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TBRG4
HPA
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  • SUMMARY

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  • TBRG4
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TBRG4
Synonyms Cpr2, FASTKD4, H_TD2522F11.8, KIAA0948
Gene descriptioni

Full gene name according to HGNC.

Transforming growth factor beta regulator 4
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband p13
Chromosome location (bp) 45100100 - 45112047
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000136270 (version 109)
Entrez gene 9238
HGNC HGNC:17443
UniProt Q969Z0 (UniProt - Evidence at protein level)
neXtProt NX_Q969Z0
GeneCards TBRG4
Antibodypedia TBRG4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in processing of mitochondrial RNA precursors and in stabilization of a subset of mature mitochondrial RNA species, such as MT-CO1, MT-CO2, MT-CYB, MT-CO3, MT-ND3, MT-ND5 and MT-ATP8/6. May play a role in cell cycle progression 1.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity. Involved in mitochondrial mRNA processing and regulation of mitochondrial mRNA stability. Located in mitochondrial matrix. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TBRG4-201
ENSP00000258770
ENST00000258770
Q969Z0
[Direct mapping] FAST kinase domain-containing protein 4
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000963 [mitochondrial RNA processing]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016071 [mRNA metabolic process]
GO:0035770 [ribonucleoprotein granule]
GO:0044528 [regulation of mitochondrial mRNA stability]
GO:0051726 [regulation of cell cycle]
GO:0090615 [mitochondrial mRNA processing]
Show all
631 aa
70.7 kDa
No 0
TBRG4-202
ENSP00000354992
ENST00000361278
Q969Z0
[Direct mapping] FAST kinase domain-containing protein 4
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000963 [mitochondrial RNA processing]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016071 [mRNA metabolic process]
GO:0035770 [ribonucleoprotein granule]
GO:0044528 [regulation of mitochondrial mRNA stability]
GO:0051726 [regulation of cell cycle]
GO:0090615 [mitochondrial mRNA processing]
Show all
521 aa
58.4 kDa
No 0
TBRG4-203
ENSP00000379016
ENST00000395655
Q969Z0
[Direct mapping] FAST kinase domain-containing protein 4
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000963 [mitochondrial RNA processing]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016071 [mRNA metabolic process]
GO:0035770 [ribonucleoprotein granule]
GO:0044528 [regulation of mitochondrial mRNA stability]
GO:0051726 [regulation of cell cycle]
GO:0090615 [mitochondrial mRNA processing]
Show all
521 aa
58.4 kDa
No 0
TBRG4-204
ENSP00000417743
ENST00000461363
C9J7P5
[Direct mapping] FAST kinase domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
248 aa
28.4 kDa
No 0
TBRG4-206
ENSP00000417324
ENST00000475893
C9J347
[Direct mapping] FAST kinase domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
128 aa
14.1 kDa
No 0
TBRG4-209
ENSP00000418631
ENST00000478532
C9IZN7
[Direct mapping] FAST kinase domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
283 aa
31.9 kDa
No 0
TBRG4-210
ENSP00000417967
ENST00000482285
C9J5A2
[Direct mapping] FAST kinase domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
118 aa
13 kDa
No 0
TBRG4-212
ENSP00000417974
ENST00000483615
H7C4R5
[Direct mapping] FAST kinase domain-containing protein 4
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0044528 [regulation of mitochondrial mRNA stability]
Show all
274 aa
29.5 kDa
No 0
TBRG4-215
ENSP00000420597
ENST00000494076
Q969Z0
[Direct mapping] FAST kinase domain-containing protein 4
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000963 [mitochondrial RNA processing]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0008284 [positive regulation of cell population proliferation]
GO:0016071 [mRNA metabolic process]
GO:0035770 [ribonucleoprotein granule]
GO:0044528 [regulation of mitochondrial mRNA stability]
GO:0051726 [regulation of cell cycle]
GO:0090615 [mitochondrial mRNA processing]
Show all
631 aa
70.7 kDa
No 0
TBRG4-216
ENSP00000417071
ENST00000495078
C9J618
[Direct mapping] FAST kinase domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
103 aa
11.2 kDa
No 0

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