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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Medium
Cells in molecular layer: Not detected
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:13.2 nTPM
HPA Brain:35.9 nTPM
GTEx:13.2 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Mouse:13.7 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010515
Purkinje cells Medium
Cells in granular layer Medium
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 16.2
2003 Female, age 85, right hemisphere 27.3
2055 Female, age 91, right hemisphere 18.3
1769 Male, age 76, right hemisphere 16.9
1788 Male, age 55, unknown 16.7
1774 Male, age 80, left hemisphere 16.5
1768 Female, age 72, unknown 13.7
2101 Male, age 74, right hemisphere 10.7
2006 Male, age 61, right hemisphere 9.3
Cerebellar nuclei
nTPM: 35.9
2005 Male, age 80, left hemisphere 53.0
2882 Male, age 76, left hemisphere 43.4
1966 Female, age 91, left hemisphere 42.5
2177 Female, age 85, both hemispheres 39.1
2175 Male, age 61, right hemisphere 34.3
2783 Female, age 72, unknown 31.9
1871 Male, age 74, unknown 31.3
1879 Male, age 55, unknown 25.4
2318 Male, age 74, left hemisphere 22.5
Flocculonodular lobe
nTPM: 17.6
2004 Male, age 61, right hemisphere 28.4
1765 Male, age 55, unknown 19.4
1835 Female, age 85, right hemisphere 18.7
1767 Male, age 76, left hemisphere 17.2
2176 Female, age 91, right hemisphere 14.0
1792 Male, age 74, unknown 13.0
1771 Male, age 80, left hemisphere 12.6
Vermis
nTPM: 14.2
1778 Female, age 91, left hemisphere 18.0
1766 Male, age 55, unknown 16.5
2834 Male, age 80, left hemisphere 16.0
1988 Female, age 85, left hemisphere 15.3
1928 Female, age 72, unknown 14.0
1825 Male, age 74, unknown 13.1
2460 Male, age 61, both hemispheres 12.6
1770 Male, age 76, left hemisphere 12.5
1751 Male, age 74, right hemisphere 10.2

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 10.8
Samples: 215

Max nTPM: 136.3
Min nTPM: 2.5
Std nTPM: 16.0
Median nTPM: 5.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 136.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 117.0
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 84.7
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 72.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 64.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 50.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 48.3
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 45.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 37.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 36.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 34.8
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 34.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 33.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 33.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 32.4
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 31.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 30.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 29.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 29.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 25.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 22.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 22.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 21.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 20.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 20.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 20.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 19.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 17.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 16.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 16.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 15.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 14.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 14.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 14.6
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 14.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 14.1
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 13.6
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 13.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 13.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 13.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 12.8
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 12.7
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 12.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 11.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 10.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 10.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 10.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 10.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 10.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 10.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 10.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 9.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 9.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 9.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 8.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 8.9
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 8.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 8.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 8.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 8.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 8.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 8.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 7.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 7.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 7.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 7.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 7.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 7.3
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 7.3
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 7.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 7.2
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 7.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 7.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 7.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 7.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 7.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 7.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 7.0
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 7.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 7.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 6.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 6.9
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 6.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 6.5
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 6.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 6.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 6.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 6.3
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 6.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 6.2
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 6.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 6.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 6.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 6.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 6.0
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 6.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 5.9
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 5.9
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 5.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 5.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 5.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 5.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 5.7
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 5.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 5.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 5.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 5.6
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 5.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 5.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 5.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 5.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 5.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 5.4
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 5.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 5.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 5.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 5.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 5.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 5.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 5.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 5.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 5.2
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 5.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 5.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 5.2
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 5.2
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 5.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 5.1
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 5.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 5.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 5.1
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 5.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 4.9
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 4.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 4.9
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 4.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 4.9
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 4.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 4.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 4.8
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 4.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 4.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 4.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 4.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 4.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 4.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 4.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 4.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 4.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 4.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 4.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 4.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 4.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 4.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 4.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 4.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 4.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 4.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 4.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 4.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 4.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 4.3
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 4.3
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 4.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 4.3
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 4.3
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 4.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 4.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 4.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 4.2
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 4.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 4.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 4.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 4.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 4.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 4.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 4.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 4.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 3.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 3.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 3.9
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 3.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 3.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 3.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 3.8
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 3.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 3.8
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 3.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 3.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 3.7
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 3.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 3.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 3.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 3.6
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 3.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 3.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 3.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 3.5
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 3.5
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 3.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 3.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 3.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 3.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 3.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 3.2
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 3.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 3.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 3.1
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 3.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 3.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 2.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 2.8
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 2.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 2.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 2.5
Show allShow less
Brain - Cerebellum
Average nTPM: 13.2
Samples: 241

Max nTPM: 135.4
Min nTPM: 3.0
Std nTPM: 19.7
Median nTPM: 6.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 135.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 118.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 112.6
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 106.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 86.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 84.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 80.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 74.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 63.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 59.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 55.2
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 53.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 53.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 52.9
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 50.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 49.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 42.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 41.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 40.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 36.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 34.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 30.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 30.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 29.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 27.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 25.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 25.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 25.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 25.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 25.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 25.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 23.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 23.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 23.0
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 20.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 20.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 20.1
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 19.4
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 19.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 17.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 17.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 16.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 15.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 15.0
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 14.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 14.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 14.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 14.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 12.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 12.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 11.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 11.8
GTEX-15G19-2826-SM-6M48K 60-69 years, male 11.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 11.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 11.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 11.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 11.0
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 10.9
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 10.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 10.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 10.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 10.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 10.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 10.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 10.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 10.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 9.8
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 9.7
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 9.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 9.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 9.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 9.1
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 9.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 8.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 8.6
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 8.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 8.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 8.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 8.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 8.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 8.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 8.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 8.0
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 8.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 7.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 7.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 7.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 7.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 7.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 7.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 7.3
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 7.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 7.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 7.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 7.2
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 7.1
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 7.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 7.1
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 6.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 6.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 6.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 6.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 6.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 6.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 6.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 6.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 6.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 6.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 6.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 6.6
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 6.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 6.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 6.4
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 6.4
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 6.3
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 6.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 6.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 6.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 6.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 6.2
GTEX-14PN4-3026-SM-664O4 50-59 years, male 6.2
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 6.2
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 6.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 6.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 6.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 5.9
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 5.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 5.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 5.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 5.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 5.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 5.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 5.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 5.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 5.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 5.7
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 5.6
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 5.6
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 5.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 5.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 5.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 5.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 5.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 5.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 5.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 5.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 5.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 5.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 5.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 5.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 5.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 5.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 5.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 5.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 5.2
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 5.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 5.2
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 5.2
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 5.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 5.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 5.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 5.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 5.0
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 5.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 5.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 4.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 4.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 4.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 4.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 4.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 4.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 4.8
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 4.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 4.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 4.7
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 4.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 4.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 4.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 4.7
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 4.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 4.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 4.6
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 4.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 4.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 4.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 4.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 4.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 4.4
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 4.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 4.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 4.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 4.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 4.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 4.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 4.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 4.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 4.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 4.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 4.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 4.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 4.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 4.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 4.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 4.1
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 4.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 4.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 4.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 4.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 4.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 4.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 4.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 4.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 4.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 4.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 4.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 4.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 3.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 3.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 3.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 3.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 3.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 3.8
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 3.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 3.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 3.8
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 3.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 3.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 3.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 3.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 3.7
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 3.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 3.6
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 3.5
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 3.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 3.4
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 3.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 3.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 3.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 3.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 3.1
GTEX-14E6D-2926-SM-664OP 50-59 years, male 3.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 34.9
FF:10166-103B4 76 years, female 49.0
FF:10083-102B2 22-68 years, mixed 20.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 13.8
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 14.7
Sample C Female 13.7
Sample D Female 14.3

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