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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
64.1
nTPM
HPA Brain:
52.4
nTPM
GTEx:
64.1
nTPM
FANTOM5:
79.0
Scaled Tags Per Million
Pig:
23.5
nTPM
Mouse:
85.2
nTPM
Allen mouse:
3.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.4
Sample id
Sample description
nTPM
Amygdala nTPM: 37.3
2517
Female, age 94, left hemisphere
46.3
1987
Female, age 91, left hemisphere
38.8
2695
Female, age 67, right hemisphere
37.4
2814
Male, age 76, right hemisphere
32.6
2514
Male, age 75, right hemisphere
31.4
Basal amygdala nTPM: 52.4
2243
Female, age 91, right hemisphere
59.9
2685
Female, age 94, left hemisphere
58.5
2110
Male, age 80, left hemisphere
56.0
2609
Male, age 75, right hemisphere
53.1
1955
Male, age 76, both hemispheres
43.7
2827
Female, age 67, right hemisphere
43.0
Central amygdala nTPM: 42.5
2826
Female, age 94, left hemisphere
54.5
2239
Male, age 80, left hemisphere
46.8
2515
Male, age 75, right hemisphere
44.4
2701
Female, age 91, right hemisphere
35.0
1905
Male, age 76, both hemispheres
31.7
Corticomedial amygdala nTPM: 51.8
2829
Male, age 80, left hemisphere
65.3
2535
Female, age 67, right hemisphere
56.5
2242
Female, age 91, right hemisphere
51.5
2429
Female, age 94, left hemisphere
48.5
2428
Male, age 75, right hemisphere
45.2
2240
Male, age 76, both hemispheres
43.7
Lateral amygdala nTPM: 45.5
2534
Female, age 94, left hemisphere
61.5
2516
Male, age 75, right hemisphere
49.4
2256
Male, age 80, left hemisphere
46.5
2830
Female, age 67, right hemisphere
40.5
2255
Female, age 91, right hemisphere
39.2
1883
Male, age 76, both hemispheres
36.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 64.1
Samples: 152
Max nTPM: 162.5
Min nTPM: 16.3
Std nTPM: 24.5
Median nTPM: 60.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
162.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
137.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
132.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
129.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
125.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
123.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
112.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
111.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
109.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
108.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
108.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
107.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
106.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
105.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
103.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
103.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
96.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
94.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
93.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
92.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
85.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
85.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
84.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
83.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
83.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
82.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
80.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
80.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
79.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
79.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
78.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
78.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
78.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
78.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
78.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
77.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
75.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
75.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
75.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
75.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
73.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
73.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
73.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
71.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
70.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
69.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
69.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
68.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
68.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
68.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
67.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
67.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
66.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
66.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
66.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
65.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
64.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
64.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
64.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
64.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
64.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
63.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
63.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
63.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
62.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
62.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
62.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
61.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
61.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
60.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
60.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
59.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
59.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
58.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
57.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
57.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
56.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
56.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
55.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
54.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
54.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
54.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
54.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
54.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
53.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
52.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
52.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
52.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
51.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
50.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
50.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
49.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
48.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
48.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
48.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
48.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
46.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
45.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
45.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
45.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
44.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
44.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
43.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
42.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
42.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
42.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
42.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
40.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
39.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
39.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
39.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
39.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
38.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
38.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
37.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
37.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
36.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
35.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
35.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
31.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
28.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
16.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 85.2
Samples: 4
Max nTPM: 92.9
Min nTPM: 80.8
Sample A
Male
84.5
Sample B
Male
92.9
Sample C
Female
80.8
Sample D
Female
82.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
