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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:522.4 nTPM
GTEx:522.4 nTPM
FANTOM5:418.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010088Antibody CAB026356
Squamous epithelial cells Not detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

522.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 522.4
Samples: 156

Max nTPM: 1022.9
Min nTPM: 202.6
Std nTPM: 177.0
Median nTPM: 505.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1022.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1017.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 973.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 929.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 921.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 919.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 870.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 852.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 843.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 834.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 819.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 789.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 764.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 757.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 753.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 750.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 745.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 742.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 721.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 712.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 711.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 705.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 704.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 688.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 686.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 686.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 685.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 684.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 683.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 679.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 675.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 674.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 674.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 663.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 657.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 655.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 655.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 653.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 653.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 649.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 646.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 632.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 625.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 622.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 619.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 611.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 610.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 608.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 607.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 605.1
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 595.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 593.4
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 590.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 589.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 587.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 580.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 578.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 576.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 574.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 571.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 569.1
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 566.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 563.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 558.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 555.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 555.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 551.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 547.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 546.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 538.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 533.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 532.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 524.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 524.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 521.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 513.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 506.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 505.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 504.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 501.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 498.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 494.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 492.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 490.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 487.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 486.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 481.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 480.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 478.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 478.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 477.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 473.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 463.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 461.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 450.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 450.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 450.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 449.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 449.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 441.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 438.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 436.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 435.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 432.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 424.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 424.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 417.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 411.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 408.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 406.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 404.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 400.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 381.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 381.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 380.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 377.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 375.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 374.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 373.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 368.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 368.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 357.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 343.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 341.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 341.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 334.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 334.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 333.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 327.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 326.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 325.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 324.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 323.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 322.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 317.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 316.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 315.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 312.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 312.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 309.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 309.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 309.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 305.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 303.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 301.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 287.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 283.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 278.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 273.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 268.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 265.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 263.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 262.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 254.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 234.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 202.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

418.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 418.1
FF:10204-103F6 68 years, female 418.1

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