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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:253.0 nTPM
HPA Brain:307.5 nTPM
GTEx:253.0 nTPM
FANTOM5:498.3 Scaled Tags Per Million
Pig:148.4 nTPM
Mouse:76.9 nTPM
Allen mouse:2.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025798
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

307.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 223.2
2481 Female, age 94, left hemisphere 336.0
2288 Male, age 75, left hemisphere 288.2
2289 Male, age 61, right hemisphere 286.3
2290 Female, age 72, unknown 235.6
1854 Male, age 80, left hemisphere 184.2
1781 Male, age 74, unknown 169.4
1857 Female, age 85, left hemisphere 144.9
2846 Female, age 79, unknown 141.3
Globus pallidus, externus
nTPM: 307.5
2646 Male, age 61, right hemisphere 449.6
1996 Male, age 80, right hemisphere 445.8
2772 Female, age 79, unknown 273.0
2395 Male, age 75, both hemispheres 205.7
2567 Female, age 72, unknown 163.5
Globus pallidus, internus
nTPM: 278.9
2483 Female, age 94, right hemisphere 417.5
2037 Male, age 80, right hemisphere 361.0
1818 Male, age 74, unknown 290.3
2778 Female, age 91, both hemispheres 282.8
2287 Male, age 75, right hemisphere 253.1
2111 Female, age 85, right hemisphere 202.9
2566 Female, age 72, unknown 144.9
Nucleus accumbens
nTPM: 168.7
2286 Male, age 75, left hemisphere 265.0
2391 Female, age 94, left hemisphere 209.4
2732 Male, age 80, right hemisphere 189.5
2698 Female, age 72, unknown 149.8
1806 Female, age 85, left hemisphere 139.1
1856 Female, age 91, right hemisphere 134.5
1783 Male, age 74, unknown 134.4
2824 Male, age 61, right hemisphere 128.2
Nucleus basalis of Meynert
nTPM: 264.1
2569 Male, age 61, both hemispheres 489.2
2484 Female, age 94, left hemisphere 237.3
2393 Male, age 80, right hemisphere 210.7
2821 Male, age 75, both hemispheres 119.2
Nucleus of the diagonal band
nTPM: 123.0
1812 Female, age 91, both hemispheres 167.8
1979 Male, age 74, unknown 128.6
2195 Female, age 85, both hemispheres 106.8
2775 Male, age 80, right hemisphere 106.1
2029 Male, age 61, right hemisphere 105.5
Putamen
nTPM: 195.4
2482 Female, age 94, left hemisphere 258.4
1829 Male, age 74, unknown 232.1
2489 Female, age 72, unknown 218.1
2647 Male, age 75, left hemisphere 200.0
2466 Female, age 79, unknown 161.8
1937 Female, age 91, right hemisphere 161.5
1838 Male, age 80, right hemisphere 136.1
Septal nuclei
nTPM: 154.6
2199 Male, age 80, right hemisphere 226.3
2009 Female, age 91, both hemispheres 177.4
2059 Female, age 85, both hemispheres 172.6
2394 Male, age 61, left hemisphere 153.2
2629 Female, age 94, right hemisphere 141.0
2031 Female, age 72, unknown 115.5
1960 Male, age 74, unknown 96.1
Stria terminalis, bed nucleus
nTPM: 137.2
2201 Male, age 74, unknown 181.9
1974 Female, age 91, both hemispheres 127.0
2486 Female, age 94, both hemispheres 102.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 239.4
Samples: 246

Max nTPM: 652.6
Min nTPM: 26.4
Std nTPM: 104.6
Median nTPM: 230.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 652.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 546.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 532.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 509.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 507.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 507.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 475.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 472.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 449.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 449.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 441.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 433.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 428.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 425.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 408.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 408.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 405.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 404.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 388.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 387.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 386.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 379.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 377.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 376.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 375.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 374.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 373.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 370.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 369.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 368.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 367.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 366.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 365.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 363.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 362.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 361.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 359.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 354.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 352.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 351.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 346.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 334.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 333.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 331.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 330.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 329.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 327.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 327.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 321.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 320.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 320.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 319.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 315.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 314.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 314.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 313.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 312.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 311.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 311.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 310.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 308.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 307.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 306.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 305.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 302.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 301.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 294.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 294.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 293.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 291.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 289.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 287.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 283.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 282.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 282.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 281.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 277.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 277.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 273.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 273.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 273.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 272.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 270.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 270.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 266.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 265.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 264.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 264.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 264.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 262.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 261.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 260.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 259.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 258.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 258.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 256.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 255.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 254.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 253.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 251.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 251.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 250.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 250.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 248.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 247.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 246.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 246.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 245.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 244.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 237.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 237.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 237.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 236.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 236.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 235.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 235.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 234.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 234.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 234.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 234.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 230.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 230.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 230.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 229.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 229.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 227.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 227.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 225.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 224.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 223.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 220.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 219.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 218.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 216.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 215.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 214.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 213.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 211.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 210.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 210.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 207.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 207.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 206.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 204.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 202.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 201.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 196.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 195.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 193.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 193.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 192.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 192.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 192.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 191.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 191.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 189.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 189.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 189.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 188.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 187.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 186.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 185.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 182.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 180.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 179.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 178.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 177.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 176.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 174.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 174.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 174.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 172.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 171.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 171.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 171.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 170.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 167.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 166.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 165.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 164.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 163.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 161.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 161.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 160.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 160.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 160.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 157.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 156.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 155.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 154.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 152.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 149.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 148.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 148.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 147.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 146.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 146.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 146.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 145.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 145.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 143.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 143.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 142.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 140.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 138.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 135.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 134.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 129.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 128.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 127.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 127.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 127.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 126.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 124.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 123.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 121.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 121.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 120.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 114.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 107.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 100.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 97.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 95.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 94.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 94.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 85.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 70.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 70.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 60.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 59.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 45.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 26.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 133.9
Samples: 246

Max nTPM: 535.4
Min nTPM: 29.1
Std nTPM: 77.8
Median nTPM: 111.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 535.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 468.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 446.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 412.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 373.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 365.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 347.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 332.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 311.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 303.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 303.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 292.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 291.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 291.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 280.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 269.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 267.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 267.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 245.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 242.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 241.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 236.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 228.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 226.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 225.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 224.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 221.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 218.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 218.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 208.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 207.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 204.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 203.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 200.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 200.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 200.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 199.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 198.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 194.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 192.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 192.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 190.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 187.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 186.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 185.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 184.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 184.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 184.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 182.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 182.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 179.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 178.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 178.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 177.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 175.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 173.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 170.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 168.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 167.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 167.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 164.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 164.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 163.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 162.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 162.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 161.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 161.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 160.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 158.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 157.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 156.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 156.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 155.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 154.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 152.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 150.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 150.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 149.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 148.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 146.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 146.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 146.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 144.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 140.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 140.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 139.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 138.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 138.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 137.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 133.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 132.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 131.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 128.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 128.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 127.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 126.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 124.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 124.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 122.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 122.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 122.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 122.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 121.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 121.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 120.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 120.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 120.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 118.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 118.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 117.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 117.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 117.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 117.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 116.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 115.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 114.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 114.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 114.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 114.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 113.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 112.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 112.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 111.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 111.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 110.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 110.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 109.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 109.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 108.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 108.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 107.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 107.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 106.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 106.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 105.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 103.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 103.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 102.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 101.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 101.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 100.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 100.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 99.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 99.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 99.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 99.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 98.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 98.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 98.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 98.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 98.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 97.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 96.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 96.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 95.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 94.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 94.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 94.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 93.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 92.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 92.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 90.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 90.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 90.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 89.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 89.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 89.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 88.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 88.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 88.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 86.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 86.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 86.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 86.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 86.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 85.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 85.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 84.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 84.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 83.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 82.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 82.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 81.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 81.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 80.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 80.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 80.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 79.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 78.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 77.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 77.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 76.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 76.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 75.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 75.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 74.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 73.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 73.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 72.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 72.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 71.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 70.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 70.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 69.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 67.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 64.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 64.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 63.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 63.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 63.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 61.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 59.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 59.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 58.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 58.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 58.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 58.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 57.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 57.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 57.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 53.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 52.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 47.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 42.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 39.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 37.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 35.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 29.1
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Brain - Putamen (basal ganglia)
Average nTPM: 253.0
Samples: 205

Max nTPM: 782.3
Min nTPM: 25.2
Std nTPM: 137.1
Median nTPM: 220.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 782.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 697.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 692.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 672.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 638.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 593.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 551.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 532.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 519.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 493.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 492.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 487.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 473.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 468.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 465.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 456.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 451.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 447.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 446.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 443.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 439.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 435.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 433.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 431.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 422.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 417.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 417.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 416.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 412.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 410.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 399.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 397.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 384.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 384.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 383.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 380.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 379.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 379.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 377.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 373.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 366.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 360.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 355.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 353.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 351.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 350.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 344.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 343.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 335.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 334.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 328.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 327.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 326.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 324.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 324.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 317.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 311.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 308.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 308.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 307.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 304.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 304.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 298.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 296.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 295.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 294.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 291.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 290.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 289.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 286.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 279.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 275.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 275.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 274.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 272.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 271.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 271.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 271.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 269.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 266.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 261.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 259.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 257.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 253.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 248.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 247.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 245.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 244.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 243.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 240.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 238.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 235.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 234.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 231.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 228.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 225.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 225.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 223.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 222.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 222.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 221.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 220.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 220.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 219.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 217.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 215.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 215.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 215.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 214.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 213.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 213.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 210.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 210.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 208.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 207.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 207.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 205.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 203.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 202.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 202.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 200.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 198.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 198.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 197.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 197.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 195.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 194.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 194.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 191.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 191.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 189.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 188.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 186.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 186.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 184.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 184.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 183.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 179.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 177.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 177.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 173.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 172.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 172.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 171.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 171.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 170.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 170.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 169.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 168.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 165.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 165.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 164.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 164.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 162.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 159.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 158.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 158.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 157.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 153.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 149.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 149.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 148.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 142.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 140.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 139.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 134.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 134.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 134.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 132.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 132.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 128.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 128.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 126.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 121.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 118.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 115.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 113.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 112.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 108.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 108.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 106.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 106.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 106.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 104.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 102.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 96.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 96.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 94.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 88.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 78.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 64.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 62.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 61.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 60.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 56.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 54.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 52.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 50.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 25.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

498.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 247.2
FF:10164-103B2 76 years, female 247.2
Nucleus accumbens
Scaled Tags Per Million: 229.6
FF:10037-101F1 23-56 years, mixed 229.6
Putamen
Scaled Tags Per Million: 207.5
FF:10176-103C5 60 years, female 207.5
Globus pallidus
Scaled Tags Per Million: 498.3
FF:10175-103C4 60 years, female 721.2
FF:10161-103A8 76 years, female 275.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.4
Pig sample Sample description nTPM
Caudate
nTPM: 104.7
Samples: 4

Max nTPM: 146.9
Min nTPM: 81.5
Sample A Female 86.9
Sample B Female 103.3
Sample C Male 146.9
Sample D Male 81.5
Putamen
nTPM: 130.2
Samples: 4

Max nTPM: 172.0
Min nTPM: 89.1
Sample A Female 172.0
Sample B Female 89.1
Sample C Male 165.1
Sample D Male 94.4
Septum
nTPM: 148.4
Samples: 4

Max nTPM: 229.2
Min nTPM: 55.0
Sample A Female 55.0
Sample B Female 98.9
Sample C Male 229.2
Sample D Male 210.5
Ventral pallidum
nTPM: 129.5
Samples: 4

Max nTPM: 271.6
Min nTPM: 32.8
Sample A Female 32.8
Sample B Female 155.8
Sample C Male 271.6
Sample D Male 57.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 26.4
Samples: 4

Max nTPM: 39.3
Min nTPM: 15.2
Sample A Male 35.5
Sample B Male 39.3
Sample C Female 15.4
Sample D Female 15.2
Septum
nTPM: 76.9
Samples: 4

Max nTPM: 93.0
Min nTPM: 49.2
Sample A Male 93.0
Sample B Male 49.2
Sample C Female 80.9
Sample D Female 84.6
Ventral forebrain
nTPM: 29.5
Samples: 4

Max nTPM: 58.4
Min nTPM: 14.2
Sample A Male 16.3
Sample B Male 58.4
Sample C Female 28.9
Sample D Female 14.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
87 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 0.6
88 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 2.8
87 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 2.8
88 Antisense, RP_040315_01_23, Mouse strain C57BL/6J (56 days, male) 2.0

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