PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:785.8 nTPM
FANTOM5:859.6 Scaled Tags Per Million
Pig:68.1 nTPM
Mouse:81.3 nTPM
Allen mouse:1.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 785.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 322.5
1984 Male, age 76, both hemispheres 369.7
2301 Female, age 85, both hemispheres 368.6
2090 Male, age 80, both hemispheres 316.3
2188 Female, age 91, both hemispheres 235.6
Area postrema
nTPM: 785.8
2799 Male, age 61, both hemispheres 1353.7
2054 Male, age 76, both hemispheres 539.2
2306 Male, age 80, both hemispheres 464.4
Dorsal cochlear nucleus
nTPM: 379.3
2058 Male, age 76, both hemispheres 477.5
2802 Male, age 74, right hemisphere 421.7
2378 Male, age 80, both hemispheres 350.2
2370 Male, age 61, both hemispheres 332.7
2187 Female, age 91, both hemispheres 314.2
Dorsal medullary reticular nucleus
nTPM: 288.0
2040 Female, age 85, both hemispheres 292.2
2373 Male, age 61, both hemispheres 289.0
2088 Male, age 76, both hemispheres 282.8
Dorsal motor vagal complex
nTPM: 390.5
2797 Male, age 61, both hemispheres 517.4
2643 Male, age 74, both hemispheres 467.3
2813 Female, age 72, unknown 398.6
2185 Male, age 76, both hemispheres 389.5
2000 Male, age 74, unknown 369.7
2807 Female, age 85, both hemispheres 350.2
2844 Male, age 55, unknown 330.7
2133 Female, age 91, both hemispheres 300.3
Dorsal tegmental nucleus
nTPM: 412.6
2358 Male, age 61, both hemispheres 509.1
1936 Male, age 76, left hemisphere 438.2
2326 Male, age 74, both hemispheres 363.2
2083 Male, age 80, both hemispheres 339.8
Dorsolateral tegmental area
nTPM: 316.5
2360 Male, age 74, both hemispheres 380.4
2654 Male, age 80, both hemispheres 335.5
2337 Male, age 61, both hemispheres 318.5
2141 Male, age 76, both hemispheres 314.4
2751 Female, age 85, both hemispheres 233.6
Gigantocellular reticular nuclei, medullary
nTPM: 261.9
2314 Male, age 61, both hemispheres 380.1
2462 Male, age 74, both hemispheres 265.0
1876 Female, age 85, both hemispheres 259.3
2387 Female, age 91, both hemispheres 238.5
2022 Male, age 76, right hemisphere 235.9
2310 Male, age 80, both hemispheres 192.3
Gigantocellular reticular nuclei, pars
nTPM: 251.0
2084 Female, age 85, both hemispheres 270.9
2336 Male, age 61, both hemispheres 256.5
2706 Male, age 80, both hemispheres 256.3
2330 Male, age 80, both hemispheres 253.1
2168 Male, age 76, both hemispheres 218.4
Inferior olive
nTPM: 514.8
2085 Female, age 85, both hemispheres 554.1
2563 Male, age 74, both hemispheres 553.4
2178 Male, age 61, both hemispheres 505.8
2379 Male, age 80, both hemispheres 489.6
2628 Female, age 91, both hemispheres 471.3
Kolliker-Fuse nucleus
nTPM: 463.6
2315 Male, age 76, right hemisphere 920.4
2163 Male, age 80, both hemispheres 285.7
2793 Female, age 91, left hemisphere 184.6
Lateral lemniscal nuclei
nTPM: 184.6
2746 Female, age 85, left hemisphere 239.5
2169 Male, age 76, both hemispheres 219.7
2453 Male, age 74, right hemisphere 170.4
2036 Male, age 80, both hemispheres 163.9
2320 Female, age 91, left hemisphere 129.3
Lateral medullary reticular nucleus
nTPM: 426.4
2804 Female, age 91, both hemispheres 510.4
2374 Male, age 61, both hemispheres 460.8
2305 Male, age 74, both hemispheres 412.1
2190 Female, age 85, both hemispheres 408.8
2044 Male, age 76, both hemispheres 397.4
2852 Male, age 80, both hemispheres 368.7
Lateral parabrachial nucleus
nTPM: 411.7
2792 Male, age 76, both hemispheres 612.3
2139 Female, age 85, right hemisphere 381.2
2013 Male, age 80, both hemispheres 336.0
2790 Male, age 61, both hemispheres 317.1
Lateral vestibular nucleus
nTPM: 307.7
2311 Male, age 80, both hemispheres 333.2
2184 Male, age 76, both hemispheres 282.2
Locus coeruleus
nTPM: 305.4
2788 Male, age 74, unknown 341.5
1980 Male, age 76, both hemispheres 340.3
2123 Female, age 91, both hemispheres 334.5
2317 Female, age 72, unknown 314.3
2014 Male, age 55, unknown 272.2
2720 Male, age 74, both hemispheres 269.8
2162 Male, age 80, both hemispheres 265.1
Medial olivary nucleus
nTPM: 597.6
2138 Female, age 91, both hemispheres 728.5
1943 Male, age 61, both hemispheres 637.6
1962 Male, age 76, both hemispheres 573.3
2851 Male, age 80, both hemispheres 450.9
Medial parabrachial nucleus
nTPM: 296.6
2156 Male, age 61, both hemispheres 407.8
2786 Male, age 76, both hemispheres 302.7
2170 Female, age 91, both hemispheres 269.5
2854 Male, age 80, both hemispheres 269.2
2463 Female, age 85, right hemisphere 233.7
Medial periolivary nuclei
nTPM: 230.8
2791 Male, age 74, right hemisphere 289.2
2063 Male, age 76, both hemispheres 270.4
2081 Male, age 80, both hemispheres 228.9
2171 Female, age 85, both hemispheres 191.1
2458 Female, age 91, both hemispheres 174.5
Medial vestibular nucleus
nTPM: 343.3
2134 Male, age 76, both hemispheres 471.4
2743 Female, age 85, both hemispheres 401.0
2624 Male, age 61, both hemispheres 392.0
2801 Male, age 74, both hemispheres 349.2
2093 Male, age 80, both hemispheres 235.6
2803 Female, age 91, both hemispheres 210.5
Motor facial nucleus
nTPM: 241.8
2126 Male, age 61, both hemispheres 289.2
2795 Female, age 91, both hemispheres 272.9
2062 Male, age 76, both hemispheres 256.3
2365 Male, age 74, right hemisphere 241.5
2697 Female, age 85, both hemispheres 231.0
2327 Male, age 80, both hemispheres 159.6
Motor hypoglossal nucleus
nTPM: 322.4
2277 Male, age 76, both hemispheres 455.4
2461 Male, age 61, both hemispheres 380.0
2125 Female, age 91, both hemispheres 265.6
2182 Male, age 80, both hemispheres 265.3
2132 Female, age 85, both hemispheres 245.6
Motor trigeminal nucleus
nTPM: 226.1
2309 Male, age 76, both hemispheres 304.9
2335 Male, age 61, both hemispheres 263.3
2560 Male, age 74, both hemispheres 203.2
2321 Female, age 91, both hemispheres 186.9
2079 Male, age 80, both hemispheres 172.1
Nuclei of the trapezoid body
nTPM: 228.3
1983 Male, age 76, both hemispheres 310.8
2166 Male, age 80, both hemispheres 224.8
2368 Female, age 91, both hemispheres 222.0
2735 Female, age 85, both hemispheres 210.8
2159 Male, age 61, both hemispheres 173.2
Nucleus ambiguus
nTPM: 395.3
2071 Male, age 76, both hemispheres 616.6
2096 Female, age 85, both hemispheres 174.0
Nucleus cuneatus
nTPM: 331.0
2808 Female, age 85, both hemispheres 424.2
2564 Male, age 74, both hemispheres 404.9
2380 Male, age 80, both hemispheres 388.4
2376 Male, age 61, both hemispheres 357.2
2562 Male, age 61, both hemispheres 351.8
2100 Male, age 76, both hemispheres 296.5
2805 Female, age 91, both hemispheres 267.0
2131 Male, age 76, both hemispheres 255.7
2381 Male, age 80, both hemispheres 233.7
Nucleus gracilis
nTPM: 369.8
2627 Male, age 74, both hemispheres 473.3
2299 Female, age 85, both hemispheres 344.8
2382 Male, age 80, both hemispheres 291.3
Nucleus raphe magnus
nTPM: 203.7
2051 Male, age 76, both hemispheres 312.8
2455 Male, age 74, both hemispheres 227.6
2328 Male, age 80, both hemispheres 214.0
2172 Female, age 85, both hemispheres 167.0
2160 Male, age 61, both hemispheres 155.8
2459 Female, age 91, both hemispheres 145.0
Nucleus raphe obscurus
nTPM: 474.3
2142 Male, age 76, midline 673.2
2845 Female, age 85, midline 392.8
2800 Male, age 61, midline 356.8
Nucleus raphe pallidus
nTPM: 577.7
1924 Male, age 61, midline 806.4
2145 Male, age 76, midline 554.4
2183 Male, age 80, midline 372.3
Nucleus tractus solitarii
nTPM: 413.3
2144 Female, age 91, right hemisphere 594.8
2191 Female, age 85, both hemispheres 408.9
2656 Male, age 76, both hemispheres 332.2
2307 Male, age 80, both hemispheres 317.5
Paramedian reticular nucleus
nTPM: 317.8
2052 Male, age 76, both hemispheres 466.2
2057 Male, age 80, both hemispheres 294.7
2313 Male, age 61, both hemispheres 264.9
2050 Female, age 85, both hemispheres 245.3
Parvicellular reticular nuclei
nTPM: 280.4
2095 Male, age 76, both hemispheres 355.7
2119 Male, age 80, both hemispheres 326.9
2558 Male, age 74, both hemispheres 158.7
Parvicellular reticular nuclei, medullary
nTPM: 280.2
2091 Female, age 85, both hemispheres 289.1
2181 Male, age 80, left hemisphere 276.5
2189 Female, age 91, both hemispheres 275.0
Pedunculopontine tegmental nucleus
nTPM: 318.0
2334 Male, age 80, both hemispheres 356.8
2338 Male, age 61, both hemispheres 324.2
1921 Female, age 85, both hemispheres 273.0
Peritrigeminal nucleus
nTPM: 472.8
2136 Male, age 76, both hemispheres 506.6
2067 Female, age 85, both hemispheres 496.3
2179 Male, age 61, both hemispheres 415.5
Pontine nuclei
nTPM: 199.3
2109 Female, age 72, unknown 269.3
1863 Male, age 55, unknown 249.0
2115 Male, age 80, left hemisphere 230.3
1968 Male, age 76, left hemisphere 215.3
2787 Female, age 85, both hemispheres 188.2
2319 Female, age 91, both hemispheres 162.7
2454 Male, age 74, left hemisphere 145.9
2727 Male, age 61, right hemisphere 133.8
Pontine raphe nucleus
nTPM: 241.4
2853 Male, age 76, midline 272.2
2122 Female, age 85, midline 210.5
Posteroventral cochlear nucleus
nTPM: 284.0
2070 Male, age 76, both hemispheres 339.9
2371 Male, age 61, both hemispheres 309.6
2341 Male, age 80, both hemispheres 294.7
2752 Female, age 85, both hemispheres 242.5
2135 Female, age 91, both hemispheres 233.2
Prepositus hypoglossal nucleus
nTPM: 391.3
2086 Male, age 80, both hemispheres 423.6
2855 Female, age 85, right hemisphere 359.0
Principal sensory trigeminal nucleus
nTPM: 214.9
2324 Male, age 76, both hemispheres 368.2
2158 Male, age 61, both hemispheres 176.1
2008 Male, age 80, left hemisphere 168.4
2367 Female, age 91, left hemisphere 146.8
Reticular pontine nucleus, caudal
nTPM: 215.8
2092 Male, age 76, both hemispheres 344.1
2559 Male, age 74, both hemispheres 213.8
2457 Female, age 91, both hemispheres 160.4
2332 Male, age 80, right hemisphere 144.8
Reticular pontine nucleus, oral
nTPM: 215.9
1939 Male, age 80, both hemispheres 284.6
2167 Male, age 76, both hemispheres 254.2
2012 Female, age 85, both hemispheres 213.8
2366 Female, age 91, both hemispheres 166.1
2361 Male, age 74, both hemispheres 160.6
Reticulotegmental nucleus
nTPM: 254.4
2325 Male, age 76, both hemispheres 263.0
2322 Female, age 91, both hemispheres 258.4
2333 Male, age 80, both hemispheres 253.9
2452 Male, age 74, both hemispheres 242.4
Spinal trigeminal nucleus, caudal
nTPM: 298.3
2312 Male, age 61, both hemispheres 338.8
2642 Male, age 74, both hemispheres 321.7
2308 Male, age 80, both hemispheres 310.9
2447 Male, age 76, both hemispheres 275.8
2390 Female, age 91, both hemispheres 244.5
Spinal trigeminal nucleus, interpolar
nTPM: 292.2
2066 Male, age 76, right hemisphere 388.3
2033 Male, age 80, both hemispheres 325.8
2625 Male, age 61, both hemispheres 256.5
2386 Female, age 85, both hemispheres 249.0
2389 Female, age 91, both hemispheres 241.2
Spinal trigeminal nucleus, oral
nTPM: 271.4
1978 Male, age 76, both hemispheres 294.8
2737 Female, age 85, both hemispheres 284.1
2164 Male, age 80, both hemispheres 235.2
Spinal vestibular nucleus
nTPM: 293.7
2748 Male, age 76, both hemispheres 374.6
2780 Male, age 80, both hemispheres 306.9
2384 Male, age 74, both hemispheres 294.0
2806 Female, age 85, both hemispheres 289.4
2796 Male, age 61, both hemispheres 267.8
2186 Female, age 91, both hemispheres 229.6
Subcoeruleus area
nTPM: 258.1
2451 Male, age 74, both hemispheres 295.2
2323 Female, age 91, left hemisphere 272.1
1958 Male, age 80, both hemispheres 261.6
2369 Female, age 85, left hemisphere 233.5
2089 Male, age 76, left hemisphere 227.9
Superior olive
nTPM: 223.2
2364 Male, age 74, right hemisphere 270.3
2020 Male, age 76, both hemispheres 268.0
1875 Female, age 85, both hemispheres 206.4
2329 Male, age 80, right hemisphere 201.3
2561 Female, age 91, both hemispheres 170.0
Superior vestibular nucleus
nTPM: 508.3
2061 Male, age 76, both hemispheres 626.8
2383 Male, age 74, both hemispheres 503.7
2015 Male, age 80, both hemispheres 394.3
Ventral medullary reticular nucleus
nTPM: 319.4
2372 Male, age 61, both hemispheres 367.5
2060 Male, age 76, both hemispheres 271.4
Ventral periolivary nuclei
nTPM: 218.4
2023 Male, age 76, both hemispheres 298.5
2130 Female, age 85, both hemispheres 216.2
2165 Male, age 80, both hemispheres 207.1
2794 Female, age 91, left hemisphere 151.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 389.7
2180 Male, age 61, both hemispheres 438.1
1986 Male, age 76, both hemispheres 422.8
2302 Female, age 91, both hemispheres 418.8
2741 Female, age 85, both hemispheres 357.9
2118 Male, age 80, both hemispheres 310.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 242.3
1959 Male, age 76, both hemispheres 294.4
2359 Male, age 61, both hemispheres 277.8
2840 Female, age 85, both hemispheres 255.1
2161 Male, age 80, both hemispheres 229.4
2449 Male, age 74, both hemispheres 202.3
2456 Female, age 91, both hemispheres 194.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 859.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 756.6
FF:10182-103D2 60 years, female 783.2
FF:10165-103B3 76 years, female 730.0
Medulla oblongata
Scaled Tags Per Million: 859.6
FF:10155-103A2 76 years, female 976.5
FF:10038-101F2 18-64 years, mixed 811.2
FF:10174-103C3 60 years, female 791.0
Pons
Scaled Tags Per Million: 374.2
FF:10033-101E6 18-54 years, mixed 374.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 68.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 58.8
Samples: 4

Max nTPM: 72.8
Min nTPM: 48.1
Sample A Female 60.4
Sample B Female 72.8
Sample C Male 54.0
Sample D Male 48.1
Pons
nTPM: 68.1
Samples: 4

Max nTPM: 79.9
Min nTPM: 58.2
Sample A Female 79.9
Sample B Female 58.2
Sample C Male 61.6
Sample D Male 72.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 81.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 81.3
Samples: 4

Max nTPM: 85.5
Min nTPM: 74.0
Sample A Male 85.5
Sample B Male 85.5
Sample C Female 74.0
Sample D Female 80.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.2
77413704 Antisense, RP_070205_01_E07, Mouse strain C57BL/6J (56 days, male) 2.5
70919167 Antisense, RP_050712_04_C11, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 1.3
77413704 Antisense, RP_070205_01_E07, Mouse strain C57BL/6J (56 days, male) 2.6
70919167 Antisense, RP_050712_04_C11, Mouse strain C57BL/6J (56 days, male) 0.0

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