HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:7.2 nTPM
HPA Brain:25.1 nTPM
GTEx:7.2 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:25.5 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006428
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
2621 Female, age 67, right hemisphere 24.6
2148 Female, age 91, left hemisphere 23.5
1855 Male, age 76, left hemisphere 22.8
1898 Male, age 80, left hemisphere 22.4
1911 Female, age 85, right hemisphere 22.1
2529 Female, age 94, left hemisphere 20.0
Dentate gyrus
nTPM: 23.1
2010 Male, age 76, both hemispheres 28.1
1927 Female, age 91, both hemispheres 24.3
2246 Female, age 85, both hemispheres 22.8
2531 Female, age 67, both hemispheres 22.6
2530 Female, age 94, left hemisphere 21.1
2528 Male, age 74, both hemispheres 19.7
Entorhinal gyrus
nTPM: 22.0
1938 Female, age 85, left hemisphere 26.6
1787 Male, age 76, left hemisphere 23.0
2117 Female, age 91, right hemisphere 22.5
2613 Female, age 94, left hemisphere 21.2
2686 Male, age 75, right hemisphere 19.9
2764 Male, age 80, right hemisphere 18.8
Hippocampus, CA1
nTPM: 22.8
2045 Male, age 76, both hemispheres 26.8
1873 Female, age 85, both hemispheres 25.7
2082 Female, age 91, right hemisphere 21.0
2749 Male, age 80, left hemisphere 21.0
2527 Male, age 74, both hemispheres 19.2
Hippocampus, CA2
nTPM: 22.4
1892 Male, age 76, both hemispheres 26.0
1940 Female, age 85, left hemisphere 25.4
1963 Male, age 80, left hemisphere 21.6
2249 Male, age 74, both hemispheres 21.1
2113 Female, age 91, right hemisphere 20.9
2437 Female, age 94, left hemisphere 19.4
Hippocampus, CA3
nTPM: 22.7
1867 Male, age 76, both hemispheres 25.9
1891 Female, age 85, both hemispheres 24.2
2137 Male, age 80, left hemisphere 22.7
2620 Female, age 94, left hemisphere 21.8
2436 Male, age 74, both hemispheres 21.3
2861 Female, age 67, both hemispheres 20.3
Parahippocampal cortex
nTPM: 24.1
2693 Female, age 94, both hemispheres 28.6
1850 Male, age 80, both hemispheres 25.8
2532 Female, age 72, left hemisphere 25.5
2018 Male, age 76, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.6
2245 Female, age 91, both hemispheres 23.8
2250 Female, age 67, right hemisphere 23.5
1933 Female, age 85, both hemispheres 23.3
2692 Male, age 74, both hemispheres 21.3
2622 Female, age 67, right hemisphere 20.1
Perirhinal gyrus
nTPM: 25.1
1841 Female, age 85, right hemisphere 27.2
2848 Male, age 76, right hemisphere 26.4
2521 Female, age 94, right hemisphere 24.7
1847 Female, age 91, left hemisphere 24.6
1794 Male, age 80, right hemisphere 22.8
Subiculum
nTPM: 22.2
1901 Male, age 80, both hemispheres 24.0
2729 Female, age 91, right hemisphere 23.8
1977 Female, age 85, both hemispheres 22.4
2438 Female, age 94, left hemisphere 22.4
2042 Male, age 76, both hemispheres 21.2
2619 Male, age 74, both hemispheres 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.2
Samples: 197

Max nTPM: 21.1
Min nTPM: 3.6
Std nTPM: 1.9
Median nTPM: 6.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 13.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 13.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 13.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 11.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 11.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 10.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 10.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.9
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.7
Pig sample Sample description nTPM
Subiculum
nTPM: 42.9
Samples: 4

Max nTPM: 46.8
Min nTPM: 40.6
Sample A Female 43.6
Sample B Female 40.7
Sample C Male 40.6
Sample D Male 46.8
Dorsal hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 52.3
Min nTPM: 40.6
Sample A Female 52.3
Sample B Female 46.9
Sample C Male 40.6
Sample D Male 47.2
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 50.2
Min nTPM: 43.3
Sample A Female 46.6
Sample B Female 50.2
Sample C Male 43.3
Sample D Male 46.9
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 48.6
Min nTPM: 29.9
Sample A Female 48.6
Sample B Female 43.6
Sample C Male 29.9
Sample D Male 42.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 27.0
Min nTPM: 24.0
Sample A Male 24.0
Sample B Male 26.2
Sample C Female 25.0
Sample D Female 27.0
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 25.3
Min nTPM: 21.6
Sample A Male 21.6
Sample B Male 24.9
Sample C Female 25.3
Sample D Female 23.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68666983 Antisense, RP_050201_01_D05, Mouse strain C57BL/6J (56 days, male) 4.0

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