HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:38.5 nTPM
HPA Brain:190.1 nTPM
GTEx:38.5 nTPM
FANTOM5:141.2 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:111.5 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012866Antibody HPA014431
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 190.1
Sample id Sample description nTPM
Hippocampus
nTPM: 150.4
1898 Male, age 80, left hemisphere 183.0
2621 Female, age 67, right hemisphere 180.1
2148 Female, age 91, left hemisphere 166.2
1855 Male, age 76, left hemisphere 159.8
1911 Female, age 85, right hemisphere 115.3
2529 Female, age 94, left hemisphere 98.0
Dentate gyrus
nTPM: 152.2
2531 Female, age 67, both hemispheres 183.9
1927 Female, age 91, both hemispheres 176.7
2530 Female, age 94, left hemisphere 148.2
2010 Male, age 76, both hemispheres 146.5
2528 Male, age 74, both hemispheres 129.5
2246 Female, age 85, both hemispheres 128.4
Entorhinal gyrus
nTPM: 163.2
2613 Female, age 94, left hemisphere 207.5
2764 Male, age 80, right hemisphere 182.6
1938 Female, age 85, left hemisphere 166.7
2686 Male, age 75, right hemisphere 165.0
1787 Male, age 76, left hemisphere 153.9
2117 Female, age 91, right hemisphere 103.6
Hippocampus, CA1
nTPM: 156.5
2749 Male, age 80, left hemisphere 219.7
1873 Female, age 85, both hemispheres 155.4
2045 Male, age 76, both hemispheres 144.0
2082 Female, age 91, right hemisphere 135.6
2527 Male, age 74, both hemispheres 127.9
Hippocampus, CA2
nTPM: 143.7
1892 Male, age 76, both hemispheres 186.1
1963 Male, age 80, left hemisphere 182.3
2437 Female, age 94, left hemisphere 139.3
1940 Female, age 85, left hemisphere 130.7
2113 Female, age 91, right hemisphere 125.8
2249 Male, age 74, both hemispheres 97.8
Hippocampus, CA3
nTPM: 170.1
2861 Female, age 67, both hemispheres 249.3
2137 Male, age 80, left hemisphere 208.4
2620 Female, age 94, left hemisphere 203.7
1867 Male, age 76, both hemispheres 150.1
1891 Female, age 85, both hemispheres 108.9
2436 Male, age 74, both hemispheres 100.5
Parahippocampal cortex
nTPM: 162.6
2693 Female, age 94, both hemispheres 186.8
2622 Female, age 67, right hemisphere 186.5
2245 Female, age 91, both hemispheres 179.2
1850 Male, age 80, both hemispheres 176.8
2532 Female, age 72, left hemisphere 168.9
1933 Female, age 85, both hemispheres 165.7
1990 Female, age 91, right hemisphere 158.0
2250 Female, age 67, right hemisphere 153.5
2018 Male, age 76, both hemispheres 130.9
2692 Male, age 74, both hemispheres 119.2
Perirhinal gyrus
nTPM: 190.1
1847 Female, age 91, left hemisphere 223.4
2521 Female, age 94, right hemisphere 208.7
1794 Male, age 80, right hemisphere 196.7
1841 Female, age 85, right hemisphere 167.2
2848 Male, age 76, right hemisphere 154.3
Subiculum
nTPM: 120.9
1977 Female, age 85, both hemispheres 157.0
1901 Male, age 80, both hemispheres 130.7
2729 Female, age 91, right hemisphere 124.5
2619 Male, age 74, both hemispheres 116.5
2438 Female, age 94, left hemisphere 105.2
2042 Male, age 76, both hemispheres 91.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 38.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.5
Samples: 197

Max nTPM: 98.4
Min nTPM: 5.1
Std nTPM: 21.2
Median nTPM: 38.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 98.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 89.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 88.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 86.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 85.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 83.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 82.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 81.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 79.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 78.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 78.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 141.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.2
FF:10169-103B7 60 years, female 171.3
FF:10153-102I9 76 years, female 111.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.6
Pig sample Sample description nTPM
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 42.9
Min nTPM: 26.2
Sample A Female 42.9
Sample B Female 32.4
Sample C Male 33.3
Sample D Male 26.2
Dorsal hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 36.5
Min nTPM: 26.7
Sample A Female 33.9
Sample B Female 36.5
Sample C Male 32.1
Sample D Male 26.7
Entorhinal cortex
nTPM: 40.6
Samples: 4

Max nTPM: 46.2
Min nTPM: 32.9
Sample A Female 38.0
Sample B Female 46.2
Sample C Male 45.2
Sample D Male 32.9
Ventral hippocampus
nTPM: 37.2
Samples: 4

Max nTPM: 51.0
Min nTPM: 31.3
Sample A Female 33.4
Sample B Female 33.2
Sample C Male 51.0
Sample D Male 31.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 111.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 111.5
Samples: 4

Max nTPM: 130.7
Min nTPM: 99.0
Sample A Male 107.6
Sample B Male 108.7
Sample C Female 99.0
Sample D Female 130.7
Hippocampal formation
nTPM: 75.8
Samples: 4

Max nTPM: 84.2
Min nTPM: 71.3
Sample A Male 84.2
Sample B Male 71.3
Sample C Female 74.0
Sample D Female 73.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
75750309 Antisense, RP_060518_04_F08, Mouse strain C57BL/6J (56 days, male) 9.1
72008118 Antisense, RP_051017_01_B07, Mouse strain C57BL/6J (56 days, male) 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org