We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LRP4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • LRP4
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:17.3 nTPM
HPA Brain:93.2 nTPM
GTEx:17.3 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:12.4 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011934Antibody HPA012300
Glial cells LowHigh
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 89.0
2481 Female, age 94, left hemisphere 126.2
2288 Male, age 75, left hemisphere 115.5
2289 Male, age 61, right hemisphere 94.0
1857 Female, age 85, left hemisphere 89.1
2290 Female, age 72, unknown 84.2
1854 Male, age 80, left hemisphere 71.6
2846 Female, age 79, unknown 65.6
1781 Male, age 74, unknown 65.5
Globus pallidus, externus
nTPM: 93.2
2646 Male, age 61, right hemisphere 124.2
1996 Male, age 80, right hemisphere 117.8
2567 Female, age 72, unknown 91.8
2772 Female, age 79, unknown 71.1
2395 Male, age 75, both hemispheres 61.1
Globus pallidus, internus
nTPM: 88.2
2037 Male, age 80, right hemisphere 107.2
2483 Female, age 94, right hemisphere 99.0
1818 Male, age 74, unknown 92.8
2566 Female, age 72, unknown 83.0
2111 Female, age 85, right hemisphere 80.9
2778 Female, age 91, both hemispheres 79.4
2287 Male, age 75, right hemisphere 75.1
Nucleus accumbens
nTPM: 76.7
2286 Male, age 75, left hemisphere 111.7
2391 Female, age 94, left hemisphere 94.6
1806 Female, age 85, left hemisphere 81.1
2732 Male, age 80, right hemisphere 74.9
1783 Male, age 74, unknown 73.7
2824 Male, age 61, right hemisphere 71.8
2698 Female, age 72, unknown 55.6
1856 Female, age 91, right hemisphere 50.2
Nucleus basalis of Meynert
nTPM: 79.7
2569 Male, age 61, both hemispheres 127.9
2484 Female, age 94, left hemisphere 72.1
2393 Male, age 80, right hemisphere 62.3
2821 Male, age 75, both hemispheres 56.4
Nucleus of the diagonal band
nTPM: 53.5
1979 Male, age 74, unknown 78.1
2195 Female, age 85, both hemispheres 59.8
1812 Female, age 91, both hemispheres 47.2
2775 Male, age 80, right hemisphere 42.0
2029 Male, age 61, right hemisphere 40.1
Putamen
nTPM: 82.3
2482 Female, age 94, left hemisphere 107.2
2647 Male, age 75, left hemisphere 101.4
2489 Female, age 72, unknown 93.1
1829 Male, age 74, unknown 80.3
2466 Female, age 79, unknown 72.5
1937 Female, age 91, right hemisphere 67.6
1838 Male, age 80, right hemisphere 53.9
Septal nuclei
nTPM: 68.0
2059 Female, age 85, both hemispheres 96.8
2394 Male, age 61, left hemisphere 84.5
2199 Male, age 80, right hemisphere 80.8
1960 Male, age 74, unknown 65.2
2009 Female, age 91, both hemispheres 54.3
2031 Female, age 72, unknown 48.6
2629 Female, age 94, right hemisphere 45.7
Stria terminalis, bed nucleus
nTPM: 53.6
2201 Male, age 74, unknown 62.0
1974 Female, age 91, both hemispheres 49.5
2486 Female, age 94, both hemispheres 49.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.3
Samples: 246

Max nTPM: 50.4
Min nTPM: 2.1
Std nTPM: 8.5
Median nTPM: 15.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 42.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 38.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 36.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 36.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 36.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 33.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 32.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 31.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 31.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 31.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 31.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 30.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 29.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 29.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 29.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 28.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 28.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 28.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 27.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 27.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 27.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 27.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 27.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 27.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 26.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 26.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 26.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 26.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 26.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 25.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 25.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 25.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 25.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 25.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 25.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 24.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 24.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 24.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 24.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 24.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 23.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 23.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 23.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 23.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 22.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 22.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 22.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 22.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 22.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 22.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 22.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 21.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 21.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 21.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 21.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 20.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 20.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 20.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 20.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 20.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 20.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 20.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 20.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 20.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 20.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 20.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 19.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 19.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 19.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 19.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 19.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 19.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 19.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 19.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 18.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 18.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 18.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 18.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 18.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 18.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 18.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 18.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 18.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 18.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 18.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 17.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 17.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 17.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 17.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 17.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 17.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 17.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 17.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 17.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 17.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 16.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 16.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 16.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 16.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 16.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 15.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 15.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 15.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 15.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 15.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 15.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 15.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 15.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 14.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 14.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 14.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 14.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 14.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 14.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 14.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 14.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 14.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 14.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 14.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 14.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 13.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 13.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 13.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 13.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 13.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 13.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 13.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 13.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 13.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 13.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 13.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 12.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 12.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 12.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 12.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 12.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 12.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 12.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 12.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 12.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 12.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 12.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 12.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 11.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 11.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 11.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 11.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 11.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 11.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 11.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 11.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 11.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 11.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 11.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 11.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 11.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 10.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 10.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 10.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 10.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 9.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 9.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 9.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 9.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 9.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 8.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 8.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 8.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 7.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 7.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 7.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 7.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 7.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 6.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 6.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 6.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 6.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 6.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 6.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 5.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 5.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 5.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 5.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 4.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 4.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 3.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 3.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 10.6
Samples: 246

Max nTPM: 39.8
Min nTPM: 1.8
Std nTPM: 5.9
Median nTPM: 9.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 39.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 33.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 29.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 28.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 27.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 23.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 23.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 22.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 21.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 20.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 20.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 20.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 19.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 18.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 18.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 18.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 18.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 18.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 18.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 18.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 18.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 18.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 18.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 17.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 17.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 17.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 17.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 17.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 17.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 16.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 16.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 16.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 16.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 16.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 16.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 16.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 15.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 15.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 15.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 15.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 15.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 15.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 14.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 14.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 14.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 14.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 14.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 14.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 14.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 14.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 14.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 14.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 14.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 14.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 14.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 13.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 13.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 13.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 13.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 13.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 13.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 13.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 13.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 13.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 13.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 13.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 13.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 12.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 12.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 12.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 12.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 12.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 12.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 12.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 12.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 12.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 12.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 12.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 11.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 11.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 11.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 11.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 11.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 11.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 11.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 11.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 11.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 10.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 10.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 10.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 10.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 10.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 10.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 10.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 10.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 10.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 10.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 10.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 10.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 10.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 10.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 10.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 10.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 9.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 9.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 9.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 9.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 9.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 9.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 9.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 9.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 9.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 9.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 9.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 9.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 9.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 8.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 8.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 8.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 8.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 8.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 8.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 8.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 8.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 8.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 8.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 8.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 8.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 8.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 8.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 7.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 7.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 7.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 7.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 7.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 7.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 7.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 7.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 7.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 7.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 7.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 7.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 6.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 6.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 6.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 6.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 6.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 6.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 6.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 6.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 6.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 6.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 5.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 5.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 5.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 5.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 5.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 5.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 5.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 5.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 5.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 5.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 5.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 5.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 5.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 5.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 5.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 4.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 4.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 4.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 4.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 4.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 4.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 4.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 4.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 4.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 4.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 4.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 4.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 4.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 4.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 4.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 4.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 3.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 3.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 3.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 3.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 3.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 3.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 3.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 3.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 3.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 3.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 3.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 3.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 2.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 2.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 14.3
Samples: 205

Max nTPM: 31.5
Min nTPM: 2.0
Std nTPM: 6.8
Median nTPM: 13.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 31.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 30.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 30.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 30.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 29.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 29.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 29.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 28.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 28.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 27.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 27.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 26.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 26.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 26.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 25.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 24.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 23.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 23.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 23.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 23.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 23.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 23.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 23.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 22.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 22.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 22.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 22.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 21.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 21.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 21.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 20.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 20.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 20.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 20.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 20.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 20.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 19.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 19.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 19.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 19.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 19.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 19.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 18.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 18.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 18.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 18.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 17.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 17.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 17.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 17.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 17.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 16.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 16.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 16.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 16.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 16.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 16.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 16.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 16.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 16.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 15.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 15.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 15.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 15.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 15.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 15.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 14.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 14.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 14.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 14.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 14.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 14.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 13.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 13.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 13.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 13.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 13.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 12.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 12.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 12.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 11.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 11.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 11.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 11.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 11.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 11.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 11.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 11.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 10.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 10.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 10.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 9.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 8.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 8.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 8.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 8.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 8.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 8.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 7.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 7.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 7.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 7.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 7.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 6.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 6.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 6.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 6.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 6.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 6.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 5.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 5.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 4.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 4.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 4.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 3.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 2.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 51.1
FF:10164-103B2 76 years, female 51.1
Nucleus accumbens
Scaled Tags Per Million: 35.7
FF:10037-101F1 23-56 years, mixed 35.7
Putamen
Scaled Tags Per Million: 45.7
FF:10176-103C5 60 years, female 45.7
Globus pallidus
Scaled Tags Per Million: 47.1
FF:10161-103A8 76 years, female 48.0
FF:10175-103C4 60 years, female 46.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.0
Pig sample Sample description nTPM
Caudate
nTPM: 15.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 11.1
Sample A Female 11.1
Sample B Female 16.1
Sample C Male 19.7
Sample D Male 15.4
Putamen
nTPM: 12.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.4
Sample A Female 11.4
Sample B Female 12.4
Sample C Male 13.9
Sample D Male 12.7
Septum
nTPM: 20.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 14.5
Sample A Female 14.5
Sample B Female 19.6
Sample C Male 19.0
Sample D Male 27.0
Ventral pallidum
nTPM: 14.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 13.8
Sample C Male 15.9
Sample D Male 13.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 10.2
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.3
Sample A Male 8.3
Sample B Male 9.7
Sample C Female 11.0
Sample D Female 11.8
Septum
nTPM: 12.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 9.0
Sample A Male 9.0
Sample B Male 15.6
Sample C Female 13.6
Sample D Female 11.5
Ventral forebrain
nTPM: 10.1
Samples: 4

Max nTPM: 11.7
Min nTPM: 8.9
Sample A Male 9.2
Sample B Male 8.9
Sample C Female 11.7
Sample D Female 10.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
69736256 Antisense, RP_050503_04_D08, Mouse strain C57BL/6J (56 days, male) 0.1
71670487 Antisense, RP_050503_04_D08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.0
69736256 Antisense, RP_050503_04_D08, Mouse strain C57BL/6J (56 days, male) 0.0
71670487 Antisense, RP_050503_04_D08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org