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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.0 nTPM
HPA Brain:83.8 nTPM
GTEx:54.0 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:15.0 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010638Antibody HPA011929Antibody CAB015341
Glial cells HighNot detectedMedium
Neuronal cells High-Medium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 42.1
2481 Female, age 94, left hemisphere 51.9
1857 Female, age 85, left hemisphere 45.9
1781 Male, age 74, unknown 43.6
2290 Female, age 72, unknown 41.2
1854 Male, age 80, left hemisphere 41.1
2288 Male, age 75, left hemisphere 39.3
2289 Male, age 61, right hemisphere 38.9
2846 Female, age 79, unknown 35.1
Globus pallidus, externus
nTPM: 50.3
1996 Male, age 80, right hemisphere 58.6
2772 Female, age 79, unknown 57.9
2646 Male, age 61, right hemisphere 50.8
2395 Male, age 75, both hemispheres 45.4
2567 Female, age 72, unknown 38.7
Globus pallidus, internus
nTPM: 49.2
2483 Female, age 94, right hemisphere 59.6
2287 Male, age 75, right hemisphere 57.1
2037 Male, age 80, right hemisphere 51.7
1818 Male, age 74, unknown 49.6
2778 Female, age 91, both hemispheres 47.7
2566 Female, age 72, unknown 40.4
2111 Female, age 85, right hemisphere 38.2
Nucleus accumbens
nTPM: 46.6
2732 Male, age 80, right hemisphere 57.0
2698 Female, age 72, unknown 50.9
1856 Female, age 91, right hemisphere 49.3
1806 Female, age 85, left hemisphere 45.8
2286 Male, age 75, left hemisphere 45.5
2391 Female, age 94, left hemisphere 43.5
1783 Male, age 74, unknown 40.7
2824 Male, age 61, right hemisphere 40.3
Nucleus basalis of Meynert
nTPM: 47.3
2569 Male, age 61, both hemispheres 55.0
2484 Female, age 94, left hemisphere 48.3
2821 Male, age 75, both hemispheres 43.5
2393 Male, age 80, right hemisphere 42.5
Nucleus of the diagonal band
nTPM: 83.8
1979 Male, age 74, unknown 92.2
2195 Female, age 85, both hemispheres 90.6
1812 Female, age 91, both hemispheres 89.3
2775 Male, age 80, right hemisphere 88.6
2029 Male, age 61, right hemisphere 58.1
Putamen
nTPM: 38.3
2482 Female, age 94, left hemisphere 46.2
2647 Male, age 75, left hemisphere 40.7
1838 Male, age 80, right hemisphere 38.1
1829 Male, age 74, unknown 37.9
1937 Female, age 91, right hemisphere 37.9
2489 Female, age 72, unknown 35.7
2466 Female, age 79, unknown 31.6
Septal nuclei
nTPM: 78.7
1960 Male, age 74, unknown 88.5
2059 Female, age 85, both hemispheres 88.2
2199 Male, age 80, right hemisphere 83.2
2009 Female, age 91, both hemispheres 79.9
2629 Female, age 94, right hemisphere 78.0
2031 Female, age 72, unknown 75.5
2394 Male, age 61, left hemisphere 57.6
Stria terminalis, bed nucleus
nTPM: 71.5
1974 Female, age 91, both hemispheres 76.0
2201 Male, age 74, unknown 74.3
2486 Female, age 94, both hemispheres 64.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.6
Samples: 246

Max nTPM: 92.1
Min nTPM: 24.5
Std nTPM: 10.2
Median nTPM: 43.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 92.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 86.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 72.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 71.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 69.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 69.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 68.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 62.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 60.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 59.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 59.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 58.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 58.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 57.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 56.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 56.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 55.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 55.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 54.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 53.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 53.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 53.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 52.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 51.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 51.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 51.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 51.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 51.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 51.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 50.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 50.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 50.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 50.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 50.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 49.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 49.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 49.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 49.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 48.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 48.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 48.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 48.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 48.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 47.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 46.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 46.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 45.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 45.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 45.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 45.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 45.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 45.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 44.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 44.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 44.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 44.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 44.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 44.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 43.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 43.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 43.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 43.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 42.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 42.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 42.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 42.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 42.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 42.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 42.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 41.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 41.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 41.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 41.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 41.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 41.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 40.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 40.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 40.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 40.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 40.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 40.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 39.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 39.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 39.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 39.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 39.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 39.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 39.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 39.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 38.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 38.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 38.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 38.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 38.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 38.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 37.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 37.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 37.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 37.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 36.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 36.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 36.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 36.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 35.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 35.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 35.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 35.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 35.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 35.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 35.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 34.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 34.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 33.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 33.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 33.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 33.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 33.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 33.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 33.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 33.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 33.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 33.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 33.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 32.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 32.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 32.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 32.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 31.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 31.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 31.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 30.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 29.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 29.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 29.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 29.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.0
Samples: 246

Max nTPM: 114.0
Min nTPM: 29.4
Std nTPM: 12.0
Median nTPM: 51.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 114.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 98.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 93.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 91.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 89.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 88.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 87.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 85.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 82.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 79.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 79.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 78.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 78.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 77.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 76.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 74.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 72.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 71.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 71.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 70.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 69.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 69.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 69.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 68.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 67.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 67.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 66.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 66.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 65.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 65.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 65.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 65.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 65.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 65.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 64.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 63.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 63.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 63.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 63.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 63.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 62.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 62.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 62.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 62.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 62.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 61.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 61.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 61.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 61.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 60.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 60.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 59.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 59.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 59.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 59.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 59.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 59.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 59.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 59.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 59.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 59.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 58.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 58.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 58.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 58.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 58.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 58.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 58.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 57.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 57.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 57.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 57.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 57.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 56.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 55.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 55.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 55.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 55.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 55.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 55.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 55.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 55.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 55.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 55.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 55.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 55.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 55.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 54.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 54.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 54.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 54.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 54.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 54.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 53.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 53.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 53.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 53.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 52.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 52.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 52.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 52.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 52.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 52.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 52.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 52.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 51.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 51.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 51.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 51.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 51.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 51.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 51.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 51.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 51.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 51.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 51.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 51.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 50.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 50.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 50.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 50.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 50.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 50.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 50.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 50.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 50.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 50.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 50.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 50.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 49.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 49.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 49.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 49.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 49.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 49.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 49.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 49.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 49.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 48.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 48.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 48.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 48.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 48.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 47.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 47.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 47.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 47.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 47.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 47.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 46.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 46.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 46.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 46.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 46.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 46.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 46.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 46.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 46.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 45.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 45.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 45.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 45.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 45.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 45.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 45.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 45.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 44.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 44.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 44.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 44.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 44.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 44.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 44.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 44.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 44.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 43.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 43.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 43.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 43.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 43.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 43.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 42.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 42.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 42.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 42.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 42.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 42.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 42.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 41.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 41.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 41.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 41.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 41.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 40.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 40.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 40.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 39.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 39.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 38.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 38.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 38.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 38.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 37.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 36.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 35.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 34.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 33.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 33.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 29.4
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Brain - Putamen (basal ganglia)
Average nTPM: 38.6
Samples: 205

Max nTPM: 70.9
Min nTPM: 22.0
Std nTPM: 8.0
Median nTPM: 38.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 70.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 58.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 57.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 56.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 54.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 54.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 52.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 51.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 51.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 51.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 50.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 50.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 49.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 49.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 48.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 48.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 48.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 48.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 47.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 47.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 47.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 47.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 46.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 45.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 45.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 45.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 45.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 45.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 45.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 45.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 44.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 44.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 43.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 43.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 42.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 42.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 42.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 42.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 42.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 42.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 42.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 41.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 41.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 41.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 41.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 41.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 41.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 40.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 40.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 40.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 40.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 40.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 40.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 39.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 39.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 39.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 39.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 39.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 39.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 39.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 39.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 38.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 38.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 37.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 37.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 37.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 37.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 37.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 37.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 37.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 37.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 36.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 36.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 36.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 36.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 36.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 36.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 35.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 35.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 35.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 35.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 35.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 35.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 35.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 35.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 34.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 34.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 34.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 34.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 34.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 34.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 34.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 33.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 33.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 33.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 33.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 33.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 33.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 32.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 32.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 32.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 32.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 32.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 32.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 31.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 31.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 31.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 31.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 31.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 31.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 31.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 31.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 31.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 31.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 31.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 30.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 30.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 30.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 30.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 30.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 30.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 29.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 29.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 28.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 28.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 28.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 28.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 28.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 27.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 27.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 27.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 27.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 27.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 26.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 26.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 26.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 26.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 26.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 26.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 24.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 24.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 23.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 22.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 22.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 22.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.3
FF:10164-103B2 76 years, female 68.3
Nucleus accumbens
Scaled Tags Per Million: 57.5
FF:10037-101F1 23-56 years, mixed 57.5
Putamen
Scaled Tags Per Million: 68.3
FF:10176-103C5 60 years, female 68.3
Globus pallidus
Scaled Tags Per Million: 47.8
FF:10161-103A8 76 years, female 60.2
FF:10175-103C4 60 years, female 35.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.5
Pig sample Sample description nTPM
Caudate
nTPM: 29.6
Samples: 4

Max nTPM: 35.6
Min nTPM: 24.5
Sample A Female 27.5
Sample B Female 30.7
Sample C Male 35.6
Sample D Male 24.5
Putamen
nTPM: 33.6
Samples: 4

Max nTPM: 42.0
Min nTPM: 28.3
Sample A Female 34.5
Sample B Female 29.7
Sample C Male 42.0
Sample D Male 28.3
Septum
nTPM: 35.5
Samples: 4

Max nTPM: 49.0
Min nTPM: 28.6
Sample A Female 30.8
Sample B Female 33.6
Sample C Male 49.0
Sample D Male 28.6
Ventral pallidum
nTPM: 33.1
Samples: 4

Max nTPM: 44.1
Min nTPM: 27.1
Sample A Female 29.1
Sample B Female 32.1
Sample C Male 44.1
Sample D Male 27.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 14.9
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.9
Sample A Male 13.5
Sample B Male 12.9
Sample C Female 17.7
Sample D Female 15.6
Septum
nTPM: 10.3
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.6
Sample A Male 10.3
Sample B Male 9.6
Sample C Female 10.6
Sample D Female 10.6
Ventral forebrain
nTPM: 12.9
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.8
Sample A Male 13.5
Sample B Male 10.8
Sample C Female 13.4
Sample D Female 13.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
69080045 Antisense, RP_050324_01_F08, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 0.7
69080045 Antisense, RP_050324_01_F08, Mouse strain C57BL/6J (56 days, male) 0.7

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