3
Median nTPM: 5.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 72.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 58.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 51.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 40.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 37.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 35.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 34.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 32.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 30.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 29.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 29.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 26.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 26.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 25.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 25.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 25.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 25.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 24.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 24.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 23.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 23.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 23.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 22.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 21.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 20.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 19.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 19.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 19.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 19.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 18.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 17.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 17.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 17.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 17.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 17.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 17.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 16.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 15.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 15.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 15.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 15.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 14.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 14.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 14.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 13.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 13.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 12.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 12.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 12.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 12.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 12.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 12.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 11.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 11.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 11.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 11.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 10.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 10.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 10.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 10.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 9.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 9.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 9.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 9.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 9.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 9.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 9.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 9.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 8.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 8.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 8.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 8.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 8.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 8.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 8.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 7.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 7.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 7.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 7.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 7.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 7.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 7.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 7.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 6.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 6.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 6.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 6.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 6.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 6.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 6.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 6.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 6.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 6.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 6.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 5.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 5.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 5.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 5.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 5.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 5.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 5.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 5.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 5.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 5.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 5.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 5.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 5.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 5.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 5.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 5.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 5.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 5.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 5.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 5.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 4.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 4.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 4.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 4.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 4.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 4.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 4.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 4.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 4.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 4.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 4.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 4.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 4.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 4.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 4.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 4.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 4.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 4.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 4.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 4.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 3.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 3.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 3.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 3.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 3.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 3.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 3.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 3.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 3.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 3.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 3.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 3.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 3.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 3.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 3.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 3.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 3.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 3.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 3.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 3.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 3.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 3.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 3.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 3.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 3.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 3.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 3.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 2.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 2.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 2.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 2.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 2.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 2.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 2.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 2.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 2.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 2.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 2.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 2.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 2.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 2.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 2.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 2.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 2.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 2.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 2.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 2.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 2.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 1.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 0.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 0.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 10.0
Samples: 205

Max nTPM: 57.1
Min nTPM: 0.7
Std nTPM: 9.5
Median nTPM: 6.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 57.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 42.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 41.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 39.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 39.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 37.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 37.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 35.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 34.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 33.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 27.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 26.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 25.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 23.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 21.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 20.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 19.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 19.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 19.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 18.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 18.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 18.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 18.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 18.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 17.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 17.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 16.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 16.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 15.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 15.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 15.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 15.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 15.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 14.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 13.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 13.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 13.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 13.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 12.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 12.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 11.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 10.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 10.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 10.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 10.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 9.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 9.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 9.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 9.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 9.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 9.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 8.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 8.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 8.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 8.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 7.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 7.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 7.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 7.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 6.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 6.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 6.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 6.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 6.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 6.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 6.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 6.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 6.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 6.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 6.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 6.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 6.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 6.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 5.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 5.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 5.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 5.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 5.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 5.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 5.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 5.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 5.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 5.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 5.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 5.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 4.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 4.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 4.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 4.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 4.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 4.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 4.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 4.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 4.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 4.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 4.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 4.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 3.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 3.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 3.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 3.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 3.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 3.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 3.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 3.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 3.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 3.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 2.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 2.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 2.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 2.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 2.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 2.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 2.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 2.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 2.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 0.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 47.1
FF:10164-103B2 76 years, female 47.1
Nucleus accumbens
Scaled Tags Per Million: 27.1
FF:10037-101F1 23-56 years, mixed 27.1
Putamen
Scaled Tags Per Million: 30.6
FF:10176-103C5 60 years, female 30.6
Globus pallidus
Scaled Tags Per Million: 72.3
FF:10161-103A8 76 years, female 91.3
FF:10175-103C4 60 years, female 53.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.8
Pig sample Sample description nTPM
Caudate
nTPM: 25.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 21.1
Sample A Female 26.4
Sample B Female 33.3
Sample C Male 22.9
Sample D Male 21.1
Putamen
nTPM: 30.7
Samples: 4

Max nTPM: 44.0
Min nTPM: 18.8
Sample A Female 44.0
Sample B Female 29.7
Sample C Male 18.8
Sample D Male 30.1
Septum
nTPM: 47.8
Samples: 4

Max nTPM: 57.5
Min nTPM: 41.2
Sample A Female 49.9
Sample B Female 41.2
Sample C Male 57.5
Sample D Male 42.6
Ventral pallidum
nTPM: 28.9
Samples: 4

Max nTPM: 33.1
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 29.9
Sample C Male 30.6
Sample D Male 33.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.0
Sample A Male 7.0
Sample B Male 9.0
Sample C Female 10.0
Sample D Female 8.5
Septum
nTPM: 6.0
Samples: 4

Max nTPM: 7.4
Min nTPM: 3.3
Sample A Male 3.3
Sample B Male 6.2
Sample C Female 7.4
Sample D Female 7.2
Ventral forebrain
nTPM: 7.1
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.4
Sample A Male 7.0
Sample B Male 6.6
Sample C Female 8.2
Sample D Female 6.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
68744534 Antisense, RP_050208_01_B01, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.2
68744534 Antisense, RP_050208_01_B01, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org