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ABI1
HPA
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  • SUMMARY

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  • ABI1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ABI1
Synonyms ABI-1, E3B1, SSH3BP1
Gene descriptioni

Full gene name according to HGNC.

Abl interactor 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband p12.1
Chromosome location (bp) 26746593 - 26861087
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000136754 (version 109)
Entrez gene 10006
HGNC HGNC:11320
UniProt Q8IZP0 (UniProt - Evidence at protein level)
neXtProt NX_Q8IZP0
GeneCards ABI1
Antibodypedia ABI1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May act in negative regulation of cell growth and transformation by interacting with nonreceptor tyrosine kinases ABL1 and/or ABL2. May play a role in regulation of EGF-induced Erk pathway activation. Involved in cytoskeletal reorganization and EGFR signaling. Together with EPS8 participates in transduction of signals from Ras to Rac. In vitro, a trimeric complex of ABI1, EPS8 and SOS1 exhibits Rac specific guanine nucleotide exchange factor (GEF) activity and ABI1 seems to act as an adapter in the complex. Regulates ABL1/c-Abl-mediated phosphorylation of ENAH. Recruits WASF1 to lamellipodia and there seems to regulate WASF1 protein level. In brain, seems to regulate the dendritic outgrowth and branching as well as to determine the shape and number of synaptic contacts of developing neurons.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the Abelson-interactor family of adaptor proteins. These proteins facilitate signal transduction as components of several multiprotein complexes, and regulate actin polymerization and cytoskeletal remodeling through interactions with Abelson tyrosine kinases. The encoded protein plays a role in macropinocytosis as a component of the WAVE2 complex, and also forms a complex with EPS8 and SOS1 that mediates signal transduction from Ras to Rac. This gene may play a role in the progression of several malignancies including melanoma, colon cancer and breast cancer, and a t(10;11) chromosomal translocation involving this gene and the MLL gene has been associated with acute myeloid leukemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 14. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ABI1-201
ENSP00000279599
ENST00000346832
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
496 aa
53.9 kDa
No 0
ABI1-202
ENSP00000352114
ENST00000359188
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
480 aa
52.4 kDa
No 0
ABI1-203
ENSP00000365307
ENST00000376137
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
B6VEX3
[Target identity:100%; Query identity:100%] Abl-interactor 1 variant 41
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
422 aa
46.4 kDa
No 0
ABI1-204
ENSP00000365308
ENST00000376138
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
452 aa
49.4 kDa
No 0
ABI1-205
ENSP00000365309
ENST00000376139
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
476 aa
51.8 kDa
No 0
ABI1-206
ENSP00000365310
ENST00000376140
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001756 [somitogenesis]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0031252 [cell leading edge]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0035855 [megakaryocyte development]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0048813 [dendrite morphogenesis]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0072673 [lamellipodium morphogenesis]
GO:0110165 [cellular anatomical entity]
Show all
481 aa
52.5 kDa
No 0
ABI1-207
ENSP00000365312
ENST00000376142
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
508 aa
55.1 kDa
No 0
ABI1-208
ENSP00000365330
ENST00000376160
A0A0A0MRT6
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005856 [cytoskeleton]
GO:0008154 [actin polymerization or depolymerization]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0042995 [cell projection]
GO:0110165 [cellular anatomical entity]
Show all
475 aa
51.8 kDa
No 0
ABI1-209
ENSP00000365336
ENST00000376166
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
446 aa
48.7 kDa
No 0
ABI1-210
ENSP00000365340
ENST00000376170
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
451 aa
49.3 kDa
No 0
ABI1-212
ENSP00000440101
ENST00000490841
Q8IZP0
[Direct mapping] Abl interactor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0008092 [cytoskeletal protein binding]
GO:0008154 [actin polymerization or depolymerization]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014069 [postsynaptic density]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0030426 [growth cone]
GO:0031209 [SCAR complex]
GO:0032433 [filopodium tip]
GO:0035591 [signaling adaptor activity]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045296 [cadherin binding]
GO:0061098 [positive regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0110165 [cellular anatomical entity]
Show all
329 aa
35.9 kDa
No 0
ABI1-213
ENSP00000439646
ENST00000536334
B6VEX4
[Direct mapping] Abl interactor 1; Abl-interactor 1 variant 21
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005856 [cytoskeleton]
GO:0008154 [actin polymerization or depolymerization]
GO:0030027 [lamellipodium]
GO:0030175 [filopodium]
GO:0030296 [protein tyrosine kinase activator activity]
GO:0042995 [cell projection]
GO:0110165 [cellular anatomical entity]
Show all
393 aa
43.3 kDa
No 0

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