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TMEM106C
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  • TMEM106C
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Low
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: High
White matter cells - cytoplasm/membrane: Medium
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.0 nTPM
HPA Brain:26.6 nTPM
GTEx:44.0 nTPM
FANTOM5:25.0 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:45.4 nTPM
Allen mouse:0.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047204
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Low
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane High
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core High
White matter cells - cytoplasm/membrane Medium
White matter cells - nucleus Not detected

CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 26.6
1768 Female, age 72, unknown 34.1
2055 Female, age 91, right hemisphere 30.0
2101 Male, age 74, right hemisphere 29.2
1774 Male, age 80, left hemisphere 29.0
2006 Male, age 61, right hemisphere 26.3
2003 Female, age 85, right hemisphere 23.7
1769 Male, age 76, right hemisphere 20.5
1788 Male, age 55, unknown 20.0
Cerebellar nuclei
nTPM: 15.0
2783 Female, age 72, unknown 21.8
1966 Female, age 91, left hemisphere 18.2
2318 Male, age 74, left hemisphere 16.2
1879 Male, age 55, unknown 15.1
2175 Male, age 61, right hemisphere 14.1
1871 Male, age 74, unknown 13.3
2882 Male, age 76, left hemisphere 12.6
2177 Female, age 85, both hemispheres 12.4
2005 Male, age 80, left hemisphere 11.1
Flocculonodular lobe
nTPM: 23.6
2176 Female, age 91, right hemisphere 28.2
1771 Male, age 80, left hemisphere 26.1
1792 Male, age 74, unknown 25.1
1835 Female, age 85, right hemisphere 25.1
1767 Male, age 76, left hemisphere 22.5
2004 Male, age 61, right hemisphere 19.4
1765 Male, age 55, unknown 18.5
Vermis
nTPM: 24.7
1778 Female, age 91, left hemisphere 28.4
1928 Female, age 72, unknown 27.9
1751 Male, age 74, right hemisphere 27.4
2834 Male, age 80, left hemisphere 27.2
1988 Female, age 85, left hemisphere 26.4
1825 Male, age 74, unknown 25.5
1766 Male, age 55, unknown 22.8
1770 Male, age 76, left hemisphere 21.4
2460 Male, age 61, both hemispheres 15.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 42.8
Samples: 215

Max nTPM: 80.5
Min nTPM: 19.9
Std nTPM: 9.2
Median nTPM: 41.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 80.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 77.5
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 74.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 71.3
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 71.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 69.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 63.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 63.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 62.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 61.0
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 59.0
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 58.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 58.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 57.5
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 56.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 56.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 56.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 56.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 56.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 56.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 55.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 55.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 55.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 54.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 54.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 53.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 51.9
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 50.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 50.8
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 50.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 50.0
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 49.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 49.5
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 49.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 49.3
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 49.3
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 49.2
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 49.0
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 48.7
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 48.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 48.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 48.2
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 48.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 48.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 48.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 48.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 47.8
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 47.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 47.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 47.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 47.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 47.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 47.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 47.1
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 46.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 46.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 46.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 46.2
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 46.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 45.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 45.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 45.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 45.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 45.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 45.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 45.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 45.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 44.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 44.8
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 44.5
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 44.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 44.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 44.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 44.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 44.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 44.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 43.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 43.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 43.9
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 43.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 43.7
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 43.6
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 43.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 43.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 43.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 43.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 43.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 43.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 42.9
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 42.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 42.7
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 42.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 42.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 42.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 42.5
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 42.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 42.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 42.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 42.1
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 42.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 42.1
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 42.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 42.1
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 42.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 41.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 41.6
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 41.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 41.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 41.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 41.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 41.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 41.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 41.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 40.9
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 40.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 40.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 40.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 40.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 40.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 40.5
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 40.5
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 40.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 40.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 40.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 39.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 39.7
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 39.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 39.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 39.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 39.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 39.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 39.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 39.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 39.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 39.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 38.9
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 38.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 38.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 38.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 38.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 38.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 38.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 38.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 38.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 38.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 38.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 38.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 38.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 38.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 38.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 38.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 38.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 38.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 38.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 37.8
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 37.8
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 37.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 37.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 37.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 37.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 37.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 37.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 37.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 37.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 37.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 37.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 37.0
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 37.0
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 36.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 36.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 36.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 36.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 36.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 36.0
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 36.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 35.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 35.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 35.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 35.5
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 35.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 35.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 35.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 35.1
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 35.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 34.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 34.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 34.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 34.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 34.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 33.9
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 33.7
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 33.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 33.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 33.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 33.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 33.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 32.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 32.7
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 32.5
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 31.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 30.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 30.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 30.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 30.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 30.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 30.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 30.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 29.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 29.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 28.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 27.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 26.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 23.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 22.4
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 19.9
Show allShow less
Brain - Cerebellum
Average nTPM: 44.0
Samples: 241

Max nTPM: 81.3
Min nTPM: 15.0
Std nTPM: 7.8
Median nTPM: 43.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 81.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 70.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 65.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 64.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 63.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 62.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 62.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 59.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 59.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 58.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 58.8
GTEX-1192X-3226-SM-5987D 50-59 years, male 58.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 57.5
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 57.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 56.8
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 56.7
GTEX-X261-3126-SM-4PQZC 50-59 years, male 56.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 56.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 56.3
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 56.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 56.0
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 55.9
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 55.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 55.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 54.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 53.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 52.6
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 52.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 52.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 52.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 51.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 51.5
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 51.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 51.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 51.1
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 51.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 50.9
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 50.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 50.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 50.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 50.2
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 50.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 50.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 50.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 50.0
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 49.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 49.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 49.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 49.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 49.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 49.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 48.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 48.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 48.5
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 48.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 48.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 48.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 48.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 47.9
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 47.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 47.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 47.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 47.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 47.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 47.5
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 47.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 47.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 47.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 47.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 47.1
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 46.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 46.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 46.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 46.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 46.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 46.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 46.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 46.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 46.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 46.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 46.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 45.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 45.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 45.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 45.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 45.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 45.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 45.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 45.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 45.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 45.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 44.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 44.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 44.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 44.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 44.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 44.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 44.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 44.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 44.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 44.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 44.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 44.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 44.0
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 43.9
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 43.9
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 43.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 43.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 43.8
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 43.8
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 43.8
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 43.7
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 43.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 43.6
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 43.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 43.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 43.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 43.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 43.4
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 43.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 43.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 43.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 43.2
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 43.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 43.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 43.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 43.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 42.9
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 42.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 42.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 42.8
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 42.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 42.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 42.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 42.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 42.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 42.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 42.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 42.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 42.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 42.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 42.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 42.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 42.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 42.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 42.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 42.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 42.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 42.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 41.9
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 41.9
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 41.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 41.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 41.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 41.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 41.7
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 41.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 41.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 41.6
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 41.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 41.4
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 41.3
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 41.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 41.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 41.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 41.0
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 41.0
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 40.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 40.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 40.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 40.6
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 40.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 40.2
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 40.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 40.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 39.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 39.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 39.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 39.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 39.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 39.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 39.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 39.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 39.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 38.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 38.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 38.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 38.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 38.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 38.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 38.4
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 38.3
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 38.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 38.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 38.1
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 38.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 37.8
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 37.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 37.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 37.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 37.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 37.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 37.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 37.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 36.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 36.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 36.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 36.5
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 36.4
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 36.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 36.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 36.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 36.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 36.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 35.5
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 35.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 34.9
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 34.8
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 34.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 34.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 34.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 34.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 34.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 34.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 34.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 33.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 33.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 33.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 33.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 33.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 33.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 32.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 31.7
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 31.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 31.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 30.7
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 30.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 27.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 25.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 24.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 15.0
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 25.0
FF:10083-102B2 22-68 years, mixed 25.2
FF:10166-103B4 76 years, female 24.9

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 25.5
Samples: 4

Max nTPM: 30.6
Min nTPM: 23.2
Sample A Female 30.6
Sample B Female 24.9
Sample C Male 23.3
Sample D Male 23.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.4
Mouse sample Sample description nTPM
Cerebellum
nTPM: 45.4
Samples: 4

Max nTPM: 50.5
Min nTPM: 42.3
Sample A Male 50.5
Sample B Male 42.3
Sample C Female 45.0
Sample D Female 43.8

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.8
68745456 Antisense, RP_050210_02_A04, Mouse strain C57BL/6J (56 days, male) 0.8

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