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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:344.5 nTPM
FANTOM5:128.9 Scaled Tags Per Million
Pig:56.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010088Antibody CAB026356
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

344.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 344.5
Samples: 246

Max nTPM: 1155.5
Min nTPM: 131.6
Std nTPM: 125.7
Median nTPM: 323.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1155.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 674.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 662.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 659.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 646.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 643.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 629.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 623.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 616.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 591.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 571.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 555.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 549.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 548.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 532.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 529.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 527.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 527.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 524.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 515.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 510.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 506.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 505.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 505.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 500.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 497.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 497.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 494.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 489.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 484.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 478.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 476.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 475.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 472.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 470.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 467.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 466.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 465.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 463.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 463.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 462.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 456.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 455.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 453.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 452.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 452.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 449.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 448.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 445.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 442.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 439.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 434.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 434.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 432.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 432.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 432.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 426.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 425.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 424.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 424.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 423.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 421.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 421.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 420.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 414.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 414.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 414.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 411.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 411.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 410.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 408.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 404.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 401.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 401.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 401.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 399.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 398.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 397.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 394.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 392.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 391.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 386.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 385.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 380.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 379.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 376.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 375.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 374.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 369.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 366.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 366.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 366.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 366.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 364.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 359.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 359.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 359.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 353.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 352.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 351.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 349.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 346.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 345.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 345.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 345.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 344.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 344.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 342.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 341.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 341.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 339.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 339.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 339.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 337.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 336.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 333.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 333.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 331.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 329.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 325.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 324.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 324.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 324.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 323.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 322.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 320.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 319.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 318.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 316.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 316.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 313.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 312.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 311.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 311.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 309.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 308.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 307.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 303.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 302.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 301.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 301.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 298.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 296.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 295.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 294.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 294.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 294.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 291.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 291.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 290.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 289.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 289.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 288.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 287.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 286.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 284.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 284.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 284.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 281.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 280.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 279.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 279.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 279.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 277.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 277.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 277.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 276.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 274.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 273.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 272.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 272.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 272.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 271.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 269.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 269.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 269.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 266.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 265.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 265.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 264.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 263.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 261.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 261.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 257.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 249.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 247.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 246.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 245.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 245.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 245.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 245.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 244.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 241.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 240.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 239.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 238.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 238.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 234.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 233.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 233.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 232.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 230.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 230.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 228.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 227.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 225.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 224.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 224.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 223.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 222.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 221.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 221.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 217.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 216.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 214.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 214.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 213.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 212.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 212.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 211.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 201.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 201.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 201.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 200.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 200.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 199.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 198.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 198.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 197.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 196.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 195.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 189.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 188.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 187.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 180.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 177.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 175.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 174.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 172.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 171.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 148.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 143.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 142.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 131.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

128.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 128.9
FF:10164-103B2 76 years, female 128.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.6
Pig sample Sample description nTPM
Caudate
nTPM: 56.6
Samples: 4

Max nTPM: 61.6
Min nTPM: 47.7
Sample A Female 55.5
Sample B Female 61.4
Sample C Male 61.6
Sample D Male 47.7

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