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CHRND
HPA
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  • SUMMARY

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  • BRAIN

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  • CHRND
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CHRND
Synonyms ACHRD
Gene descriptioni

Full gene name according to HGNC.

Cholinergic receptor nicotinic delta subunit
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q37.1
Chromosome location (bp) 232525993 - 232536667
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000135902 (version 109)
Entrez gene 1144
HGNC HGNC:1965
UniProt Q07001 (UniProt - Evidence at protein level)
neXtProt NX_Q07001
GeneCards CHRND
Antibodypedia CHRND antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Ligand-gated ion channel, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

The acetylcholine receptor of muscle has 5 subunits of 4 different types: 2 alpha and 1 each of beta, gamma and delta subunits. After acetylcholine binding, the receptor undergoes an extensive conformation change that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. Defects in this gene are a cause of multiple pterygium syndrome lethal type (MUPSL), congenital myasthenic syndrome slow-channel type (SCCMS), and congenital myasthenic syndrome fast-channel type (FCCMS). Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CHRND-201
ENSP00000258385
ENST00000258385
Q07001
[Direct mapping] Acetylcholine receptor subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0003009 [skeletal muscle contraction]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005892 [acetylcholine-gated channel complex]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006936 [muscle contraction]
GO:0007165 [signal transduction]
GO:0007268 [chemical synaptic transmission]
GO:0015276 [ligand-gated ion channel activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0030594 [neurotransmitter receptor activity]
GO:0031594 [neuromuscular junction]
GO:0034220 [ion transmembrane transport]
GO:0042166 [acetylcholine binding]
GO:0042391 [regulation of membrane potential]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0048630 [skeletal muscle tissue growth]
GO:0050877 [nervous system process]
GO:0050881 [musculoskeletal movement]
GO:0050905 [neuromuscular process]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0095500 [acetylcholine receptor signaling pathway]
GO:0099634 [postsynaptic specialization membrane]
GO:0110165 [cellular anatomical entity]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
Show all
517 aa
58.9 kDa
Yes 4
CHRND-205
ENSP00000404950
ENST00000449596
C9JJV8
[Direct mapping] Acetylcholine receptor subunit delta
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Nervous system diseases
   Other nervous and sensory system diseases
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034220 [ion transmembrane transport]
Show all
172 aa
19.6 kDa
Yes 0
CHRND-206
ENSP00000438380
ENST00000543200
Q07001
[Direct mapping] Acetylcholine receptor subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Other congenital malformations
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005892 [acetylcholine-gated channel complex]
GO:0006811 [ion transport]
GO:0006936 [muscle contraction]
GO:0007165 [signal transduction]
GO:0007268 [chemical synaptic transmission]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0030594 [neurotransmitter receptor activity]
GO:0031594 [neuromuscular junction]
GO:0034220 [ion transmembrane transport]
GO:0042391 [regulation of membrane potential]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0048630 [skeletal muscle tissue growth]
GO:0050877 [nervous system process]
GO:0050881 [musculoskeletal movement]
GO:0050905 [neuromuscular process]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0095500 [acetylcholine receptor signaling pathway]
GO:0110165 [cellular anatomical entity]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
Show all
502 aa
57.1 kDa
Yes 4

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