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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:11.2 nTPM
HPA Brain:25.5 nTPM
GTEx:11.2 nTPM
FANTOM5:112.7 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:74.3 nTPM
Allen mouse:1.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002996Antibody CAB020835
Glial cells LowNot detected
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.0
2481 Female, age 94, left hemisphere 30.1
1854 Male, age 80, left hemisphere 24.5
2288 Male, age 75, left hemisphere 23.1
1857 Female, age 85, left hemisphere 22.4
2290 Female, age 72, unknown 22.4
2846 Female, age 79, unknown 21.9
1781 Male, age 74, unknown 20.1
2289 Male, age 61, right hemisphere 19.8
Globus pallidus, externus
nTPM: 25.0
2395 Male, age 75, both hemispheres 27.5
2772 Female, age 79, unknown 25.8
1996 Male, age 80, right hemisphere 25.2
2646 Male, age 61, right hemisphere 23.8
2567 Female, age 72, unknown 22.6
Globus pallidus, internus
nTPM: 25.5
2483 Female, age 94, right hemisphere 32.2
2778 Female, age 91, both hemispheres 28.2
2287 Male, age 75, right hemisphere 27.7
2111 Female, age 85, right hemisphere 24.0
2037 Male, age 80, right hemisphere 22.5
2566 Female, age 72, unknown 22.2
1818 Male, age 74, unknown 21.4
Nucleus accumbens
nTPM: 25.4
2391 Female, age 94, left hemisphere 28.2
1806 Female, age 85, left hemisphere 27.8
1856 Female, age 91, right hemisphere 26.3
2824 Male, age 61, right hemisphere 26.1
2286 Male, age 75, left hemisphere 25.9
1783 Male, age 74, unknown 23.9
2732 Male, age 80, right hemisphere 23.7
2698 Female, age 72, unknown 21.5
Nucleus basalis of Meynert
nTPM: 22.7
2569 Male, age 61, both hemispheres 23.8
2484 Female, age 94, left hemisphere 23.4
2393 Male, age 80, right hemisphere 22.9
2821 Male, age 75, both hemispheres 20.7
Nucleus of the diagonal band
nTPM: 22.2
1979 Male, age 74, unknown 24.9
2775 Male, age 80, right hemisphere 23.6
1812 Female, age 91, both hemispheres 23.1
2195 Female, age 85, both hemispheres 20.4
2029 Male, age 61, right hemisphere 18.9
Putamen
nTPM: 22.8
2466 Female, age 79, unknown 26.1
2482 Female, age 94, left hemisphere 25.0
1838 Male, age 80, right hemisphere 24.0
1937 Female, age 91, right hemisphere 23.7
1829 Male, age 74, unknown 22.6
2647 Male, age 75, left hemisphere 20.9
2489 Female, age 72, unknown 17.6
Septal nuclei
nTPM: 21.2
2031 Female, age 72, unknown 24.0
1960 Male, age 74, unknown 23.2
2394 Male, age 61, left hemisphere 21.5
2199 Male, age 80, right hemisphere 21.4
2009 Female, age 91, both hemispheres 21.3
2059 Female, age 85, both hemispheres 21.1
2629 Female, age 94, right hemisphere 15.7
Stria terminalis, bed nucleus
nTPM: 21.7
1974 Female, age 91, both hemispheres 24.6
2201 Male, age 74, unknown 21.4
2486 Female, age 94, both hemispheres 19.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.2
Samples: 246

Max nTPM: 16.1
Min nTPM: 6.6
Std nTPM: 1.4
Median nTPM: 10.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 16.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 14.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 13.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 13.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 13.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 13.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 13.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 12.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 12.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 12.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 12.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 12.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 12.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 12.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 12.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 12.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 12.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 12.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 11.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 11.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 11.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 11.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 11.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 11.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 11.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 11.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 11.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 11.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 11.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 11.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 11.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 11.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 11.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 11.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 11.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 11.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 11.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 11.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 11.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 11.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 11.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 11.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 11.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 11.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 11.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 11.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 11.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 11.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 11.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 11.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 11.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 11.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 11.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 11.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 10.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 10.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 10.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 10.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 10.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 10.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 10.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 10.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 10.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 10.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 10.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 10.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 10.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 10.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 10.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 10.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 10.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 10.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 10.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 10.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 10.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 10.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 10.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 10.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 10.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 10.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 10.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 10.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 10.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 10.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 10.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 10.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 10.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 10.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 10.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 10.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 10.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 10.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 10.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 10.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 10.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 10.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 10.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 10.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 10.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 10.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 10.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 10.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 10.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 9.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 9.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 9.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 9.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 9.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 9.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 9.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 9.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 9.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 9.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 9.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 9.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 9.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 9.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 9.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 9.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 9.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 9.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 9.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 9.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 9.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 9.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 9.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 9.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 9.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 9.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 9.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 9.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 9.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 9.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 9.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 9.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 9.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 9.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 9.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 9.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 9.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 9.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 9.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 9.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 9.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 9.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 9.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 9.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 9.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 9.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 9.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 9.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 9.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 9.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 9.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 9.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 9.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 9.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 9.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 9.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 9.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 9.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 9.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 9.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 8.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 8.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 8.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 8.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 8.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 8.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 8.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 8.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 8.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 8.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 8.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 8.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 8.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 8.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 8.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 8.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 8.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 7.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 7.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 7.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 7.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 7.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 7.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 7.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.2
Samples: 246

Max nTPM: 17.1
Min nTPM: 6.7
Std nTPM: 1.8
Median nTPM: 11.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 17.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 16.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 16.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 16.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 15.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 15.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 15.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 15.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 14.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 14.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 14.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 14.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 14.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 14.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 14.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 14.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 13.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 13.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 13.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 13.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 13.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 13.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 13.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 13.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 13.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 13.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 13.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 13.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 13.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 13.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 13.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 13.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 13.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 13.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 13.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 13.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 13.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 13.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 13.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 12.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 12.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 12.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 12.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 12.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 12.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 12.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 12.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 12.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 12.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 12.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 12.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 12.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 12.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 12.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 12.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 12.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 12.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 12.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 12.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 12.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 12.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 12.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 12.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 12.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 12.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 12.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 12.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 12.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 11.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 11.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 11.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 11.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 11.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 11.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 11.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 11.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 11.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 11.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 11.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 11.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 11.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 11.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 11.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 11.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 11.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 11.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 11.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 11.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 11.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 11.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 11.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 11.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 11.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 11.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 11.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 11.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 11.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 11.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 11.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 11.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 11.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 11.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 11.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 11.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 11.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 11.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 11.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 11.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 11.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 11.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 11.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 11.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 11.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 11.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 10.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 10.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 10.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 10.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 10.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 10.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 10.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 10.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 10.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 10.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 10.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 10.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 10.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 10.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 10.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 10.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 10.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 10.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 10.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 10.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 10.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 10.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 10.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 10.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 10.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 10.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 10.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 10.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 10.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 10.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 10.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 10.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 10.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 10.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 10.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 10.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 10.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 10.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 10.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 10.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 9.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 9.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 9.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 9.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 9.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 9.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 9.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 9.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 9.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 9.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 9.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 9.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 9.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 9.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 9.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 9.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 9.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 9.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 9.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 9.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 9.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 9.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 9.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 9.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 9.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 9.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 8.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 8.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 8.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 8.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 8.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 8.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 8.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 8.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 8.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 8.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 7.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 7.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 7.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 7.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 6.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.7
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Brain - Putamen (basal ganglia)
Average nTPM: 9.6
Samples: 205

Max nTPM: 16.4
Min nTPM: 5.5
Std nTPM: 1.3
Median nTPM: 9.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 13.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 13.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 12.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 11.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 11.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 11.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 11.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 11.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 11.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 11.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 11.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 11.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 11.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 11.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 11.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 11.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 11.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 10.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 10.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 10.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 10.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 10.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 10.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 10.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 10.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 10.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 10.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 10.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 10.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 10.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 10.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 10.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 10.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 10.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 10.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 10.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 10.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 10.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 10.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 9.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 9.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 9.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 9.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 9.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 9.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 9.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 9.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 9.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 9.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 9.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 9.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 9.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 9.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 9.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 9.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 9.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 9.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 9.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 9.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 9.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 9.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 9.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 9.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 9.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 9.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 9.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 9.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 9.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 9.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 9.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 9.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 9.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 9.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 9.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 8.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 8.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 8.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 8.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 8.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 8.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 8.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 8.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 8.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 8.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 8.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 8.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 8.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 8.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 7.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 7.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 7.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 7.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 7.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 7.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 6.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

112.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.2
FF:10164-103B2 76 years, female 74.2
Nucleus accumbens
Scaled Tags Per Million: 92.2
FF:10037-101F1 23-56 years, mixed 92.2
Putamen
Scaled Tags Per Million: 76.3
FF:10176-103C5 60 years, female 76.3
Globus pallidus
Scaled Tags Per Million: 112.7
FF:10175-103C4 60 years, female 127.9
FF:10161-103A8 76 years, female 97.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.4
Pig sample Sample description nTPM
Caudate
nTPM: 13.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 12.1
Sample A Female 13.9
Sample B Female 13.1
Sample C Male 12.1
Sample D Male 14.0
Putamen
nTPM: 14.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.0
Sample A Female 13.9
Sample B Female 13.1
Sample C Male 18.2
Sample D Male 13.0
Septum
nTPM: 17.5
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.9
Sample A Female 17.0
Sample B Female 17.5
Sample C Male 19.4
Sample D Male 15.9
Ventral pallidum
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.9
Sample A Female 16.3
Sample B Female 16.4
Sample C Male 18.0
Sample D Male 13.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 52.1
Samples: 4

Max nTPM: 56.1
Min nTPM: 49.9
Sample A Male 51.2
Sample B Male 49.9
Sample C Female 51.2
Sample D Female 56.1
Septum
nTPM: 74.3
Samples: 4

Max nTPM: 77.0
Min nTPM: 70.5
Sample A Male 77.0
Sample B Male 74.9
Sample C Female 74.6
Sample D Female 70.5
Ventral forebrain
nTPM: 63.7
Samples: 4

Max nTPM: 68.1
Min nTPM: 58.9
Sample A Male 58.9
Sample B Male 68.1
Sample C Female 65.7
Sample D Female 61.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
393196 Antisense, RP_040804_02_C04, Mouse strain C57BL/6J (56 days, male) 2.1
70919531 Antisense, RP_050713_01_E07, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 1.6
393196 Antisense, RP_040804_02_C04, Mouse strain C57BL/6J (56 days, male) 3.1
70919531 Antisense, RP_050713_01_E07, Mouse strain C57BL/6J (56 days, male) 0.2

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