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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:11.4 nTPM
HPA Brain:42.8 nTPM
GTEx:11.4 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:25.5 nTPM
Mouse:36.0 nTPM
Allen mouse:2.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB018143
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 28.8
2481 Female, age 94, left hemisphere 34.7
1857 Female, age 85, left hemisphere 32.1
2290 Female, age 72, unknown 31.4
2288 Male, age 75, left hemisphere 30.1
2289 Male, age 61, right hemisphere 28.8
1854 Male, age 80, left hemisphere 25.6
1781 Male, age 74, unknown 25.5
2846 Female, age 79, unknown 22.1
Globus pallidus, externus
nTPM: 26.4
1996 Male, age 80, right hemisphere 31.3
2646 Male, age 61, right hemisphere 27.8
2772 Female, age 79, unknown 26.8
2567 Female, age 72, unknown 23.5
2395 Male, age 75, both hemispheres 22.7
Globus pallidus, internus
nTPM: 30.0
2778 Female, age 91, both hemispheres 37.3
2037 Male, age 80, right hemisphere 36.5
2111 Female, age 85, right hemisphere 31.4
1818 Male, age 74, unknown 29.4
2566 Female, age 72, unknown 28.3
2483 Female, age 94, right hemisphere 24.1
2287 Male, age 75, right hemisphere 22.8
Nucleus accumbens
nTPM: 31.3
2391 Female, age 94, left hemisphere 35.3
2732 Male, age 80, right hemisphere 35.1
1806 Female, age 85, left hemisphere 33.7
2286 Male, age 75, left hemisphere 30.6
2698 Female, age 72, unknown 30.2
1783 Male, age 74, unknown 29.1
2824 Male, age 61, right hemisphere 28.2
1856 Female, age 91, right hemisphere 27.9
Nucleus basalis of Meynert
nTPM: 30.6
2821 Male, age 75, both hemispheres 35.4
2484 Female, age 94, left hemisphere 32.7
2569 Male, age 61, both hemispheres 28.1
2393 Male, age 80, right hemisphere 26.0
Nucleus of the diagonal band
nTPM: 37.7
1979 Male, age 74, unknown 42.4
2029 Male, age 61, right hemisphere 38.6
1812 Female, age 91, both hemispheres 36.8
2195 Female, age 85, both hemispheres 36.3
2775 Male, age 80, right hemisphere 34.4
Putamen
nTPM: 22.1
2482 Female, age 94, left hemisphere 28.9
1937 Female, age 91, right hemisphere 26.3
1838 Male, age 80, right hemisphere 22.4
2489 Female, age 72, unknown 20.8
1829 Male, age 74, unknown 20.6
2466 Female, age 79, unknown 19.2
2647 Male, age 75, left hemisphere 16.3
Septal nuclei
nTPM: 42.8
2059 Female, age 85, both hemispheres 49.3
2199 Male, age 80, right hemisphere 49.0
2394 Male, age 61, left hemisphere 47.0
2031 Female, age 72, unknown 41.0
1960 Male, age 74, unknown 40.0
2009 Female, age 91, both hemispheres 37.0
2629 Female, age 94, right hemisphere 36.3
Stria terminalis, bed nucleus
nTPM: 35.4
2201 Male, age 74, unknown 36.6
1974 Female, age 91, both hemispheres 35.4
2486 Female, age 94, both hemispheres 34.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 11.4
Samples: 246

Max nTPM: 30.1
Min nTPM: 1.9
Std nTPM: 5.1
Median nTPM: 11.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 26.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 26.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 24.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 23.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 22.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 22.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 21.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 21.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 20.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 20.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 19.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 19.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 19.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 19.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 18.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 18.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 18.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 18.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 17.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 17.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 17.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 17.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 17.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 17.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 17.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 17.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 16.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 16.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 16.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 16.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 16.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 16.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 16.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 16.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 16.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 16.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 16.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 15.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 15.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 15.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 15.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 14.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 14.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 14.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 14.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 14.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 14.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 13.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 13.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 13.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 13.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 13.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 13.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 13.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 13.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 13.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 13.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 13.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 12.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 12.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 12.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 12.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 12.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 12.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 12.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 12.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 12.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 12.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 12.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 12.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 12.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 12.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 11.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 11.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 11.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 11.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 11.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 11.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 11.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 11.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 11.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 11.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 11.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 11.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 11.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 11.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 11.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 11.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 11.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 10.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 10.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 10.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 10.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 10.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 10.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 10.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 10.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 10.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 10.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 10.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 10.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 10.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 10.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 9.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 9.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 9.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 9.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 9.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 9.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 9.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 9.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 9.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 9.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 9.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 9.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 9.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 8.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 8.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 8.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 8.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 8.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 8.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 8.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 8.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 8.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 8.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 8.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 8.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 8.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 8.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 8.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 8.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 7.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 7.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 7.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 7.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 7.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 7.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 7.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 7.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 7.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 7.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 7.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 7.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 7.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 6.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 6.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 6.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 6.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 6.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 6.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 6.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 6.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 5.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 5.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 5.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 5.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 5.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 5.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 5.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 5.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 4.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 4.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 4.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 4.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 4.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 4.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 4.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 4.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 3.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 3.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.2
Samples: 246

Max nTPM: 32.3
Min nTPM: 0.7
Std nTPM: 5.2
Median nTPM: 10.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 32.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 32.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 26.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 23.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 23.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 21.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 21.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 21.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 21.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 20.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 19.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 19.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 19.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 19.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 18.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 18.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 18.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 18.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 18.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 18.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 18.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 18.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 18.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 17.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 17.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 17.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 17.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 17.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 17.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 17.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 16.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 16.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 16.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 16.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 16.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 15.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 15.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 15.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 15.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 15.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 15.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 15.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 15.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 14.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 14.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 14.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 14.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 14.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 14.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 14.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 14.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 14.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 14.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 14.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 13.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 13.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 13.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 13.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 13.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 13.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 13.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 13.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 13.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 13.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 13.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 13.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 13.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 12.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 12.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 12.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 12.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 12.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 12.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 12.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 12.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 12.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 11.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 11.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 11.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 11.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 11.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 11.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 11.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 11.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 11.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 11.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 11.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 11.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 10.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 10.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 10.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 10.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 10.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 10.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 10.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 10.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 10.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 10.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 10.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 10.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 10.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 10.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 10.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 10.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 10.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 10.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 9.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 9.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 9.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 9.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 9.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 9.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 9.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 9.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 9.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 9.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 9.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 9.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 9.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 9.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 9.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 9.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 9.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 9.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 9.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 8.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 8.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 8.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 8.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 8.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 8.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 8.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 8.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 8.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 8.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 8.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 8.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 8.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 8.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 8.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 8.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 7.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 7.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 7.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 7.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 7.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 7.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 7.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 7.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 7.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 7.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 7.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 7.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 7.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 7.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 7.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 7.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 7.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 7.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 7.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 7.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 7.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 7.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 7.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 7.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 7.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 7.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 7.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 6.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 6.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 6.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 6.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 6.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 6.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 6.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 6.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 6.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 6.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 6.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 6.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 6.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 6.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 6.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 6.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 6.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 6.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 5.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 5.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 5.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 5.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 5.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 5.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 5.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 5.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 4.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 4.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 4.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 3.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 3.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 3.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 3.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 3.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 2.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 0.7
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Brain - Putamen (basal ganglia)
Average nTPM: 9.7
Samples: 205

Max nTPM: 53.5
Min nTPM: 1.1
Std nTPM: 5.8
Median nTPM: 8.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 39.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 23.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 22.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 21.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 18.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 17.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 17.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 17.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 16.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 16.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 15.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 15.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 15.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 15.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 15.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 14.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 14.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 14.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 14.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 13.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 13.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 13.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 13.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 13.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 13.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 12.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 12.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 12.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 12.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 12.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 11.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 11.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 11.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 11.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 11.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 11.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 11.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 11.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 10.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 10.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 10.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 10.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 10.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 10.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 10.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 10.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 10.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 9.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 9.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 9.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 9.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 9.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 8.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 8.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 8.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 8.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 7.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 7.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 7.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 7.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 7.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 7.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 7.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 7.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 6.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 6.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 6.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 6.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 6.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 6.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 6.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 6.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 6.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 6.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 6.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 5.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 5.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 5.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 5.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 5.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 5.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 4.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 4.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 4.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 4.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 4.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 4.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 4.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 3.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 3.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 3.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 3.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 2.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 2.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.4
FF:10164-103B2 76 years, female 36.4
Nucleus accumbens
Scaled Tags Per Million: 40.9
FF:10037-101F1 23-56 years, mixed 40.9
Putamen
Scaled Tags Per Million: 30.8
FF:10176-103C5 60 years, female 30.8
Globus pallidus
Scaled Tags Per Million: 36.6
FF:10161-103A8 76 years, female 38.7
FF:10175-103C4 60 years, female 34.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.5
Pig sample Sample description nTPM
Caudate
nTPM: 21.6
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.4
Sample A Female 19.4
Sample B Female 23.0
Sample C Male 23.2
Sample D Male 20.6
Putamen
nTPM: 24.0
Samples: 4

Max nTPM: 28.8
Min nTPM: 21.5
Sample A Female 24.2
Sample B Female 21.5
Sample C Male 28.8
Sample D Male 21.6
Septum
nTPM: 25.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 23.7
Sample A Female 25.8
Sample B Female 23.7
Sample C Male 25.3
Sample D Male 27.2
Ventral pallidum
nTPM: 23.5
Samples: 4

Max nTPM: 27.3
Min nTPM: 19.7
Sample A Female 27.3
Sample B Female 19.7
Sample C Male 22.3
Sample D Male 24.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 31.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 29.1
Sample C Female 32.9
Sample D Female 38.0
Septum
nTPM: 36.0
Samples: 4

Max nTPM: 38.7
Min nTPM: 32.6
Sample A Male 32.6
Sample B Male 35.6
Sample C Female 37.0
Sample D Female 38.7
Ventral forebrain
nTPM: 31.2
Samples: 4

Max nTPM: 32.0
Min nTPM: 28.9
Sample A Male 28.9
Sample B Male 32.0
Sample C Female 32.0
Sample D Female 31.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
79354743 Antisense, RP_070208_04_B08, Mouse strain C57BL/6J (56 days, male) 2.0
77280309 Antisense, RP_070116_01_B01, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 2.1
79354743 Antisense, RP_070208_04_B08, Mouse strain C57BL/6J (56 days, male) 2.3
77280309 Antisense, RP_070116_01_B01, Mouse strain C57BL/6J (56 days, male) 1.8

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