HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.9 nTPM
HPA Brain:25.7 nTPM
GTEx:7.9 nTPM
FANTOM5:10.5 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:13.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1911 Female, age 85, right hemisphere 26.8
2529 Female, age 94, left hemisphere 25.7
1855 Male, age 76, left hemisphere 20.4
1898 Male, age 80, left hemisphere 19.1
2148 Female, age 91, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.9
Dentate gyrus
nTPM: 20.8
2530 Female, age 94, left hemisphere 29.6
2528 Male, age 74, both hemispheres 24.5
2010 Male, age 76, both hemispheres 23.8
2531 Female, age 67, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.0
1927 Female, age 91, both hemispheres 14.5
Entorhinal gyrus
nTPM: 19.5
2117 Female, age 91, right hemisphere 28.6
2764 Male, age 80, right hemisphere 22.3
2686 Male, age 75, right hemisphere 18.1
1938 Female, age 85, left hemisphere 16.6
2613 Female, age 94, left hemisphere 15.9
1787 Male, age 76, left hemisphere 15.3
Hippocampus, CA1
nTPM: 17.3
2082 Female, age 91, right hemisphere 23.3
1873 Female, age 85, both hemispheres 19.4
2527 Male, age 74, both hemispheres 18.8
2045 Male, age 76, both hemispheres 12.7
2749 Male, age 80, left hemisphere 12.1
Hippocampus, CA2
nTPM: 23.6
1963 Male, age 80, left hemisphere 28.8
2249 Male, age 74, both hemispheres 25.3
2437 Female, age 94, left hemisphere 24.5
2113 Female, age 91, right hemisphere 24.2
1940 Female, age 85, left hemisphere 20.0
1892 Male, age 76, both hemispheres 18.6
Hippocampus, CA3
nTPM: 18.0
1891 Female, age 85, both hemispheres 29.7
1867 Male, age 76, both hemispheres 26.7
2436 Male, age 74, both hemispheres 14.1
2137 Male, age 80, left hemisphere 13.8
2620 Female, age 94, left hemisphere 12.3
2861 Female, age 67, both hemispheres 11.2
Parahippocampal cortex
nTPM: 15.8
2532 Female, age 72, left hemisphere 23.7
2692 Male, age 74, both hemispheres 21.6
1990 Female, age 91, right hemisphere 21.1
2018 Male, age 76, both hemispheres 20.7
2245 Female, age 91, both hemispheres 14.6
1850 Male, age 80, both hemispheres 13.6
2693 Female, age 94, both hemispheres 12.0
1933 Female, age 85, both hemispheres 11.4
2622 Female, age 67, right hemisphere 10.2
2250 Female, age 67, right hemisphere 9.2
Perirhinal gyrus
nTPM: 9.5
2521 Female, age 94, right hemisphere 11.5
2848 Male, age 76, right hemisphere 10.9
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 8.3
1841 Female, age 85, right hemisphere 6.1
Subiculum
nTPM: 25.7
2042 Male, age 76, both hemispheres 34.6
1901 Male, age 80, both hemispheres 30.1
2438 Female, age 94, left hemisphere 24.9
1977 Female, age 85, both hemispheres 21.6
2729 Female, age 91, right hemisphere 21.6
2619 Male, age 74, both hemispheres 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.9
Samples: 197

Max nTPM: 23.6
Min nTPM: 1.0
Std nTPM: 4.0
Median nTPM: 7.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 19.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 17.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 16.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 16.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 16.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 16.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 15.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.5
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.0
Pig sample Sample description nTPM
Subiculum
nTPM: 7.3
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.4
Sample A Female 7.3
Sample B Female 8.4
Sample C Male 6.4
Sample D Male 7.2
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 5.7
Sample A Female 20.2
Sample B Female 10.9
Sample C Male 19.2
Sample D Male 5.7
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.4
Sample A Female 7.1
Sample B Female 9.7
Sample C Male 5.4
Sample D Male 5.7
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.1
Sample A Female 12.8
Sample B Female 7.1
Sample C Male 11.4
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 9.5
Min nTPM: 3.6
Sample A Male 9.5
Sample B Male 8.4
Sample C Female 6.7
Sample D Female 3.6
Hippocampal formation
nTPM: 13.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.3
Sample A Male 11.3
Sample B Male 12.8
Sample C Female 16.9
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68797510 Antisense, RP_050210_02_D04, Mouse strain C57BL/6J (56 days, male) 0.1

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