PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:415.1 nTPM
FANTOM5:531.3 Scaled Tags Per Million
Pig:126.3 nTPM
Mouse:235.7 nTPM
Allen mouse:11.1 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 415.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 236.0
2301 Female, age 85, both hemispheres 259.9
2188 Female, age 91, both hemispheres 254.2
2090 Male, age 80, both hemispheres 228.2
1984 Male, age 76, both hemispheres 201.9
Area postrema
nTPM: 273.1
2054 Male, age 76, both hemispheres 320.0
2799 Male, age 61, both hemispheres 290.9
2306 Male, age 80, both hemispheres 208.5
Dorsal cochlear nucleus
nTPM: 274.5
2187 Female, age 91, both hemispheres 301.5
2370 Male, age 61, both hemispheres 290.4
2058 Male, age 76, both hemispheres 274.5
2378 Male, age 80, both hemispheres 254.7
2802 Male, age 74, right hemisphere 251.5
Dorsal medullary reticular nucleus
nTPM: 299.0
2040 Female, age 85, both hemispheres 385.3
2373 Male, age 61, both hemispheres 276.3
2088 Male, age 76, both hemispheres 235.5
Dorsal motor vagal complex
nTPM: 297.6
2813 Female, age 72, unknown 370.2
2844 Male, age 55, unknown 369.0
2000 Male, age 74, unknown 340.1
2133 Female, age 91, both hemispheres 315.2
2797 Male, age 61, both hemispheres 265.1
2643 Male, age 74, both hemispheres 259.6
2185 Male, age 76, both hemispheres 238.2
2807 Female, age 85, both hemispheres 223.7
Dorsal tegmental nucleus
nTPM: 287.2
2083 Male, age 80, both hemispheres 311.4
2326 Male, age 74, both hemispheres 286.0
2358 Male, age 61, both hemispheres 280.7
1936 Male, age 76, left hemisphere 270.5
Dorsolateral tegmental area
nTPM: 311.0
2360 Male, age 74, both hemispheres 371.0
2654 Male, age 80, both hemispheres 312.3
2141 Male, age 76, both hemispheres 310.3
2751 Female, age 85, both hemispheres 305.3
2337 Male, age 61, both hemispheres 256.1
Gigantocellular reticular nuclei, medullary
nTPM: 284.9
1876 Female, age 85, both hemispheres 333.0
2462 Male, age 74, both hemispheres 297.3
2387 Female, age 91, both hemispheres 287.9
2022 Male, age 76, right hemisphere 271.0
2314 Male, age 61, both hemispheres 269.8
2310 Male, age 80, both hemispheres 250.7
Gigantocellular reticular nuclei, pars
nTPM: 264.3
2084 Female, age 85, both hemispheres 311.8
2336 Male, age 61, both hemispheres 290.0
2168 Male, age 76, both hemispheres 289.8
2706 Male, age 80, both hemispheres 223.9
2330 Male, age 80, both hemispheres 206.3
Inferior olive
nTPM: 285.0
2563 Male, age 74, both hemispheres 349.9
2628 Female, age 91, both hemispheres 283.7
2178 Male, age 61, both hemispheres 268.6
2379 Male, age 80, both hemispheres 266.2
2085 Female, age 85, both hemispheres 256.5
Kolliker-Fuse nucleus
nTPM: 287.8
2315 Male, age 76, right hemisphere 301.2
2163 Male, age 80, both hemispheres 300.3
2793 Female, age 91, left hemisphere 261.8
Lateral lemniscal nuclei
nTPM: 278.6
2036 Male, age 80, both hemispheres 332.7
2169 Male, age 76, both hemispheres 295.0
2746 Female, age 85, left hemisphere 287.2
2453 Male, age 74, right hemisphere 248.4
2320 Female, age 91, left hemisphere 229.8
Lateral medullary reticular nucleus
nTPM: 295.1
2305 Male, age 74, both hemispheres 344.7
2044 Male, age 76, both hemispheres 336.1
2374 Male, age 61, both hemispheres 279.0
2804 Female, age 91, both hemispheres 276.8
2190 Female, age 85, both hemispheres 269.3
2852 Male, age 80, both hemispheres 264.8
Lateral parabrachial nucleus
nTPM: 290.0
2139 Female, age 85, right hemisphere 313.8
2792 Male, age 76, both hemispheres 292.1
2013 Male, age 80, both hemispheres 290.1
2790 Male, age 61, both hemispheres 264.0
Lateral vestibular nucleus
nTPM: 279.7
2311 Male, age 80, both hemispheres 284.5
2184 Male, age 76, both hemispheres 274.8
Locus coeruleus
nTPM: 415.1
2014 Male, age 55, unknown 518.5
2123 Female, age 91, both hemispheres 462.2
2788 Male, age 74, unknown 441.3
2317 Female, age 72, unknown 388.1
1980 Male, age 76, both hemispheres 373.5
2720 Male, age 74, both hemispheres 367.9
2162 Male, age 80, both hemispheres 353.9
Medial olivary nucleus
nTPM: 277.7
2138 Female, age 91, both hemispheres 284.5
1962 Male, age 76, both hemispheres 280.1
2851 Male, age 80, both hemispheres 274.7
1943 Male, age 61, both hemispheres 271.6
Medial parabrachial nucleus
nTPM: 288.4
2170 Female, age 91, both hemispheres 345.7
2854 Male, age 80, both hemispheres 322.1
2786 Male, age 76, both hemispheres 285.1
2156 Male, age 61, both hemispheres 250.2
2463 Female, age 85, right hemisphere 239.0
Medial periolivary nuclei
nTPM: 273.7
2171 Female, age 85, both hemispheres 324.7
2791 Male, age 74, right hemisphere 314.0
2063 Male, age 76, both hemispheres 299.5
2081 Male, age 80, both hemispheres 226.0
2458 Female, age 91, both hemispheres 204.1
Medial vestibular nucleus
nTPM: 324.3
2801 Male, age 74, both hemispheres 388.7
2624 Male, age 61, both hemispheres 341.7
2134 Male, age 76, both hemispheres 317.6
2743 Female, age 85, both hemispheres 316.1
2803 Female, age 91, both hemispheres 313.4
2093 Male, age 80, both hemispheres 268.1
Motor facial nucleus
nTPM: 281.4
2365 Male, age 74, right hemisphere 346.3
2062 Male, age 76, both hemispheres 302.5
2126 Male, age 61, both hemispheres 276.0
2697 Female, age 85, both hemispheres 275.0
2327 Male, age 80, both hemispheres 244.6
2795 Female, age 91, both hemispheres 244.3
Motor hypoglossal nucleus
nTPM: 307.9
2461 Male, age 61, both hemispheres 317.8
2125 Female, age 91, both hemispheres 310.6
2182 Male, age 80, both hemispheres 306.3
2132 Female, age 85, both hemispheres 305.3
2277 Male, age 76, both hemispheres 299.7
Motor trigeminal nucleus
nTPM: 255.6
2335 Male, age 61, both hemispheres 276.9
2560 Male, age 74, both hemispheres 270.4
2309 Male, age 76, both hemispheres 262.1
2079 Male, age 80, both hemispheres 237.8
2321 Female, age 91, both hemispheres 230.7
Nuclei of the trapezoid body
nTPM: 280.6
2159 Male, age 61, both hemispheres 329.6
2735 Female, age 85, both hemispheres 319.4
1983 Male, age 76, both hemispheres 293.3
2166 Male, age 80, both hemispheres 237.0
2368 Female, age 91, both hemispheres 223.5
Nucleus ambiguus
nTPM: 258.3
2096 Female, age 85, both hemispheres 265.0
2071 Male, age 76, both hemispheres 251.7
Nucleus cuneatus
nTPM: 242.6
2562 Male, age 61, both hemispheres 306.7
2376 Male, age 61, both hemispheres 282.7
2564 Male, age 74, both hemispheres 276.3
2380 Male, age 80, both hemispheres 245.5
2381 Male, age 80, both hemispheres 237.6
2131 Male, age 76, both hemispheres 233.5
2808 Female, age 85, both hemispheres 221.4
2100 Male, age 76, both hemispheres 199.9
2805 Female, age 91, both hemispheres 180.1
Nucleus gracilis
nTPM: 258.1
2627 Male, age 74, both hemispheres 356.2
2382 Male, age 80, both hemispheres 224.9
2299 Female, age 85, both hemispheres 193.3
Nucleus raphe magnus
nTPM: 295.7
2160 Male, age 61, both hemispheres 369.7
2172 Female, age 85, both hemispheres 325.9
2455 Male, age 74, both hemispheres 298.3
2051 Male, age 76, both hemispheres 295.4
2328 Male, age 80, both hemispheres 246.0
2459 Female, age 91, both hemispheres 239.1
Nucleus raphe obscurus
nTPM: 273.3
2845 Female, age 85, midline 294.3
2800 Male, age 61, midline 279.1
2142 Male, age 76, midline 246.7
Nucleus raphe pallidus
nTPM: 313.6
2183 Male, age 80, midline 371.0
1924 Male, age 61, midline 317.7
2145 Male, age 76, midline 252.0
Nucleus tractus solitarii
nTPM: 321.0
2656 Male, age 76, both hemispheres 373.7
2144 Female, age 91, right hemisphere 359.3
2307 Male, age 80, both hemispheres 279.6
2191 Female, age 85, both hemispheres 271.6
Paramedian reticular nucleus
nTPM: 341.9
2050 Female, age 85, both hemispheres 367.5
2313 Male, age 61, both hemispheres 362.4
2052 Male, age 76, both hemispheres 319.6
2057 Male, age 80, both hemispheres 317.9
Parvicellular reticular nuclei
nTPM: 271.9
2119 Male, age 80, both hemispheres 305.9
2095 Male, age 76, both hemispheres 258.9
2558 Male, age 74, both hemispheres 250.8
Parvicellular reticular nuclei, medullary
nTPM: 294.7
2189 Female, age 91, both hemispheres 312.7
2181 Male, age 80, left hemisphere 294.0
2091 Female, age 85, both hemispheres 277.5
Pedunculopontine tegmental nucleus
nTPM: 319.7
2334 Male, age 80, both hemispheres 341.1
1921 Female, age 85, both hemispheres 340.9
2338 Male, age 61, both hemispheres 277.1
Peritrigeminal nucleus
nTPM: 294.3
2179 Male, age 61, both hemispheres 307.1
2136 Male, age 76, both hemispheres 289.8
2067 Female, age 85, both hemispheres 285.8
Pontine nuclei
nTPM: 303.1
1863 Male, age 55, unknown 364.5
2787 Female, age 85, both hemispheres 351.5
2727 Male, age 61, right hemisphere 321.8
2454 Male, age 74, left hemisphere 316.1
2109 Female, age 72, unknown 313.9
1968 Male, age 76, left hemisphere 266.0
2319 Female, age 91, both hemispheres 254.5
2115 Male, age 80, left hemisphere 236.5
Pontine raphe nucleus
nTPM: 351.8
2853 Male, age 76, midline 379.4
2122 Female, age 85, midline 324.1
Posteroventral cochlear nucleus
nTPM: 264.9
2752 Female, age 85, both hemispheres 306.6
2371 Male, age 61, both hemispheres 287.6
2070 Male, age 76, both hemispheres 276.4
2135 Female, age 91, both hemispheres 237.6
2341 Male, age 80, both hemispheres 216.3
Prepositus hypoglossal nucleus
nTPM: 287.9
2855 Female, age 85, right hemisphere 305.3
2086 Male, age 80, both hemispheres 270.4
Principal sensory trigeminal nucleus
nTPM: 282.4
2158 Male, age 61, both hemispheres 315.6
2008 Male, age 80, left hemisphere 293.1
2324 Male, age 76, both hemispheres 269.0
2367 Female, age 91, left hemisphere 252.0
Reticular pontine nucleus, caudal
nTPM: 249.0
2092 Male, age 76, both hemispheres 274.8
2559 Male, age 74, both hemispheres 265.7
2332 Male, age 80, right hemisphere 248.6
2457 Female, age 91, both hemispheres 207.0
Reticular pontine nucleus, oral
nTPM: 307.5
2012 Female, age 85, both hemispheres 338.9
2361 Male, age 74, both hemispheres 329.6
1939 Male, age 80, both hemispheres 322.8
2167 Male, age 76, both hemispheres 301.9
2366 Female, age 91, both hemispheres 244.5
Reticulotegmental nucleus
nTPM: 271.7
2325 Male, age 76, both hemispheres 306.8
2333 Male, age 80, both hemispheres 261.7
2322 Female, age 91, both hemispheres 259.4
2452 Male, age 74, both hemispheres 258.7
Spinal trigeminal nucleus, caudal
nTPM: 276.5
2390 Female, age 91, both hemispheres 334.0
2312 Male, age 61, both hemispheres 283.1
2642 Male, age 74, both hemispheres 268.4
2308 Male, age 80, both hemispheres 251.6
2447 Male, age 76, both hemispheres 245.5
Spinal trigeminal nucleus, interpolar
nTPM: 339.5
2625 Male, age 61, both hemispheres 391.3
2066 Male, age 76, right hemisphere 355.9
2033 Male, age 80, both hemispheres 346.7
2386 Female, age 85, both hemispheres 308.7
2389 Female, age 91, both hemispheres 295.2
Spinal trigeminal nucleus, oral
nTPM: 260.2
2737 Female, age 85, both hemispheres 277.5
2164 Male, age 80, both hemispheres 252.5
1978 Male, age 76, both hemispheres 250.5
Spinal vestibular nucleus
nTPM: 283.8
2186 Female, age 91, both hemispheres 300.6
2780 Male, age 80, both hemispheres 298.4
2806 Female, age 85, both hemispheres 295.5
2796 Male, age 61, both hemispheres 289.5
2748 Male, age 76, both hemispheres 269.9
2384 Male, age 74, both hemispheres 248.9
Subcoeruleus area
nTPM: 294.7
2323 Female, age 91, left hemisphere 352.3
1958 Male, age 80, both hemispheres 325.4
2369 Female, age 85, left hemisphere 305.2
2451 Male, age 74, both hemispheres 248.6
2089 Male, age 76, left hemisphere 242.1
Superior olive
nTPM: 291.5
2364 Male, age 74, right hemisphere 350.6
1875 Female, age 85, both hemispheres 349.9
2020 Male, age 76, both hemispheres 275.4
2329 Male, age 80, right hemisphere 253.3
2561 Female, age 91, both hemispheres 228.5
Superior vestibular nucleus
nTPM: 343.2
2383 Male, age 74, both hemispheres 443.5
2015 Male, age 80, both hemispheres 308.4
2061 Male, age 76, both hemispheres 277.6
Ventral medullary reticular nucleus
nTPM: 278.5
2060 Male, age 76, both hemispheres 280.1
2372 Male, age 61, both hemispheres 276.9
Ventral periolivary nuclei
nTPM: 286.3
2130 Female, age 85, both hemispheres 353.8
2165 Male, age 80, both hemispheres 288.7
2023 Male, age 76, both hemispheres 286.4
2794 Female, age 91, left hemisphere 216.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 278.9
2180 Male, age 61, both hemispheres 305.8
1986 Male, age 76, both hemispheres 303.8
2741 Female, age 85, both hemispheres 296.0
2302 Female, age 91, both hemispheres 265.7
2118 Male, age 80, both hemispheres 223.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 282.4
2840 Female, age 85, both hemispheres 338.2
2359 Male, age 61, both hemispheres 328.1
2449 Male, age 74, both hemispheres 275.2
1959 Male, age 76, both hemispheres 273.7
2161 Male, age 80, both hemispheres 256.0
2456 Female, age 91, both hemispheres 223.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 531.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 529.9
FF:10182-103D2 60 years, female 585.6
FF:10165-103B3 76 years, female 474.3
Medulla oblongata
Scaled Tags Per Million: 447.3
FF:10174-103C3 60 years, female 597.0
FF:10038-101F2 18-64 years, mixed 377.0
FF:10155-103A2 76 years, female 367.8
Pons
Scaled Tags Per Million: 531.3
FF:10033-101E6 18-54 years, mixed 531.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 126.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 115.5
Samples: 4

Max nTPM: 124.9
Min nTPM: 108.8
Sample A Female 108.8
Sample B Female 109.8
Sample C Male 118.6
Sample D Male 124.9
Pons
nTPM: 126.3
Samples: 4

Max nTPM: 139.4
Min nTPM: 111.5
Sample A Female 124.0
Sample B Female 130.4
Sample C Male 139.4
Sample D Male 111.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 235.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 235.8
Samples: 4

Max nTPM: 244.3
Min nTPM: 231.5
Sample A Male 233.0
Sample B Male 231.5
Sample C Female 244.3
Sample D Female 234.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 11.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 11.1
686217 Antisense, RP_040916_01_C03, Mouse strain C57BL/6J (56 days, male) 12.1
70743884 Antisense, RP_050725_01_H08, Mouse strain C57BL/6J (56 days, male) 10.2
Pons
Expression energy: 10.4
70743884 Antisense, RP_050725_01_H08, Mouse strain C57BL/6J (56 days, male) 11.1
686217 Antisense, RP_040916_01_C03, Mouse strain C57BL/6J (56 days, male) 9.7

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