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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.1 nTPM
HPA Brain:108.3 nTPM
GTEx:55.1 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:108.1 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027546
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 108.3
2481 Female, age 94, left hemisphere 197.0
1857 Female, age 85, left hemisphere 162.9
2290 Female, age 72, unknown 104.9
2289 Male, age 61, right hemisphere 103.4
2288 Male, age 75, left hemisphere 102.2
1854 Male, age 80, left hemisphere 96.5
1781 Male, age 74, unknown 51.0
2846 Female, age 79, unknown 48.8
Globus pallidus, externus
nTPM: 84.5
1996 Male, age 80, right hemisphere 130.5
2646 Male, age 61, right hemisphere 119.5
2395 Male, age 75, both hemispheres 69.2
2772 Female, age 79, unknown 60.5
2567 Female, age 72, unknown 42.7
Globus pallidus, internus
nTPM: 88.3
2483 Female, age 94, right hemisphere 176.2
2037 Male, age 80, right hemisphere 113.7
1818 Male, age 74, unknown 107.8
2287 Male, age 75, right hemisphere 83.8
2778 Female, age 91, both hemispheres 56.0
2566 Female, age 72, unknown 41.5
2111 Female, age 85, right hemisphere 38.9
Nucleus accumbens
nTPM: 83.9
1806 Female, age 85, left hemisphere 150.4
2286 Male, age 75, left hemisphere 121.5
2391 Female, age 94, left hemisphere 83.0
1856 Female, age 91, right hemisphere 79.3
2824 Male, age 61, right hemisphere 65.2
2698 Female, age 72, unknown 61.6
1783 Male, age 74, unknown 59.9
2732 Male, age 80, right hemisphere 50.0
Nucleus basalis of Meynert
nTPM: 88.0
2569 Male, age 61, both hemispheres 137.5
2484 Female, age 94, left hemisphere 97.8
2393 Male, age 80, right hemisphere 63.4
2821 Male, age 75, both hemispheres 53.1
Nucleus of the diagonal band
nTPM: 55.3
1979 Male, age 74, unknown 86.0
1812 Female, age 91, both hemispheres 60.4
2195 Female, age 85, both hemispheres 52.1
2775 Male, age 80, right hemisphere 46.8
2029 Male, age 61, right hemisphere 31.3
Putamen
nTPM: 81.0
2482 Female, age 94, left hemisphere 135.5
1838 Male, age 80, right hemisphere 85.0
2647 Male, age 75, left hemisphere 79.7
1937 Female, age 91, right hemisphere 72.2
1829 Male, age 74, unknown 67.9
2466 Female, age 79, unknown 66.4
2489 Female, age 72, unknown 60.2
Septal nuclei
nTPM: 51.1
2059 Female, age 85, both hemispheres 76.0
2199 Male, age 80, right hemisphere 70.5
2394 Male, age 61, left hemisphere 57.7
2009 Female, age 91, both hemispheres 50.3
2031 Female, age 72, unknown 38.6
1960 Male, age 74, unknown 36.6
2629 Female, age 94, right hemisphere 27.8
Stria terminalis, bed nucleus
nTPM: 56.4
2201 Male, age 74, unknown 74.6
2486 Female, age 94, both hemispheres 49.6
1974 Female, age 91, both hemispheres 45.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 55.1
Samples: 246

Max nTPM: 168.1
Min nTPM: 4.7
Std nTPM: 26.8
Median nTPM: 49.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 168.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 160.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 139.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 132.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 125.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 117.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 116.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 116.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 115.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 109.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 109.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 106.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 104.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 104.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 103.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 97.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 97.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 93.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 92.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 92.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 90.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 88.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 85.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 85.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 84.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 83.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 82.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 82.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 82.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 81.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 81.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 81.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 80.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 80.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 80.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 78.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 76.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 75.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 75.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 75.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 74.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 73.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 72.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 70.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 69.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 68.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 68.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 67.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 67.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 66.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 66.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 65.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 64.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 63.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 62.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 62.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 60.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 59.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 59.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 59.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 57.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 55.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 55.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 55.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 54.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 53.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 52.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 51.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 50.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 50.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 50.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 50.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 49.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 49.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 48.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 48.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 48.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 47.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 47.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 46.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 46.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 45.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 44.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 43.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 43.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 43.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 43.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 42.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 41.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 40.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 40.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 39.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 38.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 37.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 37.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 37.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 36.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 36.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 35.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 35.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 35.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 35.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 34.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 34.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 34.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 33.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 33.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 33.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 33.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 32.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 32.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 32.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 30.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 30.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 30.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 29.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 29.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 28.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 28.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 27.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 26.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 26.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 26.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 25.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 24.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 24.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 24.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 23.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 23.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 23.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 22.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 21.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 21.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 19.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 18.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 18.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 16.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 16.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 15.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 5.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 4.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 45.8
Samples: 246

Max nTPM: 156.1
Min nTPM: 7.4
Std nTPM: 25.8
Median nTPM: 39.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 156.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 142.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 133.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 127.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 126.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 124.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 122.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 116.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 109.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 106.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 105.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 100.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 96.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 95.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 94.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 94.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 92.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 91.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 90.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 88.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 87.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 80.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 79.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 78.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 77.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 77.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 76.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 76.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 70.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 70.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 70.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 70.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 69.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 68.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 68.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 66.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 66.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 64.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 63.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 63.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 62.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 62.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 62.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 62.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 62.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 61.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 61.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 60.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 60.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 59.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 58.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 57.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 57.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 57.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 56.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 54.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 54.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 54.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 53.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 53.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 53.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 52.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 52.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 51.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 51.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 50.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 50.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 49.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 49.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 48.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 48.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 47.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 47.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 47.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 46.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 46.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 46.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 46.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 46.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 45.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 45.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 45.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 45.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 45.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 45.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 44.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 44.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 44.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 43.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 43.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 43.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 43.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 42.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 41.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 41.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 41.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 40.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 40.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 40.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 39.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 39.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 39.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 39.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 38.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 38.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 38.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 38.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 38.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 38.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 38.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 38.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 37.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 37.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 37.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 37.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 37.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 36.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 36.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 35.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 35.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 35.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 35.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 35.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 35.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 35.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 34.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 34.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 34.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 34.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 34.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 34.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 33.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 33.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 32.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 32.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 32.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 31.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 31.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 31.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 31.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 30.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 30.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 30.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 30.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 29.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 29.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 29.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 29.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 28.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 28.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 27.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 27.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 27.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 27.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 27.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 26.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 26.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 26.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 26.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 25.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 25.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 25.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 24.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 24.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 24.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 24.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 24.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 24.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 24.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 24.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 24.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 24.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 23.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 23.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 23.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 23.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 23.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 22.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 22.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 21.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 21.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 21.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 21.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 21.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 20.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 20.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 19.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 19.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 19.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 19.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 19.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 18.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 17.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 16.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 16.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 16.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 16.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 16.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 14.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 13.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 13.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 12.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 8.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 7.4
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Brain - Putamen (basal ganglia)
Average nTPM: 52.3
Samples: 205

Max nTPM: 189.0
Min nTPM: 4.9
Std nTPM: 28.7
Median nTPM: 49.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 189.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 145.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 127.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 123.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 120.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 115.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 112.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 110.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 103.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 103.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 102.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 102.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 97.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 96.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 95.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 95.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 95.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 94.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 91.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 90.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 89.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 88.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 88.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 85.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 85.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 84.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 83.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 83.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 81.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 81.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 81.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 81.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 81.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 79.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 79.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 78.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 78.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 77.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 75.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 75.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 73.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 73.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 72.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 71.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 71.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 71.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 70.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 69.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 69.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 69.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 68.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 67.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 66.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 65.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 64.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 63.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 63.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 62.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 60.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 60.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 59.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 59.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 59.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 59.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 58.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 57.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 57.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 57.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 57.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 56.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 56.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 56.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 55.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 54.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 54.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 52.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 52.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 51.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 51.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 51.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 50.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 50.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 49.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 47.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 46.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 45.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 45.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 43.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 43.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 43.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 42.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 40.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 40.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 39.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 38.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 38.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 38.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 37.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 37.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 35.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 35.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 35.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 35.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 33.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 33.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 32.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 31.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 31.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 31.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 31.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 30.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 30.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 30.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 30.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 30.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 29.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 29.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 28.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 27.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 27.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 27.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 26.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 25.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 24.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 23.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 22.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 22.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 22.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 22.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 21.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 20.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 20.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 20.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 19.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 19.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 19.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 19.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 18.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 17.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 15.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 14.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 13.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 13.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 12.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 12.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 6.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 6.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 5.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 62.1
FF:10164-103B2 76 years, female 62.1
Nucleus accumbens
Scaled Tags Per Million: 57.5
FF:10037-101F1 23-56 years, mixed 57.5
Putamen
Scaled Tags Per Million: 106.0
FF:10176-103C5 60 years, female 106.0
Globus pallidus
Scaled Tags Per Million: 77.1
FF:10175-103C4 60 years, female 109.0
FF:10161-103A8 76 years, female 45.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.9
Pig sample Sample description nTPM
Caudate
nTPM: 14.3
Samples: 4

Max nTPM: 20.4
Min nTPM: 11.4
Sample A Female 20.4
Sample B Female 11.4
Sample C Male 13.9
Sample D Male 11.4
Putamen
nTPM: 19.3
Samples: 4

Max nTPM: 49.6
Min nTPM: 8.4
Sample A Female 49.6
Sample B Female 8.4
Sample C Male 9.4
Sample D Male 9.7
Septum
nTPM: 23.9
Samples: 4

Max nTPM: 50.0
Min nTPM: 10.0
Sample A Female 23.0
Sample B Female 10.0
Sample C Male 50.0
Sample D Male 12.5
Ventral pallidum
nTPM: 16.2
Samples: 4

Max nTPM: 30.3
Min nTPM: 9.6
Sample A Female 11.9
Sample B Female 9.6
Sample C Male 30.3
Sample D Male 12.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 60.0
Samples: 4

Max nTPM: 63.1
Min nTPM: 54.9
Sample A Male 63.1
Sample B Male 62.9
Sample C Female 54.9
Sample D Female 59.1
Septum
nTPM: 108.1
Samples: 4

Max nTPM: 126.3
Min nTPM: 93.7
Sample A Male 97.5
Sample B Male 126.3
Sample C Female 93.7
Sample D Female 115.0
Ventral forebrain
nTPM: 56.0
Samples: 4

Max nTPM: 69.6
Min nTPM: 49.6
Sample A Male 52.0
Sample B Male 69.6
Sample C Female 49.6
Sample D Female 52.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
70431307 Antisense, RP_050614_02_E11, Mouse strain C57BL/6J (56 days, male) 0.7
74750017 Antisense, RP_060220_05_E07, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.4
70431307 Antisense, RP_050614_02_E11, Mouse strain C57BL/6J (56 days, male) 0.7
74750017 Antisense, RP_060220_05_E07, Mouse strain C57BL/6J (56 days, male) 0.2

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