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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:155.7 nTPM
HPA Brain:92.4 nTPM
GTEx:155.7 nTPM
FANTOM5:510.0 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:454.7 nTPM
Allen mouse:10.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB015336Antibody CAB069404
Glial cells LowNot detected
Neuronal cells MediumNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.9
2846 Female, age 79, unknown 111.4
2481 Female, age 94, left hemisphere 99.4
1781 Male, age 74, unknown 87.3
2290 Female, age 72, unknown 74.0
1857 Female, age 85, left hemisphere 73.1
1854 Male, age 80, left hemisphere 70.6
2288 Male, age 75, left hemisphere 53.5
2289 Male, age 61, right hemisphere 46.1
Globus pallidus, externus
nTPM: 41.6
2395 Male, age 75, both hemispheres 66.9
1996 Male, age 80, right hemisphere 54.6
2772 Female, age 79, unknown 43.3
2646 Male, age 61, right hemisphere 26.3
2567 Female, age 72, unknown 16.6
Globus pallidus, internus
nTPM: 41.6
2483 Female, age 94, right hemisphere 69.0
2287 Male, age 75, right hemisphere 54.5
2037 Male, age 80, right hemisphere 45.4
2778 Female, age 91, both hemispheres 43.5
1818 Male, age 74, unknown 33.2
2566 Female, age 72, unknown 25.2
2111 Female, age 85, right hemisphere 20.6
Nucleus accumbens
nTPM: 64.3
1856 Female, age 91, right hemisphere 88.4
2391 Female, age 94, left hemisphere 73.2
1783 Male, age 74, unknown 70.0
2698 Female, age 72, unknown 68.2
1806 Female, age 85, left hemisphere 66.8
2286 Male, age 75, left hemisphere 53.7
2824 Male, age 61, right hemisphere 53.1
2732 Male, age 80, right hemisphere 40.9
Nucleus basalis of Meynert
nTPM: 61.9
2821 Male, age 75, both hemispheres 78.1
2393 Male, age 80, right hemisphere 71.9
2484 Female, age 94, left hemisphere 69.8
2569 Male, age 61, both hemispheres 27.9
Nucleus of the diagonal band
nTPM: 92.4
1812 Female, age 91, both hemispheres 116.7
2195 Female, age 85, both hemispheres 114.7
2775 Male, age 80, right hemisphere 103.0
2029 Male, age 61, right hemisphere 76.6
1979 Male, age 74, unknown 51.0
Putamen
nTPM: 75.1
2482 Female, age 94, left hemisphere 124.3
2466 Female, age 79, unknown 114.2
1829 Male, age 74, unknown 73.1
1937 Female, age 91, right hemisphere 68.8
1838 Male, age 80, right hemisphere 66.2
2489 Female, age 72, unknown 43.9
2647 Male, age 75, left hemisphere 35.0
Septal nuclei
nTPM: 89.3
1960 Male, age 74, unknown 128.4
2031 Female, age 72, unknown 124.8
2629 Female, age 94, right hemisphere 101.3
2009 Female, age 91, both hemispheres 91.2
2059 Female, age 85, both hemispheres 82.5
2199 Male, age 80, right hemisphere 49.8
2394 Male, age 61, left hemisphere 47.2
Stria terminalis, bed nucleus
nTPM: 85.0
1974 Female, age 91, both hemispheres 113.4
2486 Female, age 94, both hemispheres 83.1
2201 Male, age 74, unknown 58.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 155.7
Samples: 246

Max nTPM: 367.4
Min nTPM: 43.8
Std nTPM: 62.4
Median nTPM: 150.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 367.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 312.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 299.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 298.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 288.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 286.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 282.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 281.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 274.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 274.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 273.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 272.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 272.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 270.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 266.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 263.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 261.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 254.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 253.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 249.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 249.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 248.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 245.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 245.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 244.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 242.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 241.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 237.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 235.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 233.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 232.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 231.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 230.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 229.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 228.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 227.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 224.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 223.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 220.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 220.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 218.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 217.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 217.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 213.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 213.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 210.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 207.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 207.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 207.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 206.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 205.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 204.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 203.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 202.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 202.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 202.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 201.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 201.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 199.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 198.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 196.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 194.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 194.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 193.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 192.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 192.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 192.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 192.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 191.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 191.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 190.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 190.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 190.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 190.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 189.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 189.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 188.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 187.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 186.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 184.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 182.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 182.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 182.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 182.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 179.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 178.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 177.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 177.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 177.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 176.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 175.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 174.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 173.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 172.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 171.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 171.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 171.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 171.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 170.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 170.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 169.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 169.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 168.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 167.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 167.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 165.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 163.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 162.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 160.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 159.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 158.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 155.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 154.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 153.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 153.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 152.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 152.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 152.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 151.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 150.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 150.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 149.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 147.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 147.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 145.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 145.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 144.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 144.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 144.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 144.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 143.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 143.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 142.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 142.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 140.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 138.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 136.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 136.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 135.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 135.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 134.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 133.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 133.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 132.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 132.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 132.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 132.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 132.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 131.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 130.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 129.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 127.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 125.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 124.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 123.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 123.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 122.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 120.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 120.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 119.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 119.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 115.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 114.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 111.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 111.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 110.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 109.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 109.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 106.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 105.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 103.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 103.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 103.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 101.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 100.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 100.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 99.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 98.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 95.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 93.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 93.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 91.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 90.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 90.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 88.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 87.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 85.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 85.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 83.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 82.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 81.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 80.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 79.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 79.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 77.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 76.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 76.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 75.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 74.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 73.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 70.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 69.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 69.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 63.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 57.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 56.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 54.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 54.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 51.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 43.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 141.0
Samples: 246

Max nTPM: 366.2
Min nTPM: 42.5
Std nTPM: 48.8
Median nTPM: 139.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 366.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 334.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 320.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 311.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 263.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 258.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 257.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 251.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 249.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 244.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 230.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 218.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 215.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 207.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 206.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 205.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 205.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 203.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 202.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 200.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 198.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 196.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 195.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 194.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 192.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 191.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 191.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 191.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 191.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 191.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 189.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 188.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 187.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 186.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 185.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 184.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 183.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 182.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 182.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 179.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 177.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 177.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 176.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 175.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 174.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 173.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 173.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 173.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 172.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 171.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 170.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 170.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 170.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 170.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 168.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 168.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 168.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 167.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 167.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 167.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 166.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 165.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 165.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 164.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 164.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 163.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 163.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 162.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 161.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 161.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 161.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 160.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 160.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 159.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 159.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 158.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 158.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 158.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 157.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 157.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 157.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 156.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 155.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 155.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 155.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 155.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 154.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 154.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 154.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 153.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 153.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 153.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 152.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 152.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 152.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 152.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 152.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 151.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 151.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 151.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 150.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 150.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 150.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 149.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 149.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 149.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 149.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 148.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 147.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 146.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 146.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 146.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 146.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 145.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 144.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 144.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 142.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 142.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 141.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 141.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 141.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 140.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 139.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 138.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 138.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 138.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 137.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 136.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 136.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 136.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 136.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 136.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 135.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 134.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 134.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 133.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 133.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 132.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 131.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 131.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 130.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 130.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 130.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 128.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 128.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 128.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 127.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 127.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 126.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 126.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 126.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 125.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 124.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 124.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 124.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 124.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 123.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 123.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 123.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 123.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 122.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 121.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 121.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 121.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 120.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 120.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 119.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 118.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 116.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 116.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 115.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 115.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 114.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 113.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 113.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 111.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 111.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 110.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 110.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 109.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 109.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 109.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 108.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 107.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 106.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 106.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 104.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 104.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 103.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 103.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 103.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 102.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 101.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 101.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 101.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 101.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 101.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 100.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 99.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 99.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 98.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 98.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 97.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 96.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 96.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 94.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 93.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 93.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 93.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 91.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 91.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 89.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 87.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 86.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 84.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 83.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 82.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 82.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 80.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 79.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 79.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 78.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 78.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 78.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 78.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 78.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 72.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 69.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 67.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 65.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 65.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 64.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 63.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 62.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 59.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 50.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 49.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 49.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.5
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Brain - Putamen (basal ganglia)
Average nTPM: 153.1
Samples: 205

Max nTPM: 366.0
Min nTPM: 43.2
Std nTPM: 59.1
Median nTPM: 141.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 366.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 321.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 318.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 317.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 315.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 292.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 281.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 279.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 272.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 269.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 264.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 254.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 253.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 251.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 251.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 249.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 244.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 243.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 242.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 238.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 238.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 234.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 233.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 229.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 228.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 227.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 225.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 221.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 221.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 215.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 207.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 205.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 205.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 204.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 203.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 203.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 202.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 201.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 199.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 199.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 197.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 197.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 197.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 196.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 196.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 194.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 194.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 194.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 194.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 193.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 193.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 193.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 190.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 189.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 189.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 188.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 187.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 187.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 186.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 183.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 183.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 182.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 178.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 177.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 177.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 177.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 174.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 173.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 172.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 172.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 167.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 167.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 167.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 165.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 164.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 162.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 161.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 160.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 159.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 158.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 157.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 155.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 155.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 155.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 153.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 153.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 153.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 152.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 152.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 152.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 152.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 152.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 151.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 151.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 148.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 148.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 148.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 148.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 146.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 143.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 143.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 142.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 141.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 140.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 139.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 139.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 138.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 138.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 137.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 136.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 136.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 135.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 134.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 132.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 132.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 131.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 130.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 130.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 130.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 129.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 129.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 129.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 128.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 127.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 127.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 127.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 126.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 124.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 124.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 123.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 123.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 122.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 122.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 121.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 120.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 120.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 119.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 118.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 117.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 117.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 117.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 116.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 116.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 116.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 116.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 116.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 115.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 114.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 113.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 111.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 109.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 108.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 107.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 107.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 106.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 106.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 105.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 104.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 103.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 103.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 101.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 100.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 98.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 98.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 98.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 97.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 96.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 96.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 96.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 96.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 96.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 95.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 94.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 93.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 92.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 91.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 91.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 90.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 89.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 87.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 85.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 85.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 85.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 85.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 85.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 84.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 83.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 82.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 81.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 77.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 77.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 77.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 76.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 75.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 74.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 73.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 70.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 66.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 65.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 65.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 43.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

510.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 510.0
FF:10164-103B2 76 years, female 510.0
Nucleus accumbens
Scaled Tags Per Million: 502.6
FF:10037-101F1 23-56 years, mixed 502.6
Putamen
Scaled Tags Per Million: 435.0
FF:10176-103C5 60 years, female 435.0
Globus pallidus
Scaled Tags Per Million: 394.9
FF:10161-103A8 76 years, female 440.7
FF:10175-103C4 60 years, female 349.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.1
Pig sample Sample description nTPM
Caudate
nTPM: 13.4
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.9
Sample A Female 10.9
Sample B Female 13.0
Sample C Male 15.2
Sample D Male 14.6
Putamen
nTPM: 17.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 14.6
Sample C Male 24.7
Sample D Male 16.7
Septum
nTPM: 26.1
Samples: 4

Max nTPM: 35.8
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 19.4
Sample C Male 35.6
Sample D Male 35.8
Ventral pallidum
nTPM: 19.7
Samples: 4

Max nTPM: 32.1
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 21.5
Sample C Male 32.1
Sample D Male 14.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

454.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 398.0
Samples: 4

Max nTPM: 432.2
Min nTPM: 367.8
Sample A Male 367.8
Sample B Male 380.1
Sample C Female 411.7
Sample D Female 432.2
Septum
nTPM: 407.4
Samples: 4

Max nTPM: 432.3
Min nTPM: 347.1
Sample A Male 429.3
Sample B Male 420.7
Sample C Female 432.3
Sample D Female 347.1
Ventral forebrain
nTPM: 454.7
Samples: 4

Max nTPM: 508.3
Min nTPM: 412.7
Sample A Male 421.7
Sample B Male 412.7
Sample C Female 508.3
Sample D Female 476.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.1
69736076 Antisense, RP_050503_04_B06, Mouse strain C57BL/6J (56 days, male) 18.2
74736408 Antisense, RP_060306_01_D07, Mouse strain C57BL/6J (56 days, male) 2.0
Pallidum
Expression energy: 7.9
69736076 Antisense, RP_050503_04_B06, Mouse strain C57BL/6J (56 days, male) 14.6
74736408 Antisense, RP_060306_01_D07, Mouse strain C57BL/6J (56 days, male) 1.2

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