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TMBIM1
HPA
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  • TMBIM1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TMBIM1
Synonyms LFG3, PP1201, RECS1
Gene descriptioni

Full gene name according to HGNC.

Transmembrane BAX inhibitor motif containing 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q35
Chromosome location (bp) 218274197 - 218292586
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

16
Ensembl ENSG00000135926 (version 109)
Entrez gene 64114
HGNC HGNC:23410
UniProt Q969X1 (UniProt - Evidence at protein level)
neXtProt NX_Q969X1
GeneCards TMBIM1
Antibodypedia TMBIM1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Negatively regulates aortic matrix metalloproteinase-9 (MMP9) production and may play a protective role in vascular remodeling.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables death receptor binding activity. Involved in negative regulation of Fas signaling pathway; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors; and negative regulation of protein localization to plasma membrane. Located in Golgi apparatus; endosome membrane; and lysosomal membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TMBIM1-201
ENSP00000258412
ENST00000258412
Q969X1
[Direct mapping] Protein lifeguard 3
Show all
A0A024R472
[Target identity:100%; Query identity:100%] Transmembrane BAX inhibitor motif containing 1, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005123 [death receptor binding]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0010008 [endosome membrane]
GO:0016020 [membrane]
GO:0035579 [specific granule membrane]
GO:0043086 [negative regulation of catalytic activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0070062 [extracellular exosome]
GO:1902042 [negative regulation of extrinsic apoptotic signaling pathway via death domain receptors]
GO:1902045 [negative regulation of Fas signaling pathway]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:2000504 [positive regulation of blood vessel remodeling]
GO:2001234 [negative regulation of apoptotic signaling pathway]
Show all
311 aa
34.6 kDa
No 8
TMBIM1-202
ENSP00000380025
ENST00000396809
Q969X1
[Direct mapping] Protein lifeguard 3
Show all
A0A024R472
[Target identity:100%; Query identity:100%] Transmembrane BAX inhibitor motif containing 1, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005123 [death receptor binding]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0010008 [endosome membrane]
GO:0016020 [membrane]
GO:0035579 [specific granule membrane]
GO:0043086 [negative regulation of catalytic activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0070062 [extracellular exosome]
GO:1902042 [negative regulation of extrinsic apoptotic signaling pathway via death domain receptors]
GO:1902045 [negative regulation of Fas signaling pathway]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:2000504 [positive regulation of blood vessel remodeling]
GO:2001234 [negative regulation of apoptotic signaling pathway]
Show all
311 aa
34.6 kDa
No 8
TMBIM1-203
ENSP00000408729
ENST00000413976
C9JM62
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
46 aa
4.8 kDa
No 0
TMBIM1-204
ENSP00000406744
ENST00000418569
C9IZ27
[Direct mapping] Protein lifeguard 3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
150 aa
16.5 kDa
No 2
TMBIM1-205
ENSP00000413624
ENST00000420341
A0A1D5RMQ2
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
8 aa
0.8 kDa
No 0
TMBIM1-206
ENSP00000399345
ENST00000425694
C9JW19
[Direct mapping] Protein lifeguard 3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
167 aa
18.5 kDa
No 2
TMBIM1-207
ENSP00000399987
ENST00000429501
C9JWV9
[Direct mapping] Protein lifeguard 3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
171 aa
19 kDa
No 2
TMBIM1-208
ENSP00000405516
ENST00000434015
C9JAK9
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
67 aa
7.1 kDa
No 0
TMBIM1-211
ENSP00000412518
ENST00000440422
C9IYT2
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
107 aa
11.6 kDa
No 0
TMBIM1-212
ENSP00000403462
ENST00000444000
C9JDV0
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
90 aa
9.5 kDa
No 0
TMBIM1-213
ENSP00000410136
ENST00000444183
C9JEN3
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
106 aa
11.5 kDa
No 0
TMBIM1-214
ENSP00000409738
ENST00000444881
Q969X1
[Direct mapping] Protein lifeguard 3
Show all
A0A024R472
[Target identity:100%; Query identity:100%] Transmembrane BAX inhibitor motif containing 1, isoform CRA_a
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005123 [death receptor binding]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0010008 [endosome membrane]
GO:0016020 [membrane]
GO:0035579 [specific granule membrane]
GO:0043086 [negative regulation of catalytic activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0070062 [extracellular exosome]
GO:1902042 [negative regulation of extrinsic apoptotic signaling pathway via death domain receptors]
GO:1902045 [negative regulation of Fas signaling pathway]
GO:1903077 [negative regulation of protein localization to plasma membrane]
GO:2000504 [positive regulation of blood vessel remodeling]
GO:2001234 [negative regulation of apoptotic signaling pathway]
Show all
311 aa
34.6 kDa
No 8
TMBIM1-215
ENSP00000401491
ENST00000445635
B3KSM0
[Direct mapping] Protein lifeguard 3; cDNA FLJ36592 fis, clone TRACH2014046, highly similar to Transmembrane BAX inhibitor motif-containing protein 1; cDNA FLJ54055, highly similar to Transmembrane BAX inhibitor motif-containing protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
137 aa
15.3 kDa
No 4
TMBIM1-216
ENSP00000394946
ENST00000451181
C9JN47
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
73 aa
7.7 kDa
No 0
TMBIM1-217
ENSP00000395614
ENST00000453281
C9JI44
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
84 aa
8.9 kDa
No 0
TMBIM1-218
ENSP00000410771
ENST00000453776
C9JAP5
[Direct mapping] Protein lifeguard 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0043231 [intracellular membrane-bounded organelle]
Show all
91 aa
9.6 kDa
No 0

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