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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.9 nTPM
HPA Brain:32.1 nTPM
GTEx:54.9 nTPM
FANTOM5:143.6 Scaled Tags Per Million
Pig:7.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA070413Antibody CAB000459
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 18.6
2481 Female, age 94, left hemisphere 24.8
2846 Female, age 79, unknown 23.1
2288 Male, age 75, left hemisphere 20.0
1857 Female, age 85, left hemisphere 19.8
2290 Female, age 72, unknown 18.7
1854 Male, age 80, left hemisphere 16.5
1781 Male, age 74, unknown 14.3
2289 Male, age 61, right hemisphere 11.5
Globus pallidus, externus
nTPM: 32.1
2395 Male, age 75, both hemispheres 55.7
1996 Male, age 80, right hemisphere 39.3
2772 Female, age 79, unknown 34.6
2646 Male, age 61, right hemisphere 16.5
2567 Female, age 72, unknown 14.5
Globus pallidus, internus
nTPM: 24.7
2037 Male, age 80, right hemisphere 31.0
1818 Male, age 74, unknown 29.9
2778 Female, age 91, both hemispheres 29.3
2111 Female, age 85, right hemisphere 22.2
2483 Female, age 94, right hemisphere 21.8
2287 Male, age 75, right hemisphere 21.3
2566 Female, age 72, unknown 17.6
Nucleus accumbens
nTPM: 18.5
2391 Female, age 94, left hemisphere 26.0
2698 Female, age 72, unknown 23.6
2286 Male, age 75, left hemisphere 20.3
2732 Male, age 80, right hemisphere 18.4
1856 Female, age 91, right hemisphere 16.1
1806 Female, age 85, left hemisphere 15.4
1783 Male, age 74, unknown 14.2
2824 Male, age 61, right hemisphere 13.9
Nucleus basalis of Meynert
nTPM: 18.1
2821 Male, age 75, both hemispheres 25.2
2569 Male, age 61, both hemispheres 17.5
2393 Male, age 80, right hemisphere 17.3
2484 Female, age 94, left hemisphere 12.6
Nucleus of the diagonal band
nTPM: 12.6
1812 Female, age 91, both hemispheres 17.2
2775 Male, age 80, right hemisphere 14.0
1979 Male, age 74, unknown 13.5
2195 Female, age 85, both hemispheres 9.7
2029 Male, age 61, right hemisphere 8.6
Putamen
nTPM: 17.9
2482 Female, age 94, left hemisphere 28.3
2466 Female, age 79, unknown 21.2
1829 Male, age 74, unknown 19.7
2489 Female, age 72, unknown 16.0
1937 Female, age 91, right hemisphere 15.5
2647 Male, age 75, left hemisphere 12.4
1838 Male, age 80, right hemisphere 12.3
Septal nuclei
nTPM: 15.0
2031 Female, age 72, unknown 16.8
2199 Male, age 80, right hemisphere 16.7
2009 Female, age 91, both hemispheres 16.3
2629 Female, age 94, right hemisphere 15.5
2059 Female, age 85, both hemispheres 14.0
2394 Male, age 61, left hemisphere 13.5
1960 Male, age 74, unknown 12.1
Stria terminalis, bed nucleus
nTPM: 12.5
2201 Male, age 74, unknown 14.1
1974 Female, age 91, both hemispheres 11.9
2486 Female, age 94, both hemispheres 11.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 48.3
Samples: 246

Max nTPM: 194.9
Min nTPM: 22.2
Std nTPM: 13.8
Median nTPM: 46.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 194.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 103.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 102.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 101.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 81.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 74.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 74.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 65.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 64.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 61.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 61.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 60.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 60.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 60.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 59.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 59.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 59.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 59.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 58.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 58.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 58.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 58.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 57.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 57.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 57.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 56.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 56.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 56.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 56.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 54.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 54.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 54.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 54.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 54.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 54.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 53.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 52.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 52.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 52.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 51.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 51.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 51.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 50.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 50.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 50.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 49.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 49.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 49.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 49.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 49.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 49.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 49.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 49.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 48.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 48.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 48.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 48.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 47.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 47.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 46.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 46.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 46.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 46.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 46.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 46.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 46.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 46.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 46.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 46.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 45.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 45.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 45.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 45.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 45.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 44.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 44.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 44.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 44.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 44.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 44.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 44.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 44.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 44.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 44.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 43.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 43.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 43.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 43.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 42.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 42.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 42.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 42.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 42.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 42.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 42.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 42.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 42.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 41.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 41.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 41.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 41.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 40.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 40.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 40.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 40.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 40.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 40.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 39.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 39.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 39.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 38.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 38.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 38.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 38.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 37.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 37.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 37.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 36.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 36.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 35.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 35.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 34.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 34.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 33.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 33.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 33.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 28.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 27.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 22.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 43.1
Samples: 246

Max nTPM: 341.4
Min nTPM: 18.0
Std nTPM: 23.1
Median nTPM: 39.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 341.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 149.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 96.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 95.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 91.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 86.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 80.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 75.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 71.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 69.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 68.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 63.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 60.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 59.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 59.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 59.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 59.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 58.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 57.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 56.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 55.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 54.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 54.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 52.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 52.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 52.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 51.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 50.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 50.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 49.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 49.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 49.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 49.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 49.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 49.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 48.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 48.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 48.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 48.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 48.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 48.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 47.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 47.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 47.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 47.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 46.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 46.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 45.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 45.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 45.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 45.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 45.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 45.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 45.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 44.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 44.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 44.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 44.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 44.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 43.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 43.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 43.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 43.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 43.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 43.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 42.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 42.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 42.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 41.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 41.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 41.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 41.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 41.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 41.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 41.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 40.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 40.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 40.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 40.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 40.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 40.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 40.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 40.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 40.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 40.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 39.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 39.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 39.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 39.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 39.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 39.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 39.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 39.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 39.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 39.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 39.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 39.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 39.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 39.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 39.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 39.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 38.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 38.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 38.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 38.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 38.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 38.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 38.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 38.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 38.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 38.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 38.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 38.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 38.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 38.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 38.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 38.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 38.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 37.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 37.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 37.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 37.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 37.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 37.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 37.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 37.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 37.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 37.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 37.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 37.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 37.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 36.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 36.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 36.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 36.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 36.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 36.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 36.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 36.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 36.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 35.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 35.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 35.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 35.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 35.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 35.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 35.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 35.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 35.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 35.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 34.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 34.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 34.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 34.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 34.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 34.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 34.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 34.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 34.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 34.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 33.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 33.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 33.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 33.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 33.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 33.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 33.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 32.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 31.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 31.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 31.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 31.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 31.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 31.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 31.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 31.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 31.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 30.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 30.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 29.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 29.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 28.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 28.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 28.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 27.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 27.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 26.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 26.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 26.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 26.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 25.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 25.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 23.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 21.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 20.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.0
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Brain - Putamen (basal ganglia)
Average nTPM: 54.9
Samples: 205

Max nTPM: 273.6
Min nTPM: 28.1
Std nTPM: 22.8
Median nTPM: 51.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 273.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 176.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 143.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 134.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 130.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 82.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 80.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 76.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 73.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 72.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 71.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 71.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 70.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 69.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 68.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 68.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 67.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 66.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 66.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 65.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 65.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 65.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 65.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 64.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 64.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 63.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 62.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 62.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 61.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 61.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 61.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 61.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 59.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 58.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 57.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 57.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 56.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 56.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 56.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 56.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 56.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 56.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 56.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 56.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 55.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 55.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 55.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 55.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 55.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 55.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 55.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 55.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 54.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 54.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 54.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 54.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 54.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 54.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 54.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 54.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 53.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 53.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 53.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 53.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 53.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 52.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 52.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 52.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 52.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 51.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 51.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 51.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 51.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 51.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 51.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 51.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 51.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 50.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 50.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 50.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 49.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 49.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 49.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 48.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 48.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 48.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 48.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 48.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 47.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 47.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 47.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 47.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 47.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 46.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 46.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 46.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 46.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 46.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 46.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 45.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 45.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 45.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 45.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 45.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 45.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 45.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 44.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 44.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 44.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 44.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 44.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 43.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 43.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 43.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 42.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 42.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 42.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 41.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 41.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 41.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 41.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 41.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 40.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 40.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 40.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 40.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 39.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 39.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 39.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 38.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 38.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 37.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 37.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 37.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 35.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 35.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 34.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 33.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 33.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 33.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 33.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 32.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 31.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

143.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.1
FF:10164-103B2 76 years, female 36.1
Nucleus accumbens
Scaled Tags Per Million: 40.8
FF:10037-101F1 23-56 years, mixed 40.8
Putamen
Scaled Tags Per Million: 40.4
FF:10176-103C5 60 years, female 40.4
Globus pallidus
Scaled Tags Per Million: 143.6
FF:10175-103C4 60 years, female 207.1
FF:10161-103A8 76 years, female 80.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.4
Pig sample Sample description nTPM
Caudate
nTPM: 7.4
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.1
Sample A Female 8.2
Sample B Female 7.4
Sample C Male 6.1
Sample D Male 8.0
Putamen
nTPM: 6.7
Samples: 4

Max nTPM: 8.4
Min nTPM: 4.5
Sample A Female 7.2
Sample B Female 8.4
Sample C Male 4.5
Sample D Male 6.5
Septum
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.0
Sample A Female 7.0
Sample B Female 6.9
Sample C Male 6.0
Sample D Male 8.3
Ventral pallidum
nTPM: 7.4
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.0
Sample A Female 8.9
Sample B Female 6.4
Sample C Male 6.0
Sample D Male 8.1

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The Human Protein Atlas project is funded
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