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LARS1
HPA
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  • LARS1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

LARS1
Synonyms FLJ10595, FLJ21788, HSPC192, LARS, LEUS, RNTLS
Gene descriptioni

Full gene name according to HGNC.

Leucyl-tRNA synthetase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband q32
Chromosome location (bp) 146110566 - 146182696
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000133706 (version 109)
Entrez gene 51520
HGNC HGNC:6512
UniProt Q9P2J5 (UniProt - Evidence at protein level)
neXtProt NX_Q9P2J5
GeneCards LARS1
Antibodypedia LARS1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Aminoacyl-tRNA synthetase that catalyzes the specific attachment of leucine to its cognate tRNA (tRNA(Leu)) 1, 2. It performs tRNA aminoacylation in a two-step reaction: Leu is initially activated by ATP to form a leucyl-adenylate (Leu-AMP) intermediate; then the leucyl moiety is transferred to the acceptor 3' end of the tRNA to yield leucyl-tRNA 3. To improve the fidelity of catalytic reactions, it is also able to hydrolyze misactivated aminoacyl-adenylate intermediates (pre-transfer editing) and mischarged aminoacyl-tRNAs (post-transfer editing) 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Aminoacyl-tRNA synthetase, Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein biosynthesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a cytosolic leucine-tRNA synthetase, a member of the class I aminoacyl-tRNA synthetase family. The encoded enzyme catalyzes the ATP-dependent ligation of L-leucine to tRNA(Leu). It is found in the cytoplasm as part of a multisynthetase complex and interacts with the arginine tRNA synthetase through its C-terminal domain. A mutation in this gene was found in affected individuals with infantile liver failure syndrome 1. Alternatively spliced transcript variants of this gene have been observed. [provided by RefSeq, Dec 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
LARS1-201
ENSP00000274562
ENST00000274562
Q9P2J5
[Direct mapping] Leucine--tRNA ligase, cytoplasmic
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0008361 [regulation of cell size]
GO:0012505 [endomembrane system]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0032008 [positive regulation of TOR signaling]
GO:0034198 [cellular response to amino acid starvation]
GO:0043547 [positive regulation of GTPase activity]
GO:0071230 [cellular response to amino acid stimulus]
GO:0071233 [cellular response to leucine]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
GO:1904263 [positive regulation of TORC1 signaling]
GO:1990253 [cellular response to leucine starvation]
Show all
485 aa
55.3 kDa
No 0
LARS1-202
ENSP00000377954
ENST00000394434
Q9P2J5
[Direct mapping] Leucine--tRNA ligase, cytoplasmic
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0008361 [regulation of cell size]
GO:0012505 [endomembrane system]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0032008 [positive regulation of TOR signaling]
GO:0034198 [cellular response to amino acid starvation]
GO:0043547 [positive regulation of GTPase activity]
GO:0071230 [cellular response to amino acid stimulus]
GO:0071233 [cellular response to leucine]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
GO:1904263 [positive regulation of TORC1 signaling]
GO:1990253 [cellular response to leucine starvation]
Show all
1176 aa
134.5 kDa
No 0
LARS1-209
ENSP00000426005
ENST00000510191
Q9P2J5
[Direct mapping] Leucine--tRNA ligase, cytoplasmic
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0008361 [regulation of cell size]
GO:0012505 [endomembrane system]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0032008 [positive regulation of TOR signaling]
GO:0034198 [cellular response to amino acid starvation]
GO:0043547 [positive regulation of GTPase activity]
GO:0071230 [cellular response to amino acid stimulus]
GO:0071233 [cellular response to leucine]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
GO:1904263 [positive regulation of TORC1 signaling]
GO:1990253 [cellular response to leucine starvation]
Show all
1122 aa
128 kDa
No 0
LARS1-213
ENSP00000501474
ENST00000674158
A0A6I8PS05
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1049 aa
119.8 kDa
No 0
LARS1-215
ENSP00000501434
ENST00000674174
Q9P2J5
[Direct mapping] Leucine--tRNA ligase, cytoplasmic
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0008361 [regulation of cell size]
GO:0012505 [endomembrane system]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0032008 [positive regulation of TOR signaling]
GO:0034198 [cellular response to amino acid starvation]
GO:0043547 [positive regulation of GTPase activity]
GO:0071230 [cellular response to amino acid stimulus]
GO:0071233 [cellular response to leucine]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
GO:1904263 [positive regulation of TORC1 signaling]
GO:1990253 [cellular response to leucine starvation]
Show all
1122 aa
128 kDa
No 0
LARS1-217
ENSP00000501478
ENST00000674191
A0A6I8PLB3
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1024 aa
117.1 kDa
No 0
LARS1-219
ENSP00000501365
ENST00000674270
A0A6I8PL42
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1130 aa
129.2 kDa
No 0
LARS1-220
ENSP00000501510
ENST00000674277
A0A6I8PRS0
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1121 aa
127.9 kDa
No 0
LARS1-221
ENSP00000501435
ENST00000674290
A0A6I8PIT3
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1164 aa
133.1 kDa
No 0
LARS1-225
ENSP00000501476
ENST00000674398
A0A6I8PIV1
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1175 aa
134.3 kDa
No 0
LARS1-228
ENSP00000501376
ENST00000674447
B4DER1
[Direct mapping] Leucine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004823 [leucine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006399 [tRNA metabolic process]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006429 [leucyl-tRNA aminoacylation]
GO:0016604 [nuclear body]
GO:0016874 [ligase activity]
GO:0106074 [aminoacyl-tRNA metabolism involved in translational fidelity]
Show all
1149 aa
131.5 kDa
No 0

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