PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:44.5 nTPM
FANTOM5:246.6 Scaled Tags Per Million
Mouse:10.0 nTPM

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 44.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 22.9
1984 Male, age 76, both hemispheres 28.6
2301 Female, age 85, both hemispheres 24.7
2188 Female, age 91, both hemispheres 19.9
2090 Male, age 80, both hemispheres 18.3
Area postrema
nTPM: 44.5
2799 Male, age 61, both hemispheres 70.0
2054 Male, age 76, both hemispheres 39.7
2306 Male, age 80, both hemispheres 23.7
Dorsal cochlear nucleus
nTPM: 26.8
2058 Male, age 76, both hemispheres 35.8
2802 Male, age 74, right hemisphere 30.8
2187 Female, age 91, both hemispheres 28.4
2378 Male, age 80, both hemispheres 20.5
2370 Male, age 61, both hemispheres 18.8
Dorsal medullary reticular nucleus
nTPM: 17.5
2040 Female, age 85, both hemispheres 18.0
2373 Male, age 61, both hemispheres 17.8
2088 Male, age 76, both hemispheres 16.6
Dorsal motor vagal complex
nTPM: 18.6
2185 Male, age 76, both hemispheres 26.2
2797 Male, age 61, both hemispheres 23.8
2643 Male, age 74, both hemispheres 20.3
2133 Female, age 91, both hemispheres 17.0
2813 Female, age 72, unknown 16.6
2807 Female, age 85, both hemispheres 15.3
2844 Male, age 55, unknown 14.9
2000 Male, age 74, unknown 14.5
Dorsal tegmental nucleus
nTPM: 27.7
2083 Male, age 80, both hemispheres 29.0
2326 Male, age 74, both hemispheres 28.7
1936 Male, age 76, left hemisphere 26.8
2358 Male, age 61, both hemispheres 26.3
Dorsolateral tegmental area
nTPM: 25.3
2360 Male, age 74, both hemispheres 28.9
2141 Male, age 76, both hemispheres 27.1
2654 Male, age 80, both hemispheres 26.6
2751 Female, age 85, both hemispheres 23.9
2337 Male, age 61, both hemispheres 20.0
Gigantocellular reticular nuclei, medullary
nTPM: 21.2
2022 Male, age 76, right hemisphere 29.2
1876 Female, age 85, both hemispheres 23.7
2314 Male, age 61, both hemispheres 21.9
2387 Female, age 91, both hemispheres 18.7
2462 Male, age 74, both hemispheres 17.7
2310 Male, age 80, both hemispheres 16.0
Gigantocellular reticular nuclei, pars
nTPM: 17.0
2084 Female, age 85, both hemispheres 22.9
2706 Male, age 80, both hemispheres 17.4
2330 Male, age 80, both hemispheres 16.9
2336 Male, age 61, both hemispheres 15.9
2168 Male, age 76, both hemispheres 12.0
Inferior olive
nTPM: 26.1
2563 Male, age 74, both hemispheres 36.7
2379 Male, age 80, both hemispheres 27.1
2628 Female, age 91, both hemispheres 25.3
2085 Female, age 85, both hemispheres 21.6
2178 Male, age 61, both hemispheres 19.8
Kolliker-Fuse nucleus
nTPM: 33.4
2315 Male, age 76, right hemisphere 54.8
2163 Male, age 80, both hemispheres 26.9
2793 Female, age 91, left hemisphere 18.6
Lateral lemniscal nuclei
nTPM: 17.7
2036 Male, age 80, both hemispheres 24.6
2746 Female, age 85, left hemisphere 18.9
2169 Male, age 76, both hemispheres 16.7
2453 Male, age 74, right hemisphere 16.1
2320 Female, age 91, left hemisphere 12.0
Lateral medullary reticular nucleus
nTPM: 24.4
2044 Male, age 76, both hemispheres 35.6
2804 Female, age 91, both hemispheres 29.4
2374 Male, age 61, both hemispheres 21.4
2190 Female, age 85, both hemispheres 20.7
2305 Male, age 74, both hemispheres 20.0
2852 Male, age 80, both hemispheres 19.1
Lateral parabrachial nucleus
nTPM: 26.0
2792 Male, age 76, both hemispheres 36.0
2139 Female, age 85, right hemisphere 30.3
2013 Male, age 80, both hemispheres 20.8
2790 Male, age 61, both hemispheres 16.9
Lateral vestibular nucleus
nTPM: 26.8
2184 Male, age 76, both hemispheres 31.3
2311 Male, age 80, both hemispheres 22.3
Locus coeruleus
nTPM: 19.4
2123 Female, age 91, both hemispheres 27.4
1980 Male, age 76, both hemispheres 20.7
2317 Female, age 72, unknown 20.5
2788 Male, age 74, unknown 18.0
2014 Male, age 55, unknown 17.6
2162 Male, age 80, both hemispheres 17.2
2720 Male, age 74, both hemispheres 14.5
Medial olivary nucleus
nTPM: 31.7
2138 Female, age 91, both hemispheres 37.6
1962 Male, age 76, both hemispheres 33.6
1943 Male, age 61, both hemispheres 33.2
2851 Male, age 80, both hemispheres 22.6
Medial parabrachial nucleus
nTPM: 27.0
2170 Female, age 91, both hemispheres 33.6
2786 Male, age 76, both hemispheres 30.0
2854 Male, age 80, both hemispheres 24.3
2156 Male, age 61, both hemispheres 24.0
2463 Female, age 85, right hemisphere 22.9
Medial periolivary nuclei
nTPM: 19.5
2791 Male, age 74, right hemisphere 22.6
2081 Male, age 80, both hemispheres 21.6
2458 Female, age 91, both hemispheres 19.5
2171 Female, age 85, both hemispheres 18.4
2063 Male, age 76, both hemispheres 15.7
Medial vestibular nucleus
nTPM: 22.2
2801 Male, age 74, both hemispheres 23.6
2134 Male, age 76, both hemispheres 23.3
2743 Female, age 85, both hemispheres 21.9
2624 Male, age 61, both hemispheres 21.8
2803 Female, age 91, both hemispheres 21.7
2093 Male, age 80, both hemispheres 21.1
Motor facial nucleus
nTPM: 18.7
2795 Female, age 91, both hemispheres 23.7
2365 Male, age 74, right hemisphere 20.5
2126 Male, age 61, both hemispheres 18.2
2062 Male, age 76, both hemispheres 17.8
2327 Male, age 80, both hemispheres 16.2
2697 Female, age 85, both hemispheres 15.4
Motor hypoglossal nucleus
nTPM: 19.4
2277 Male, age 76, both hemispheres 24.9
2461 Male, age 61, both hemispheres 22.7
2125 Female, age 91, both hemispheres 21.6
2182 Male, age 80, both hemispheres 14.0
2132 Female, age 85, both hemispheres 13.7
Motor trigeminal nucleus
nTPM: 19.3
2309 Male, age 76, both hemispheres 23.0
2079 Male, age 80, both hemispheres 19.8
2335 Male, age 61, both hemispheres 19.5
2321 Female, age 91, both hemispheres 17.9
2560 Male, age 74, both hemispheres 16.5
Nuclei of the trapezoid body
nTPM: 20.3
1983 Male, age 76, both hemispheres 22.1
2368 Female, age 91, both hemispheres 21.8
2735 Female, age 85, both hemispheres 21.1
2159 Male, age 61, both hemispheres 18.3
2166 Male, age 80, both hemispheres 18.2
Nucleus ambiguus
nTPM: 32.1
2071 Male, age 76, both hemispheres 44.7
2096 Female, age 85, both hemispheres 19.6
Nucleus cuneatus
nTPM: 21.9
2100 Male, age 76, both hemispheres 28.2
2564 Male, age 74, both hemispheres 26.1
2376 Male, age 61, both hemispheres 24.7
2562 Male, age 61, both hemispheres 23.5
2380 Male, age 80, both hemispheres 22.8
2808 Female, age 85, both hemispheres 22.5
2805 Female, age 91, both hemispheres 21.6
2131 Male, age 76, both hemispheres 15.5
2381 Male, age 80, both hemispheres 12.4
Nucleus gracilis
nTPM: 20.4
2627 Male, age 74, both hemispheres 25.2
2299 Female, age 85, both hemispheres 22.8
2382 Male, age 80, both hemispheres 13.3
Nucleus raphe magnus
nTPM: 15.5
2455 Male, age 74, both hemispheres 18.3
2328 Male, age 80, both hemispheres 18.0
2459 Female, age 91, both hemispheres 16.1
2160 Male, age 61, both hemispheres 15.1
2172 Female, age 85, both hemispheres 15.1
2051 Male, age 76, both hemispheres 10.4
Nucleus raphe obscurus
nTPM: 32.6
2142 Male, age 76, midline 53.9
2800 Male, age 61, midline 28.1
2845 Female, age 85, midline 15.8
Nucleus raphe pallidus
nTPM: 31.2
1924 Male, age 61, midline 50.7
2145 Male, age 76, midline 22.9
2183 Male, age 80, midline 20.2
Nucleus tractus solitarii
nTPM: 18.1
2144 Female, age 91, right hemisphere 24.5
2656 Male, age 76, both hemispheres 17.3
2191 Female, age 85, both hemispheres 16.0
2307 Male, age 80, both hemispheres 14.6
Paramedian reticular nucleus
nTPM: 20.8
2052 Male, age 76, both hemispheres 27.9
2057 Male, age 80, both hemispheres 19.4
2050 Female, age 85, both hemispheres 18.9
2313 Male, age 61, both hemispheres 16.8
Parvicellular reticular nuclei
nTPM: 20.9
2119 Male, age 80, both hemispheres 24.7
2095 Male, age 76, both hemispheres 22.5
2558 Male, age 74, both hemispheres 15.7
Parvicellular reticular nuclei, medullary
nTPM: 20.6
2091 Female, age 85, both hemispheres 23.5
2189 Female, age 91, both hemispheres 23.1
2181 Male, age 80, left hemisphere 15.2
Pedunculopontine tegmental nucleus
nTPM: 22.4
2334 Male, age 80, both hemispheres 24.2
1921 Female, age 85, both hemispheres 22.3
2338 Male, age 61, both hemispheres 20.7
Peritrigeminal nucleus
nTPM: 34.2
2136 Male, age 76, both hemispheres 38.6
2179 Male, age 61, both hemispheres 32.3
2067 Female, age 85, both hemispheres 31.7
Pontine nuclei
nTPM: 16.0
1863 Male, age 55, unknown 21.7
2115 Male, age 80, left hemisphere 19.4
2109 Female, age 72, unknown 17.1
2727 Male, age 61, right hemisphere 15.5
2319 Female, age 91, both hemispheres 14.8
2454 Male, age 74, left hemisphere 13.8
2787 Female, age 85, both hemispheres 13.6
1968 Male, age 76, left hemisphere 11.9
Pontine raphe nucleus
nTPM: 20.0
2853 Male, age 76, midline 22.7
2122 Female, age 85, midline 17.4
Posteroventral cochlear nucleus
nTPM: 23.0
2135 Female, age 91, both hemispheres 27.6
2752 Female, age 85, both hemispheres 26.3
2341 Male, age 80, both hemispheres 25.1
2371 Male, age 61, both hemispheres 20.1
2070 Male, age 76, both hemispheres 16.1
Prepositus hypoglossal nucleus
nTPM: 22.9
2086 Male, age 80, both hemispheres 27.7
2855 Female, age 85, right hemisphere 18.0
Principal sensory trigeminal nucleus
nTPM: 20.8
2324 Male, age 76, both hemispheres 34.6
2008 Male, age 80, left hemisphere 21.0
2367 Female, age 91, left hemisphere 14.5
2158 Male, age 61, both hemispheres 13.3
Reticular pontine nucleus, caudal
nTPM: 17.6
2332 Male, age 80, right hemisphere 18.6
2559 Male, age 74, both hemispheres 18.2
2092 Male, age 76, both hemispheres 17.6
2457 Female, age 91, both hemispheres 16.0
Reticular pontine nucleus, oral
nTPM: 20.0
1939 Male, age 80, both hemispheres 26.5
2167 Male, age 76, both hemispheres 24.2
2012 Female, age 85, both hemispheres 21.2
2366 Female, age 91, both hemispheres 15.4
2361 Male, age 74, both hemispheres 13.0
Reticulotegmental nucleus
nTPM: 25.3
2333 Male, age 80, both hemispheres 29.8
2325 Male, age 76, both hemispheres 26.1
2322 Female, age 91, both hemispheres 24.5
2452 Male, age 74, both hemispheres 20.6
Spinal trigeminal nucleus, caudal
nTPM: 18.8
2447 Male, age 76, both hemispheres 22.4
2390 Female, age 91, both hemispheres 19.8
2642 Male, age 74, both hemispheres 18.5
2308 Male, age 80, both hemispheres 17.5
2312 Male, age 61, both hemispheres 15.8
Spinal trigeminal nucleus, interpolar
nTPM: 21.7
2066 Male, age 76, right hemisphere 31.5
2625 Male, age 61, both hemispheres 21.1
2033 Male, age 80, both hemispheres 20.7
2386 Female, age 85, both hemispheres 19.1
2389 Female, age 91, both hemispheres 16.2
Spinal trigeminal nucleus, oral
nTPM: 19.3
2737 Female, age 85, both hemispheres 26.2
1978 Male, age 76, both hemispheres 16.6
2164 Male, age 80, both hemispheres 15.2
Spinal vestibular nucleus
nTPM: 20.0
2384 Male, age 74, both hemispheres 23.3
2796 Male, age 61, both hemispheres 21.6
2806 Female, age 85, both hemispheres 20.9
2748 Male, age 76, both hemispheres 19.6
2186 Female, age 91, both hemispheres 17.8
2780 Male, age 80, both hemispheres 16.9
Subcoeruleus area
nTPM: 21.7
2369 Female, age 85, left hemisphere 24.3
2323 Female, age 91, left hemisphere 23.7
1958 Male, age 80, both hemispheres 22.4
2451 Male, age 74, both hemispheres 21.9
2089 Male, age 76, left hemisphere 16.2
Superior olive
nTPM: 17.8
2364 Male, age 74, right hemisphere 22.2
1875 Female, age 85, both hemispheres 18.3
2329 Male, age 80, right hemisphere 16.7
2561 Female, age 91, both hemispheres 15.9
2020 Male, age 76, both hemispheres 15.8
Superior vestibular nucleus
nTPM: 35.4
2061 Male, age 76, both hemispheres 49.3
2383 Male, age 74, both hemispheres 33.1
2015 Male, age 80, both hemispheres 24.0
Ventral medullary reticular nucleus
nTPM: 17.5
2060 Male, age 76, both hemispheres 19.3
2372 Male, age 61, both hemispheres 15.6
Ventral periolivary nuclei
nTPM: 19.1
2130 Female, age 85, both hemispheres 25.5
2165 Male, age 80, both hemispheres 19.1
2023 Male, age 76, both hemispheres 16.9
2794 Female, age 91, left hemisphere 15.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 24.0
1986 Male, age 76, both hemispheres 38.6
2302 Female, age 91, both hemispheres 28.1
2180 Male, age 61, both hemispheres 20.1
2741 Female, age 85, both hemispheres 19.8
2118 Male, age 80, both hemispheres 13.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 18.3
2359 Male, age 61, both hemispheres 23.8
2840 Female, age 85, both hemispheres 19.6
2161 Male, age 80, both hemispheres 17.3
2449 Male, age 74, both hemispheres 16.4
2456 Female, age 91, both hemispheres 16.3
1959 Male, age 76, both hemispheres 16.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 246.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 246.6
FF:10165-103B3 76 years, female 266.5
FF:10182-103D2 60 years, female 226.6
Medulla oblongata
Scaled Tags Per Million: 146.2
FF:10174-103C3 60 years, female 231.3
FF:10155-103A2 76 years, female 120.3
FF:10038-101F2 18-64 years, mixed 86.9
Pons
Scaled Tags Per Million: 35.8
FF:10033-101E6 18-54 years, mixed 35.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 10.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 10.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.9
Sample A Male 9.3
Sample B Male 8.9
Sample C Female 10.9
Sample D Female 11.1

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