HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:32.3 nTPM
HPA Brain:59.0 nTPM
GTEx:32.3 nTPM
FANTOM5:80.7 Scaled Tags Per Million
Pig:76.1 nTPM
Mouse:158.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047016Antibody HPA051683
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.0
Sample id Sample description nTPM
Hippocampus
nTPM: 42.7
1898 Male, age 80, left hemisphere 54.8
2621 Female, age 67, right hemisphere 47.2
1855 Male, age 76, left hemisphere 46.3
1911 Female, age 85, right hemisphere 38.2
2148 Female, age 91, left hemisphere 37.7
2529 Female, age 94, left hemisphere 32.1
Dentate gyrus
nTPM: 46.0
1927 Female, age 91, both hemispheres 58.4
2010 Male, age 76, both hemispheres 50.8
2531 Female, age 67, both hemispheres 46.7
2530 Female, age 94, left hemisphere 46.4
2246 Female, age 85, both hemispheres 39.2
2528 Male, age 74, both hemispheres 34.3
Entorhinal gyrus
nTPM: 37.4
2613 Female, age 94, left hemisphere 51.4
2764 Male, age 80, right hemisphere 39.4
1938 Female, age 85, left hemisphere 38.5
1787 Male, age 76, left hemisphere 38.4
2686 Male, age 75, right hemisphere 33.8
2117 Female, age 91, right hemisphere 22.8
Hippocampus, CA1
nTPM: 59.0
2749 Male, age 80, left hemisphere 122.3
2045 Male, age 76, both hemispheres 56.3
1873 Female, age 85, both hemispheres 48.8
2527 Male, age 74, both hemispheres 37.0
2082 Female, age 91, right hemisphere 30.7
Hippocampus, CA2
nTPM: 40.2
1963 Male, age 80, left hemisphere 61.7
1892 Male, age 76, both hemispheres 59.8
2437 Female, age 94, left hemisphere 33.6
2249 Male, age 74, both hemispheres 31.3
2113 Female, age 91, right hemisphere 28.7
1940 Female, age 85, left hemisphere 26.0
Hippocampus, CA3
nTPM: 56.0
2137 Male, age 80, left hemisphere 115.4
1867 Male, age 76, both hemispheres 54.8
2620 Female, age 94, left hemisphere 54.8
2861 Female, age 67, both hemispheres 44.1
1891 Female, age 85, both hemispheres 35.0
2436 Male, age 74, both hemispheres 32.1
Parahippocampal cortex
nTPM: 36.9
1850 Male, age 80, both hemispheres 44.3
2245 Female, age 91, both hemispheres 43.7
2018 Male, age 76, both hemispheres 42.6
2693 Female, age 94, both hemispheres 41.1
2250 Female, age 67, right hemisphere 38.9
1933 Female, age 85, both hemispheres 35.4
2622 Female, age 67, right hemisphere 33.3
1990 Female, age 91, right hemisphere 32.8
2532 Female, age 72, left hemisphere 30.5
2692 Male, age 74, both hemispheres 26.2
Perirhinal gyrus
nTPM: 46.4
1847 Female, age 91, left hemisphere 52.9
1794 Male, age 80, right hemisphere 47.4
2521 Female, age 94, right hemisphere 46.1
2848 Male, age 76, right hemisphere 43.0
1841 Female, age 85, right hemisphere 42.7
Subiculum
nTPM: 37.6
1901 Male, age 80, both hemispheres 57.7
2042 Male, age 76, both hemispheres 44.6
1977 Female, age 85, both hemispheres 36.8
2438 Female, age 94, left hemisphere 32.5
2619 Male, age 74, both hemispheres 27.5
2729 Female, age 91, right hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 32.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.3
Samples: 197

Max nTPM: 102.9
Min nTPM: 6.6
Std nTPM: 19.0
Median nTPM: 28.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 102.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 96.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 91.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 82.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 80.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 77.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 76.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 75.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 70.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 80.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.7
FF:10169-103B7 60 years, female 116.3
FF:10153-102I9 76 years, female 45.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.1
Pig sample Sample description nTPM
Subiculum
nTPM: 59.0
Samples: 4

Max nTPM: 79.3
Min nTPM: 49.4
Sample A Female 79.3
Sample B Female 56.8
Sample C Male 50.5
Sample D Male 49.4
Dorsal hippocampus
nTPM: 76.1
Samples: 4

Max nTPM: 89.4
Min nTPM: 55.0
Sample A Female 89.4
Sample B Female 81.1
Sample C Male 78.9
Sample D Male 55.0
Entorhinal cortex
nTPM: 73.3
Samples: 4

Max nTPM: 80.6
Min nTPM: 61.7
Sample A Female 78.3
Sample B Female 80.6
Sample C Male 72.5
Sample D Male 61.7
Ventral hippocampus
nTPM: 59.7
Samples: 4

Max nTPM: 99.5
Min nTPM: 40.5
Sample A Female 40.5
Sample B Female 42.5
Sample C Male 56.2
Sample D Male 99.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 158.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.6
Samples: 4

Max nTPM: 123.9
Min nTPM: 119.0
Sample A Male 120.9
Sample B Male 123.9
Sample C Female 122.5
Sample D Female 119.0
Hippocampal formation
nTPM: 158.3
Samples: 4

Max nTPM: 176.7
Min nTPM: 135.2
Sample A Male 170.1
Sample B Male 151.3
Sample C Female 176.7
Sample D Female 135.2

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