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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:138.9 nTPM
HPA Brain:164.3 nTPM
GTEx:138.9 nTPM
FANTOM5:242.4 Scaled Tags Per Million
Pig:159.3 nTPM
Mouse:202.0 nTPM
Allen mouse:3.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006741
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 159.0
2481 Female, age 94, left hemisphere 241.7
1857 Female, age 85, left hemisphere 187.1
2289 Male, age 61, right hemisphere 177.3
2290 Female, age 72, unknown 153.2
1854 Male, age 80, left hemisphere 151.7
2288 Male, age 75, left hemisphere 130.2
2846 Female, age 79, unknown 115.6
1781 Male, age 74, unknown 115.0
Globus pallidus, externus
nTPM: 164.3
1996 Male, age 80, right hemisphere 210.6
2646 Male, age 61, right hemisphere 207.4
2772 Female, age 79, unknown 145.5
2567 Female, age 72, unknown 140.7
2395 Male, age 75, both hemispheres 117.4
Globus pallidus, internus
nTPM: 164.3
2483 Female, age 94, right hemisphere 250.8
2037 Male, age 80, right hemisphere 175.3
1818 Male, age 74, unknown 162.4
2111 Female, age 85, right hemisphere 146.3
2566 Female, age 72, unknown 143.8
2287 Male, age 75, right hemisphere 137.2
2778 Female, age 91, both hemispheres 134.1
Nucleus accumbens
nTPM: 132.9
1806 Female, age 85, left hemisphere 173.4
1856 Female, age 91, right hemisphere 151.8
2391 Female, age 94, left hemisphere 147.0
2732 Male, age 80, right hemisphere 146.4
2698 Female, age 72, unknown 127.8
2286 Male, age 75, left hemisphere 125.4
1783 Male, age 74, unknown 105.3
2824 Male, age 61, right hemisphere 86.2
Nucleus basalis of Meynert
nTPM: 160.8
2569 Male, age 61, both hemispheres 244.4
2484 Female, age 94, left hemisphere 162.1
2393 Male, age 80, right hemisphere 149.1
2821 Male, age 75, both hemispheres 87.8
Nucleus of the diagonal band
nTPM: 118.1
1979 Male, age 74, unknown 142.3
2775 Male, age 80, right hemisphere 125.3
1812 Female, age 91, both hemispheres 121.2
2195 Female, age 85, both hemispheres 108.0
2029 Male, age 61, right hemisphere 93.7
Putamen
nTPM: 146.8
2647 Male, age 75, left hemisphere 201.7
2482 Female, age 94, left hemisphere 199.2
2489 Female, age 72, unknown 156.0
1937 Female, age 91, right hemisphere 126.1
1829 Male, age 74, unknown 124.0
2466 Female, age 79, unknown 111.2
1838 Male, age 80, right hemisphere 109.1
Septal nuclei
nTPM: 147.7
2199 Male, age 80, right hemisphere 218.4
2394 Male, age 61, left hemisphere 215.4
2059 Female, age 85, both hemispheres 162.3
2009 Female, age 91, both hemispheres 112.1
1960 Male, age 74, unknown 110.8
2031 Female, age 72, unknown 110.2
2629 Female, age 94, right hemisphere 105.0
Stria terminalis, bed nucleus
nTPM: 125.6
2201 Male, age 74, unknown 187.0
1974 Female, age 91, both hemispheres 103.1
2486 Female, age 94, both hemispheres 86.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.9
Samples: 246

Max nTPM: 458.0
Min nTPM: 26.5
Std nTPM: 57.8
Median nTPM: 132.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 458.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 351.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 295.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 294.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 277.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 273.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 263.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 262.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 258.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 252.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 251.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 237.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 234.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 234.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 230.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 227.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 226.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 225.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 225.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 224.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 221.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 221.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 220.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 218.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 215.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 214.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 210.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 210.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 209.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 209.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 209.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 203.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 203.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 202.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 199.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 197.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 197.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 193.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 192.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 191.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 190.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 190.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 190.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 186.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 185.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 184.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 183.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 182.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 178.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 177.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 175.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 173.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 172.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 172.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 171.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 170.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 170.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 169.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 168.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 167.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 167.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 166.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 164.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 163.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 163.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 163.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 162.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 161.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 160.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 160.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 159.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 159.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 157.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 156.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 156.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 156.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 155.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 153.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 153.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 152.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 152.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 152.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 151.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 151.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 150.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 150.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 150.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 150.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 146.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 145.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 145.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 145.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 144.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 144.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 143.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 143.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 142.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 142.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 141.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 141.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 141.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 139.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 138.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 138.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 137.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 136.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 136.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 136.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 135.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 134.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 133.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 132.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 132.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 131.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 131.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 130.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 129.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 127.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 125.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 125.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 125.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 124.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 124.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 123.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 121.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 120.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 120.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 120.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 119.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 119.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 119.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 118.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 117.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 117.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 117.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 115.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 115.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 114.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 114.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 114.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 113.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 112.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 112.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 111.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 110.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 109.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 107.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 107.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 106.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 106.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 106.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 106.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 105.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 105.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 104.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 104.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 103.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 103.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 102.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 101.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 101.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 100.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 100.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 97.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 96.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 96.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 94.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 93.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 93.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 93.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 92.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 91.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 90.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 90.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 89.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 88.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 87.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 87.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 86.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 86.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 86.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 84.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 84.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 84.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 83.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 82.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 82.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 80.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 80.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 80.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 78.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 77.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 77.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 76.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 76.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 75.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 72.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 71.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 69.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 69.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 64.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 64.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 64.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 57.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 54.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 44.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 38.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 33.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 26.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 123.9
Samples: 246

Max nTPM: 413.3
Min nTPM: 33.0
Std nTPM: 55.9
Median nTPM: 109.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 413.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 387.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 290.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 286.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 274.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 273.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 262.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 260.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 253.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 247.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 244.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 239.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 234.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 232.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 225.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 218.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 217.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 214.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 213.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 211.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 204.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 203.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 199.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 199.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 198.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 198.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 197.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 194.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 194.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 192.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 191.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 188.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 188.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 185.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 182.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 181.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 179.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 178.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 176.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 175.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 173.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 169.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 168.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 167.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 165.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 165.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 163.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 162.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 159.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 159.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 156.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 156.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 155.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 155.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 154.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 150.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 148.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 148.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 144.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 144.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 143.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 141.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 141.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 141.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 140.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 139.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 138.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 137.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 137.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 137.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 135.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 135.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 135.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 135.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 134.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 133.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 133.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 131.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 130.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 129.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 129.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 127.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 127.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 126.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 126.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 125.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 125.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 125.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 124.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 123.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 122.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 122.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 122.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 122.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 120.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 120.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 119.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 118.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 117.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 117.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 117.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 117.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 117.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 115.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 115.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 115.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 113.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 113.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 112.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 111.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 111.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 111.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 111.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 110.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 110.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 110.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 109.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 109.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 109.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 109.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 109.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 108.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 108.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 108.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 106.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 106.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 106.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 106.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 105.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 105.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 105.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 105.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 105.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 105.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 104.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 104.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 104.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 104.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 104.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 104.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 103.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 102.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 102.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 102.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 101.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 101.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 101.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 101.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 100.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 100.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 100.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 99.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 99.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 99.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 99.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 98.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 97.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 97.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 97.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 97.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 96.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 95.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 94.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 93.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 93.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 92.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 92.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 91.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 90.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 89.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 88.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 88.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 88.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 88.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 87.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 87.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 87.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 87.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 87.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 87.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 87.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 87.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 86.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 86.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 86.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 86.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 86.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 85.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 85.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 85.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 84.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 83.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 82.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 82.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 82.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 81.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 81.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 81.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 80.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 79.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 79.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 79.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 77.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 76.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 74.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 74.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 74.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 73.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 72.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 72.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 71.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 71.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 71.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 71.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 70.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 69.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 68.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 68.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 67.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 65.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 65.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 63.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 63.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 63.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 62.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 62.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 60.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 59.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 58.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 56.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 55.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 50.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 48.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 47.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 34.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 33.0
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Brain - Putamen (basal ganglia)
Average nTPM: 131.0
Samples: 205

Max nTPM: 360.6
Min nTPM: 20.8
Std nTPM: 58.9
Median nTPM: 122.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 360.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 331.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 314.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 308.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 284.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 274.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 265.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 260.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 259.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 245.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 235.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 230.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 228.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 221.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 219.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 210.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 210.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 210.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 209.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 207.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 205.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 203.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 202.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 201.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 199.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 196.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 196.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 196.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 194.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 193.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 192.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 188.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 182.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 180.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 179.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 178.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 178.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 178.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 177.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 175.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 174.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 172.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 171.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 170.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 170.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 168.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 166.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 165.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 165.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 164.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 163.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 161.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 161.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 161.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 161.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 159.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 159.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 158.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 156.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 156.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 155.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 155.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 153.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 152.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 151.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 150.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 149.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 149.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 149.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 148.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 147.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 146.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 145.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 141.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 140.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 140.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 140.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 139.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 138.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 138.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 137.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 136.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 136.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 135.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 135.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 133.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 133.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 132.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 132.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 131.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 130.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 128.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 128.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 128.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 127.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 127.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 126.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 124.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 123.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 122.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 122.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 122.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 122.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 121.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 121.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 121.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 118.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 118.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 117.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 116.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 116.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 115.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 115.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 115.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 114.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 114.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 113.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 112.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 111.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 111.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 110.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 110.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 110.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 110.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 110.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 108.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 108.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 107.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 105.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 105.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 105.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 105.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 105.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 105.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 103.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 102.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 100.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 100.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 99.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 96.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 96.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 95.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 95.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 94.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 93.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 93.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 92.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 91.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 90.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 90.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 89.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 88.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 86.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 85.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 85.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 85.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 84.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 84.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 84.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 83.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 82.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 82.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 81.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 81.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 80.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 77.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 77.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 77.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 75.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 75.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 73.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 70.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 69.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 68.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 65.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 65.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 61.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 60.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 59.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 59.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 56.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 56.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 56.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 54.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 52.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 51.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 50.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 46.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 34.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 21.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 20.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

242.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 242.4
FF:10164-103B2 76 years, female 242.4
Nucleus accumbens
Scaled Tags Per Million: 129.3
FF:10037-101F1 23-56 years, mixed 129.3
Putamen
Scaled Tags Per Million: 155.3
FF:10176-103C5 60 years, female 155.3
Globus pallidus
Scaled Tags Per Million: 147.0
FF:10161-103A8 76 years, female 179.4
FF:10175-103C4 60 years, female 114.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
Pig sample Sample description nTPM
Caudate
nTPM: 132.1
Samples: 4

Max nTPM: 153.6
Min nTPM: 99.3
Sample A Female 99.3
Sample B Female 153.6
Sample C Male 149.5
Sample D Male 125.8
Putamen
nTPM: 119.9
Samples: 4

Max nTPM: 142.9
Min nTPM: 95.2
Sample A Female 142.9
Sample B Female 95.2
Sample C Male 119.0
Sample D Male 122.6
Septum
nTPM: 159.3
Samples: 4

Max nTPM: 207.5
Min nTPM: 116.7
Sample A Female 116.7
Sample B Female 154.0
Sample C Male 207.5
Sample D Male 158.9
Ventral pallidum
nTPM: 144.2
Samples: 4

Max nTPM: 220.0
Min nTPM: 90.0
Sample A Female 90.0
Sample B Female 137.7
Sample C Male 220.0
Sample D Male 129.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 131.0
Samples: 4

Max nTPM: 147.1
Min nTPM: 118.1
Sample A Male 118.1
Sample B Male 128.1
Sample C Female 130.6
Sample D Female 147.1
Septum
nTPM: 202.0
Samples: 4

Max nTPM: 235.8
Min nTPM: 168.6
Sample A Male 168.6
Sample B Male 235.8
Sample C Female 209.6
Sample D Female 193.8
Ventral forebrain
nTPM: 138.1
Samples: 4

Max nTPM: 152.8
Min nTPM: 125.6
Sample A Male 125.6
Sample B Male 146.1
Sample C Female 152.8
Sample D Female 128.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.5
69015290 Antisense, RP_050310_02_F08, Mouse strain C57BL/6J (56 days, male) 3.5
Pallidum
Expression energy: 3.4
69015290 Antisense, RP_050310_02_F08, Mouse strain C57BL/6J (56 days, male) 3.4

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