Expression of HMGCS2 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

HMGCS2 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 375.71

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

667.0

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	2894.7
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	2719.4
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	2695.0
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	2687.2
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	2499.8
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	2398.7
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	2326.2
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	2241.0
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	2082.8
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	2013.5
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	1967.2
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1958.6
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	1933.4
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	1925.1
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	1924.5
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	1851.9
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	1815.6
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	1758.3
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	1749.2
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	1716.0
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	1654.3
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	1644.0
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1584.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	1584.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	1581.7
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	1558.1
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	1557.5
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	1529.1
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	1507.1
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	1487.2
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	1472.5
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	1453.1
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	1442.7
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	1397.7
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	1385.4
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	1380.7
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	1380.5
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	1378.1
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	1374.7
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	1359.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	1349.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	1314.8
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	1314.8
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	1310.7
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	1291.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	1229.6
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	1188.3
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	1181.5
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	1140.3
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	1133.8
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	1126.0
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	1119.1
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	1108.7
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	1107.8
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	1099.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	1097.4
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	1094.9
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	1089.8
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	1089.5
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	1089.4
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	1083.4
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	1065.8
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	1054.0
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	1038.5
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	1031.7
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1031.3
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	1029.0
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	1028.5
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	1026.7
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	1021.7
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	1021.6
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	1020.7
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	1013.5
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1006.4
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	1002.9
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	1002.2
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	996.0
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	992.1
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	986.1
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	984.5
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	982.8
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	971.2
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	971.1
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	949.3
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	948.5
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	948.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	941.6
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	919.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	917.8
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	917.6
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	908.1
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	894.6
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	891.4
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	885.1
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	883.0
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	870.0
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	863.4
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	863.3
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	858.7
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	852.2
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	852.1
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	836.9
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	836.8
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	831.0
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	829.4
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	819.1
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	819.0
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	815.5
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	807.9
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	801.3
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	798.3
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	792.9
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	783.5
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	781.0
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	777.9
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	776.3
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	772.9
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	772.1
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	770.6
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	760.9
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	752.8
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	750.4
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	746.1
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	736.3
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	729.5
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	727.8
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	724.2
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	718.4
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	718.0
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	715.8
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	715.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	709.9
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	708.8
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	708.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	707.2
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	703.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	702.4
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	702.4
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	699.3
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	692.4
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	692.3
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	690.7
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	685.8
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	684.7
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	680.6
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	678.2
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	673.4
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	672.4
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	667.8
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	666.7
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	663.3
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	662.3
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	660.1
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	659.5
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	653.2
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	643.7
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	640.0
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	635.2
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	634.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	633.7
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	625.0
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	622.5
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	620.7
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	617.2
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	614.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	612.1
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	607.9
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	597.9
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	579.7
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	578.6
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	577.5
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	575.2
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	573.0
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	569.3
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	564.1
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	562.5
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	562.4
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	560.2
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	559.2
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	551.6
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	551.2
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	549.6
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	549.6
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	540.9
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	532.9
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	528.7
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	527.0
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	520.0
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	519.7
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	517.6
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	515.4
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	514.9
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	514.0
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	509.2
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	508.7
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	505.3
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	504.6
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	500.6
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	493.5
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	489.0
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	488.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	485.1
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	482.2
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	477.9
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	477.2
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	473.6
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	459.6
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	451.5
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	450.0
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	449.2
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	448.5
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	447.0
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	446.7
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	441.9
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	440.5
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	439.9
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	436.7
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	433.8
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	432.9
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	432.2
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	425.3
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	425.1
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	425.0
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	424.5
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	415.4
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	413.2
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	409.4
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	405.9
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	405.9
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	400.3
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	399.8
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	399.0
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	398.1
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	393.3
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	393.2
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	386.7
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	386.2
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	385.4
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	381.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	379.7
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	379.4
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	377.0
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	374.4
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	369.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	368.9
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	368.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	360.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	360.5
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	353.5
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	353.1
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	350.3
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	348.6
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	342.7
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	342.7
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	339.3
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	336.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	331.6
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	326.9
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	320.2
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	317.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	314.9
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	314.6
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	311.4
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	302.7
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	300.1
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	298.6
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	296.8
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	286.8
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	284.1
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	283.7
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	280.4
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	275.2
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	268.6
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	264.5
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	263.7
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	263.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	262.6
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	261.5
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	260.2
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	256.6
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	254.9
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	253.9
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	250.7
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	249.7
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	249.5
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	245.1
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	244.9
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	244.7
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	242.8
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	240.2
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	237.2
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	233.7
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	230.1
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	228.0
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	223.9
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	223.1
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	217.1
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	216.8
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	216.4
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	213.5
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	212.7
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	208.2
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	206.4
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	199.6
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	196.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	195.1
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	188.7
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	187.3
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	184.2
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	183.7
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	183.6
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	180.6
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	178.8
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	178.3
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	173.9
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	168.6
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	158.1
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	155.4
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	148.2
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	148.1
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	145.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	132.7
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	132.1
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	130.0
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	124.3
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	120.7
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	118.8
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	112.3
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	110.7
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	110.0
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	96.2
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	94.6
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	90.6
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	85.8
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	76.0
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	75.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	66.9
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	64.5
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	63.9
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	58.5
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	55.0
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	51.7
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	51.0
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	46.9
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	43.9
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	41.9
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	41.2
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	34.9
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	31.6
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	22.0
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	14.6
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	10.5
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	9.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	8.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	7.8
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	1.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	1.4
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	0.9
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	0.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	0.7
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	0.5
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	0.3
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

HMGCS2 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 532.13

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

816.8

Number of samples

231

Samples

Sample	Description	pTPM
DO45237	58 years, male, NA, stage:2, alive, 900 days	3975.8
DO45111	74 years, male, NA, stage:2, alive, 1590 days	3174.6
DO45121	61 years, male, NA, stage:3, alive, 1530 days	3034.8
DO45187	32 years, female, NA, stage:1, alive, 1260 days	2624.2
DO45107	63 years, female, NA, stage:2, alive, 1710 days	2454.1
DO23517	62 years, male, NA, stage:2, alive, 1200 days	2395.5
DO23532	71 years, female, NA, stage:1, alive, 960 days	2347.5
DO48674	80 years, male, NA, stage:2, alive, 1260 days	2135.0
DO227643	79 years, male, NA, stage:2, alive, 1260 days	2032.1
DO45096	69 years, male, NA, stage:2, dead, 1290 days	1895.5
DO45115	81 years, male, NA, stage:2, alive, 840 days	1892.0
DO48757	68 years, female, NA, stage:3, alive, 480 days	1830.1
DO48695	77 years, male, NA, stage:2, alive, 720 days	1828.6
DO23538	67 years, male, NA, stage:2, alive, 450 days	1826.2
DO48701	78 years, male, NA, stage:2, alive, 780 days	1821.5
DO48760	70 years, female, NA, stage:2, alive, 690 days	1796.8
DO45179	78 years, female, NA, stage:2, alive, 600 days	1736.9
DO50793	76 years, male, NA, stage:4, alive, 540 days	1732.8
DO23531	78 years, female, NA, stage:3, alive, 900 days	1729.2
DO48717	54 years, male, NA, stage:4, dead, 180 days	1678.5
DO23534	60 years, male, NA, stage:2, alive, 840 days	1657.7
DO23550	69 years, male, NA, stage:1, alive, 990 days	1643.3
DO23552	80 years, female, NA, stage:1, alive, 810 days	1629.0
DO50844	75 years, male, NA, stage:4, alive, 300 days	1625.4
DO45105	61 years, male, NA, stage:1, alive, 1680 days	1616.2
DO50817	75 years, male, NA, stage:2, alive, 390 days	1614.8
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1548.5
DO45091	56 years, male, NA, stage:2, dead, 1320 days	1537.0
DO45257	46 years, male, NA, stage:3, alive, 810 days	1529.1
DO45094	76 years, male, NA, stage:3, alive, 1650 days	1516.9
DO50814	83 years, male, NA, stage:3, alive, 420 days	1467.0
DO48761	55 years, male, NA, stage:2, alive, 870 days	1463.2
DO45125	58 years, male, NA, stage:3, alive, 1680 days	1453.9
DO45173	63 years, male, NA, stage:3, alive, 1170 days	1437.8
DO50774	68 years, female, NA, stage:2, alive, 720 days	1433.5
DO45227	57 years, female, NA, stage:2, alive, 1020 days	1430.3
DO23544	67 years, male, NA, stage:2, alive, 960 days	1397.1
DO23512	60 years, male, NA, stage:1, alive, 1260 days	1389.4
DO50799	66 years, female, NA, stage:2, alive, 540 days	1381.8
DO45101	63 years, male, NA, stage:2, alive, 1680 days	1365.7
DO45261	74 years, male, NA, stage:3, alive, 990 days	1325.4
DO48712	50 years, male, NA, stage:2, alive, 810 days	1312.0
DO45215	65 years, male, NA, stage:2, alive, 1170 days	1307.7
DO50816	63 years, male, NA, stage:2, alive, 390 days	1274.3
DO48716	71 years, male, NA, stage:2, alive, 720 days	1273.6
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1258.5
DO45263	67 years, male, NA, stage:3, dead, 270 days	1256.3
DO23518	67 years, male, NA, stage:2, alive, 1320 days	1250.7
DO50832	73 years, male, NA, stage:3, alive, 90 days	1246.3
DO45191	61 years, female, NA, stage:2, alive, 1200 days	1238.1
DO45113	58 years, male, NA, stage:3, alive, 1560 days	1236.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	1236.0
DO50803	62 years, female, NA, stage:1, alive, 540 days	1227.3
DO23545	67 years, male, NA, stage:2, dead, 570 days	1217.5
DO48743	69 years, female, NA, stage:2, alive, 570 days	1214.9
DO45247	31 years, female, NA, stage:2, alive, 210 days	1205.8
DO48721	58 years, female, NA, stage:1, alive, 900 days	1191.6
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1183.8
DO45181	84 years, female, NA, stage:2, alive, 1200 days	1181.4
DO45123	78 years, female, NA, stage:2, dead, 570 days	1168.7
DO45131	53 years, male, NA, stage:4, dead, 360 days	1160.3
DO45141	73 years, male, NA, stage:2, alive, 1320 days	1146.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	1138.9
DO45233	83 years, male, NA, stage:3, alive, 900 days	1123.3
DO23537	79 years, male, NA, stage:2, dead, 900 days	1097.4
DO48715	58 years, female, NA, stage:2, dead, 690 days	1057.8
DO45171	56 years, male, NA, stage:3, alive, 600 days	1052.2
DO23551	73 years, male, NA, stage:3, dead, 150 days	1044.3
DO45195	62 years, male, NA, stage:1, alive, 390 days	1043.4
DO45109	63 years, male, NA, stage:2, alive, 1590 days	1028.2
DO50776	75 years, male, NA, stage:1, alive, 690 days	1003.5
DO50818	65 years, male, NA, stage:2, alive, 510 days	1000.4
DO48672	81 years, male, NA, stage:2, alive, 450 days	996.3
DO50859	77 years, male, NA, stage:2, alive, 180 days	992.4
DO45281	83 years, male, NA, stage:4, alive, 750 days	990.3
DO50789	73 years, female, NA, stage:2, alive, 570 days	987.4
DO45197	51 years, male, NA, stage:2, alive, 1170 days	960.7
DO50857	72 years, male, NA, stage:2, alive, 210 days	920.1
DO48725	66 years, male, NA, stage:1, alive, 780 days	907.3
DO23521	63 years, male, NA, stage:3, alive, 1110 days	903.4
DO45201	49 years, male, NA, stage:1, alive, 900 days	897.5
DO45207	68 years, male, NA, stage:1, alive, 1050 days	890.9
DO45159	65 years, male, NA, stage:3, alive, 1470 days	890.8
DO45253	50 years, male, NA, stage:2, alive, 870 days	890.0
DO50798	77 years, male, NA, stage:3, dead, 30 days	886.7
DO50804	81 years, male, NA, stage:2, alive, 720 days	883.7
DO48719	80 years, male, NA, stage:2, alive, 690 days	881.2
DO50819	72 years, female, NA, stage:2, alive, 510 days	878.8
DO23527	72 years, male, NA, stage:1, alive, 1050 days	877.4
DO48759	73 years, male, NA, stage:3, alive, 720 days	866.0
DO45133	64 years, male, NA, stage:3, dead, 660 days	855.5
DO48742	76 years, male, NA, stage:2, alive, 600 days	854.8
DO45273	62 years, male, NA, stage:2, alive, 480 days	847.1
DO23543	63 years, male, NA, stage:2, alive, 1020 days	846.1
DO50809	56 years, male, NA, stage:3, dead, 720 days	843.3
DO45235	68 years, female, NA, stage:1, alive, 900 days	838.6
DO45219	78 years, male, NA, stage:2, alive, 1080 days	826.8
DO45213	58 years, male, NA, stage:1, alive, 1200 days	826.4
DO45167	67 years, male, NA, stage:2, dead, 1440 days	822.0
DO23515	71 years, male, NA, stage:2, alive, 1230 days	821.1
DO45099	46 years, male, NA, stage:3, alive, 1590 days	820.4
DO50802	49 years, male, NA, stage:2, alive, 930 days	815.9
DO48700	78 years, female, NA, stage:2, alive, 810 days	813.4
DO48706	72 years, male, NA, stage:2, alive, 870 days	812.3
DO48741	64 years, male, NA, stage:3, alive, 240 days	812.0
DO45221	75 years, female, NA, stage:4, dead, 390 days	805.8
DO23510	80 years, female, NA, stage:2, alive, 870 days	799.7
DO45203	71 years, female, NA, stage:2, alive, 1170 days	792.5
DO48746	76 years, male, NA, stage:3, alive, 570 days	786.7
DO50783	62 years, male, NA, stage:3, alive, 480 days	763.2
DO45135	77 years, male, NA, stage:1, alive, 1410 days	758.9
DO45129	61 years, male, NA, stage:3, alive, 1470 days	758.6
DO48733	72 years, male, NA, stage:2, alive, 600 days	758.0
DO23542	66 years, male, NA, stage:3, alive, 960 days	758.0
DO23509	60 years, male, NA, stage:3, dead, 780 days	752.5
DO23541	65 years, male, NA, stage:2, alive, 930 days	748.0
DO23528	45 years, female, NA, stage:2, alive, 1020 days	718.5
DO45155	69 years, male, NA, stage:2, alive, 2160 days	700.8
DO23524	71 years, female, NA, stage:2, alive, 1050 days	700.2
DO48682	72 years, female, NA, stage:3, dead, 120 days	693.5
DO50813	56 years, male, NA, stage:2, alive, 420 days	682.4
DO23513	76 years, male, NA, stage:3, alive, 1200 days	665.1
DO50820	77 years, female, NA, stage:3, alive, 510 days	664.0
DO23508	79 years, female, NA, stage:2, alive, 390 days	657.3
DO45231	84 years, male, NA, stage:2, alive, 930 days	650.2
DO45149	70 years, female, NA, stage:2, alive, 1260 days	642.7
DO48732	73 years, male, NA, stage:3, alive, 630 days	640.4
DO45153	77 years, female, NA, stage:2, alive, 1380 days	635.8
DO50787	63 years, male, NA, stage:3, alive, 480 days	634.4
DO23536	56 years, male, NA, stage:2, alive, 930 days	631.8
DO23540	73 years, male, NA, stage:1, alive, 750 days	627.5
DO50807	67 years, male, NA, stage:1, alive, 540 days	624.9
DO48704	68 years, female, NA, stage:3, alive, 750 days	602.3
DO23533	61 years, male, NA, stage:2, alive, 900 days	598.9
DO50845	72 years, male, NA, stage:3, alive, 210 days	597.9
DO23526	66 years, male, NA, stage:3, alive, 1050 days	589.1
DO50811	62 years, male, NA, stage:1, alive, 450 days	589.1
DO23546	63 years, male, NA, stage:2, alive, 1050 days	582.1
DO50855	47 years, male, NA, stage:2, alive, 570 days	581.8
DO45143	69 years, male, NA, stage:3, alive, 1290 days	578.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	575.6
DO45157	62 years, male, NA, stage:2, alive, 1980 days	574.4
DO50800	74 years, male, NA, stage:2, alive, 510 days	569.0
DO50840	49 years, male, NA, stage:2, alive, 330 days	568.7
DO50825	70 years, male, NA, stage:2, alive, 390 days	557.2
DO45229	74 years, male, NA, stage:1, alive, 990 days	550.9
DO50785	37 years, male, NA, stage:4, dead, 90 days	545.0
DO23548	78 years, female, NA, stage:1, alive, 840 days	539.0
DO23535	67 years, male, NA, stage:1, alive, 960 days	535.4
DO45225	69 years, male, NA, stage:1, alive, 1050 days	535.2
DO227801	77 years, female, NA, stage:1, alive, 660 days	532.8
DO50808	68 years, male, NA, stage:2, alive, 570 days	532.1
DO50791	79 years, female, NA, stage:1, dead, 480 days	530.6
DO48736	76 years, female, NA, stage:1, alive, 600 days	525.4
DO50806	70 years, male, NA, stage:4, alive, 540 days	499.6
DO50850	74 years, male, NA, stage:3, alive, 720 days	492.3
DO45205	67 years, female, NA, stage:2, dead, 90 days	489.2
DO45165	75 years, male, NA, stage:2, alive, 690 days	479.0
DO45161	74 years, male, NA, stage:2, dead, 540 days	474.5
DO45243	74 years, female, NA, stage:3, alive, 930 days	468.6
DO48730	73 years, female, NA, stage:2, alive, 630 days	458.2
DO45199	86 years, female, NA, stage:2, alive, 1350 days	444.5
DO45097	69 years, male, NA, stage:3, alive, 1620 days	440.2
DO48677	58 years, male, NA, stage:3, alive, 1140 days	436.5
DO48727	81 years, female, NA, stage:2, dead, 390 days	429.5
DO45092	62 years, male, NA, stage:4, dead, 1200 days	425.7
DO23511	83 years, female, NA, stage:3, dead, 180 days	421.0
DO48723	73 years, male, NA, stage:1, alive, 600 days	411.3
DO48681	57 years, male, NA, stage:2, alive, 900 days	390.7
DO45209	70 years, male, NA, stage:4, alive, 1350 days	386.4
DO23525	71 years, male, NA, stage:4, alive, 1050 days	376.9
DO45169	74 years, male, NA, stage:3, alive, 1350 days	376.8
DO45269	59 years, male, NA, stage:3, alive, 750 days	371.5
DO23514	64 years, male, NA, stage:2, alive, 1290 days	371.2
DO45119	74 years, male, NA, stage:3, dead, 510 days	363.0
DO45093	71 years, male, NA, stage:2, dead, 720 days	353.2
DO48693	71 years, male, NA, stage:2, alive, 900 days	349.2
DO23539	77 years, male, NA, stage:1, alive, 1110 days	335.8
DO45137	38 years, male, NA, stage:1, alive, 1320 days	334.5
DO50839	47 years, female, NA, stage:3, alive, 330 days	330.4
DO48679	72 years, male, NA, stage:2, alive, 1200 days	322.2
DO50778	60 years, male, NA, stage:4, alive, 630 days	317.0
DO45095	66 years, male, NA, stage:2, alive, 1620 days	310.9
DO48728	74 years, female, NA, stage:2, alive, 150 days	299.6
DO45183	72 years, female, NA, stage:2, dead, 570 days	280.6
DO48720	62 years, female, NA, stage:2, alive, 570 days	273.4
DO45255	81 years, male, NA, stage:3, alive, 720 days	273.1
DO45139	63 years, male, NA, stage:3, alive, 1320 days	271.5
DO50805	72 years, male, NA, stage:2, alive, 690 days	267.8
DO48697	64 years, female, NA, stage:2, dead, 810 days	252.3
DO45267	73 years, male, NA, stage:3, dead, 570 days	246.8
DO45241	49 years, male, NA, stage:1, alive, 1080 days	236.2
DO45175	74 years, male, NA, stage:2, alive, 1140 days	200.2
DO45103	47 years, male, NA, stage:3, alive, 450 days	194.7
DO23530	53 years, male, NA, stage:4, dead, 180 days	186.0
DO45239	42 years, male, NA, stage:2, alive, 870 days	185.3
DO45163	76 years, male, NA, stage:2, alive, 960 days	172.5
DO50822	66 years, male, NA, stage:2, alive, 510 days	171.1
DO45217	69 years, female, NA, stage:3, dead, 270 days	164.3
DO48737	52 years, male, NA, stage:1, alive, 720 days	155.4
DO45189	85 years, female, NA, stage:2, alive, 1200 days	152.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	123.2
DO45275	65 years, male, NA, stage:3, dead, 10 days	113.3
DO23519	65 years, male, NA, stage:3, alive, 630 days	98.7
DO45185	89 years, male, NA, stage:2, alive, 600 days	97.4
DO45249	57 years, male, NA, stage:1, alive, 630 days	66.6
DO50829	78 years, male, NA, stage:3, alive, 570 days	54.1
DO48747	62 years, male, NA, stage:3, alive, 540 days	48.0
DO23547	74 years, male, NA, stage:1, alive, 1020 days	38.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	32.1
DO45127	73 years, male, NA, stage:3, dead, 420 days	30.5
DO45259	65 years, male, NA, stage:3, alive, 330 days	25.6
DO45301	56 years, male, NA, stage:2, dead, 1440 days	23.8
DO48751	68 years, male, NA, stage:2, dead, 480 days	23.0
DO45145	78 years, male, NA, stage:3, dead, 60 days	18.0
DO45287	74 years, male, NA, stage:1, alive, 390 days	16.8
DO23529	72 years, male, NA, stage:4, alive, 930 days	12.8
DO45305	66 years, male, NA, stage:4, alive, 300 days	9.0
DO45245	75 years, female, NA, stage:2, dead, 240 days	5.9
DO23549	74 years, male, NA, stage:3, alive, 990 days	4.4
DO45297	61 years, female, NA, stage:4, dead, 1260 days	4.4
DO45283	60 years, male, NA, stage:3, alive, 510 days	4.1
DO45277	64 years, male, NA, stage:3, alive, 600 days	3.8
DO45279	67 years, male, NA, stage:3, alive, 1290 days	3.5
DO45289	78 years, female, NA, stage:3, alive, 360 days	2.1
DO45303	62 years, female, NA, stage:3, alive, 990 days	1.1
DO45285	59 years, male, NA, stage:3, alive, 480 days	0.9
DO23523	52 years, male, NA, stage:3, alive, 1080 days	0.7
DO45211	76 years, male, NA, stage:3, alive, 240 days	0.4
DO45307	54 years, female, NA, stage:4, dead, 240 days	0.4
DO45299	70 years, female, NA, stage:1, alive, 1440 days	0.3
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
571	Tumor	1.3
1043	Tumor	1.2
465	Tumor	1.0
332	Normal	0.9
436	Normal	0.8
695	Tumor	0.8
393	Tumor	0.8
186	Normal	0.8
443	Tumor	0.7
162	Normal	0.7
446	Normal	0.7
698	Normal	0.7
742	Normal	0.7
196	Normal	0.7
128	Normal	0.7
818	Normal	0.7
488	Normal	0.7
222	Normal	0.7
342	Normal	0.7
938	Normal	0.7
428	Normal	0.7
882	Normal	0.7
636	Normal	0.7
615	Tumor	0.7
411	Tumor	0.7
858	Normal	0.6
568	Normal	0.6
745	Tumor	0.6
452	Normal	0.6
376	Normal	0.6
394	Normal	0.6
862	Normal	0.6
824	Normal	0.6
618	Normal	0.6
666	Normal	0.6
462	Normal	0.6
132	Normal	0.6
982	Normal	0.6
1046	Normal	0.6
924	Normal	0.6
172	Normal	0.6
298	Normal	0.6
412	Normal	0.6
534	Normal	0.5
912	Normal	0.5
1032	Normal	0.5
358	Normal	0.5
314	Normal	0.5
472	Normal	0.5
414	Normal	0.5
746	Normal	0.5
964	Normal	0.5
922	Normal	0.5
484	Normal	0.5
356	Normal	0.5
756	Normal	0.5
464	Normal	0.5
426	Normal	0.5
424	Normal	0.5
786	Normal	0.4
487	Tumor	0.4
423	Tumor	0.4
984	Normal	0.4
921	Tumor	0.4
258	Normal	0.4
278	Normal	0.4
1016	Normal	0.4
1014	Normal	0.4
365	Tumor	0.4
286	Normal	0.4
546	Normal	0.4
628	Normal	0.4
127	Tumor	0.4
564	Normal	0.4
648	Normal	0.4
111	Normal	0.4
744	Normal	0.4
432	Normal	0.4
344	Normal	0.4
868	Normal	0.4
866	Normal	0.4
738	Normal	0.4
466	Normal	0.4
388	Normal	0.3
1026	Normal	0.3
482	Normal	0.3
864	Normal	0.3
572	Normal	0.3
396	Normal	0.3
136	Normal	0.3
148	Normal	0.3
341	Tumor	0.3
664	Normal	0.3
716	Normal	0.3
422	Normal	0.3
232	Normal	0.3
714	Normal	0.3
1027	Tumor	0.3
147	Tumor	0.3
142	Normal	0.3
354	Normal	0.3
221	Tumor	0.3
231	Tumor	0.3
352	Normal	0.3
914	Normal	0.3
816	Normal	0.3
146	Normal	0.3
518	Normal	0.3
328	Normal	0.3
926	Normal	0.3
368	Normal	0.3
955	Tumor	0.3
686	Normal	0.3
214	Normal	0.3
616	Normal	0.3
435	Tumor	0.2
878	Normal	0.2
124	Normal	0.2
944	Normal	0.2
364	Normal	0.2
1022	Normal	0.2
513	Tumor	0.2
528	Normal	0.2
778	Normal	0.2
723	Tumor	0.2
218	Normal	0.2
114	Normal	0.2
918	Normal	0.2
526	Normal	0.2
873	Tumor	0.2
456	Normal	0.2
722	Normal	0.2
957	Tumor	0.2
366	Normal	0.2
672	Normal	0.2
448	Normal	0.2
138	Normal	0.2
112	Tumor	0.2
884	Normal	0.2
727	Tumor	0.2
392	Normal	0.2
976	Normal	0.2
1044	Normal	0.1
642	Normal	0.1
171	Tumor	0.1
494	Normal	0.1
553	Tumor	0.1
468	Normal	0.1
262	Normal	0.1
126	Normal	0.1
713	Tumor	0.1
978	Normal	0.1
1042	Normal	0.1
968	Normal	0.1
514	Normal	0.1
874	Normal	0.1
958	Normal	0.1
696	Normal	0.1
425	Tumor	0.1
627	Tumor	0.1
327	Tumor	0.1
481	Tumor	0.0
952	Normal	0.0
1031	Tumor	0.0
477	Tumor	0.0
271	Tumor	0.0
362	Normal	0.0
554	Normal	0.0
662	Normal	0.0
728	Normal	0.0
966	Normal	0.0
145	Tumor	0.0
474	Normal	0.0
416	Normal	0.0
755	Tumor	-0.1
954	Normal	-0.1
272	Normal	-0.1
161	Tumor	-0.1
312	Normal	-0.1
361	Tumor	-0.1
574	Normal	-0.1
558	Normal	-0.1
228	Normal	-0.1
956	Normal	-0.1
212	Normal	-0.1
516	Normal	-0.1
852	Normal	-0.1
386	Normal	-0.1
647	Tumor	-0.1
883	Tumor	-0.1
563	Tumor	-0.2
1028	Normal	-0.2
191	Tumor	-0.2
538	Normal	-0.2
641	Tumor	-0.2
515	Tumor	-0.2
434	Normal	-0.2
123	Tumor	-0.2
415	Tumor	-0.2
195	Tumor	-0.3
1045	Tumor	-0.3
421	Tumor	-0.3
137	Tumor	-0.3
224	Normal	-0.3
284	Normal	-0.3
777	Tumor	-0.3
384	Normal	-0.3
192	Normal	-0.3
187	Tumor	-0.3
963	Tumor	-0.4
617	Tumor	-0.4
261	Tumor	-0.4
267	Tumor	-0.4
916	Normal	-0.4
925	Tumor	-0.4
721	Tumor	-0.4
357	Tumor	-0.4
188	Normal	-0.4
471	Tumor	-0.4
857	Tumor	-0.4
463	Tumor	-0.5
478	Normal	-0.5
1025	Tumor	-0.5
461	Tumor	-0.5
217	Tumor	-0.5
353	Tumor	-0.5
498	Normal	-0.5
851	Tumor	-0.5
863	Tumor	-0.6
663	Tumor	-0.6
444	Normal	-0.6
813	Tumor	-0.6
223	Tumor	-0.6
915	Tumor	-0.6
923	Tumor	-0.6
268	Normal	-0.6
227	Tumor	-0.6
937	Tumor	-0.6
383	Tumor	-0.6
433	Tumor	-0.6
185	Tumor	-0.6
313	Tumor	-0.6
524	Normal	-0.6
967	Tumor	-0.6
536	Normal	-0.6
537	Tumor	-0.6
483	Tumor	-0.7
865	Tumor	-0.7
741	Tumor	-0.7
363	Tumor	-0.7
517	Tumor	-0.7
257	Tumor	-0.7
635	Tumor	-0.7
391	Tumor	-0.7
431	Tumor	-0.7
785	Tumor	-0.7
817	Tumor	-0.7
697	Tumor	-0.7
975	Tumor	-0.7
113	Tumor	-0.8
492	Normal	-0.8
141	Tumor	-0.8
737	Tumor	-0.8
355	Tumor	-0.8
867	Tumor	-0.9
445	Tumor	-0.9
573	Tumor	-0.9
427	Tumor	-0.9
297	Tumor	-0.9
413	Tumor	-0.9
387	Tumor	-1.0
823	Tumor	-1.0
953	Tumor	-1.0
1013	Tumor	-1.0
943	Tumor	-1.0
493	Tumor	-1.0
814	Normal	-1.0
913	Tumor	-1.0
367	Tumor	-1.1
715	Tumor	-1.1
497	Tumor	-1.1
535	Tumor	-1.1
277	Tumor	-1.1
131	Tumor	-1.1
467	Tumor	-1.2
523	Tumor	-1.2
135	Tumor	-1.2
125	Tumor	-1.2
567	Tumor	-1.2
1021	Tumor	-1.3
981	Tumor	-1.3
527	Tumor	-1.3
977	Tumor	-1.3
724	Normal	-1.3
533	Tumor	-1.3
455	Tumor	-1.4
1041	Tumor	-1.4
951	Tumor	-1.4
877	Tumor	-1.4
451	Tumor	-1.4
917	Tumor	-1.4
343	Tumor	-1.4
447	Tumor	-1.5
1015	Tumor	-1.5
743	Tumor	-1.5
525	Tumor	-1.5
881	Tumor	-1.5
665	Tumor	-1.5
395	Tumor	-1.6
557	Tumor	-1.6
473	Tumor	-1.6
965	Tumor	-1.6
685	Tumor	-1.6
213	Tumor	-1.6
911	Tumor	-1.7
491	Tumor	-1.7
983	Tumor	-1.7
311	Tumor	-1.7
545	Tumor	-1.7
861	Tumor	-1.9
331	Tumor	-1.9
815	Tumor	-1.9
375	Tumor	-1.9
351	Tumor	-2.0
671	Tumor	-2.0
385	Tumor	-2.2
283	Tumor	-2.3
285	Tumor	-2.4
661	Tumor	-2.5
211	Tumor	-2.7
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA027423	Antibody HPA027442	Antibody CAB032906
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS