HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:39.5 nTPM
GTEx:11.7 nTPM
FANTOM5:35.8 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:28.9 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023580
Glial cells Low
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.5
Sample id Sample description nTPM
Hippocampus
nTPM: 36.4
2529 Female, age 94, left hemisphere 46.0
1911 Female, age 85, right hemisphere 40.8
2621 Female, age 67, right hemisphere 36.1
1855 Male, age 76, left hemisphere 32.8
1898 Male, age 80, left hemisphere 32.2
2148 Female, age 91, left hemisphere 30.4
Dentate gyrus
nTPM: 35.8
2530 Female, age 94, left hemisphere 42.1
2010 Male, age 76, both hemispheres 41.5
2531 Female, age 67, both hemispheres 38.6
2246 Female, age 85, both hemispheres 33.4
2528 Male, age 74, both hemispheres 30.2
1927 Female, age 91, both hemispheres 29.2
Entorhinal gyrus
nTPM: 39.5
2686 Male, age 75, right hemisphere 46.3
2117 Female, age 91, right hemisphere 42.0
1938 Female, age 85, left hemisphere 40.1
2764 Male, age 80, right hemisphere 37.6
2613 Female, age 94, left hemisphere 36.9
1787 Male, age 76, left hemisphere 34.4
Hippocampus, CA1
nTPM: 33.5
2749 Male, age 80, left hemisphere 37.5
2045 Male, age 76, both hemispheres 36.7
2527 Male, age 74, both hemispheres 36.0
2082 Female, age 91, right hemisphere 29.8
1873 Female, age 85, both hemispheres 27.7
Hippocampus, CA2
nTPM: 35.1
1963 Male, age 80, left hemisphere 40.5
2437 Female, age 94, left hemisphere 37.7
1940 Female, age 85, left hemisphere 37.1
2113 Female, age 91, right hemisphere 35.5
1892 Male, age 76, both hemispheres 30.0
2249 Male, age 74, both hemispheres 29.6
Hippocampus, CA3
nTPM: 35.6
2137 Male, age 80, left hemisphere 42.3
2861 Female, age 67, both hemispheres 40.4
1867 Male, age 76, both hemispheres 37.5
1891 Female, age 85, both hemispheres 36.1
2436 Male, age 74, both hemispheres 30.0
2620 Female, age 94, left hemisphere 27.4
Parahippocampal cortex
nTPM: 37.9
2018 Male, age 76, both hemispheres 48.9
2622 Female, age 67, right hemisphere 46.1
2245 Female, age 91, both hemispheres 39.4
2692 Male, age 74, both hemispheres 39.4
1933 Female, age 85, both hemispheres 37.8
2532 Female, age 72, left hemisphere 37.1
2250 Female, age 67, right hemisphere 35.7
2693 Female, age 94, both hemispheres 32.8
1990 Female, age 91, right hemisphere 30.9
1850 Male, age 80, both hemispheres 30.8
Perirhinal gyrus
nTPM: 31.4
1841 Female, age 85, right hemisphere 34.5
2848 Male, age 76, right hemisphere 33.1
2521 Female, age 94, right hemisphere 30.3
1794 Male, age 80, right hemisphere 30.1
1847 Female, age 91, left hemisphere 29.2
Subiculum
nTPM: 39.3
2438 Female, age 94, left hemisphere 51.0
2042 Male, age 76, both hemispheres 42.2
1977 Female, age 85, both hemispheres 40.8
2729 Female, age 91, right hemisphere 35.1
2619 Male, age 74, both hemispheres 33.4
1901 Male, age 80, both hemispheres 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 25.8
Min nTPM: 5.4
Std nTPM: 3.9
Median nTPM: 10.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 25.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 22.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 21.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 21.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 20.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 19.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.6
Pig sample Sample description nTPM
Subiculum
nTPM: 32.9
Samples: 4

Max nTPM: 40.1
Min nTPM: 28.9
Sample A Female 40.1
Sample B Female 31.3
Sample C Male 31.2
Sample D Male 28.9
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 39.1
Min nTPM: 29.0
Sample A Female 36.4
Sample B Female 30.0
Sample C Male 39.1
Sample D Male 29.0
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 30.8
Sample A Female 32.0
Sample B Female 31.7
Sample C Male 31.9
Sample D Male 30.8
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 37.5
Min nTPM: 30.7
Sample A Female 30.9
Sample B Female 30.7
Sample C Male 37.5
Sample D Male 33.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.9
Sample A Male 28.8
Sample B Male 23.9
Sample C Female 31.0
Sample D Female 32.0
Hippocampal formation
nTPM: 27.6
Samples: 4

Max nTPM: 31.9
Min nTPM: 23.6
Sample A Male 25.9
Sample B Male 31.9
Sample C Female 23.6
Sample D Female 28.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71307190 Antisense, RP_050825_01_D08, Mouse strain C57BL/6J (56 days, male) 1.1

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