We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLC31A2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SLC31A2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:31.0 nTPM
HPA Brain:87.2 nTPM
GTEx:31.0 nTPM
FANTOM5:146.1 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:7.7 nTPM
Allen mouse:11.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014861Antibody CAB080265Antibody CAB080267
Glial cells MediumNot detectedMedium
Neuronal cells HighHighHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 21.0
2288 Male, age 75, left hemisphere 39.5
2481 Female, age 94, left hemisphere 25.5
2846 Female, age 79, unknown 22.9
1854 Male, age 80, left hemisphere 19.8
1781 Male, age 74, unknown 19.4
2290 Female, age 72, unknown 16.9
2289 Male, age 61, right hemisphere 12.8
1857 Female, age 85, left hemisphere 11.4
Globus pallidus, externus
nTPM: 80.5
1996 Male, age 80, right hemisphere 101.3
2395 Male, age 75, both hemispheres 90.2
2772 Female, age 79, unknown 77.8
2567 Female, age 72, unknown 73.2
2646 Male, age 61, right hemisphere 60.0
Globus pallidus, internus
nTPM: 87.2
2111 Female, age 85, right hemisphere 139.0
2778 Female, age 91, both hemispheres 98.7
2287 Male, age 75, right hemisphere 91.2
2037 Male, age 80, right hemisphere 85.7
2566 Female, age 72, unknown 80.6
1818 Male, age 74, unknown 78.8
2483 Female, age 94, right hemisphere 36.2
Nucleus accumbens
nTPM: 32.3
2391 Female, age 94, left hemisphere 72.6
2286 Male, age 75, left hemisphere 42.1
2732 Male, age 80, right hemisphere 36.9
2698 Female, age 72, unknown 34.1
1806 Female, age 85, left hemisphere 23.5
2824 Male, age 61, right hemisphere 20.5
1783 Male, age 74, unknown 19.9
1856 Female, age 91, right hemisphere 8.9
Nucleus basalis of Meynert
nTPM: 34.4
2569 Male, age 61, both hemispheres 44.5
2821 Male, age 75, both hemispheres 42.1
2484 Female, age 94, left hemisphere 26.7
2393 Male, age 80, right hemisphere 24.2
Nucleus of the diagonal band
nTPM: 7.6
1812 Female, age 91, both hemispheres 15.4
1979 Male, age 74, unknown 7.8
2029 Male, age 61, right hemisphere 7.2
2775 Male, age 80, right hemisphere 4.2
2195 Female, age 85, both hemispheres 3.5
Putamen
nTPM: 27.0
2482 Female, age 94, left hemisphere 43.6
1829 Male, age 74, unknown 33.6
2647 Male, age 75, left hemisphere 29.6
2489 Female, age 72, unknown 27.1
2466 Female, age 79, unknown 24.3
1937 Female, age 91, right hemisphere 22.3
1838 Male, age 80, right hemisphere 8.2
Septal nuclei
nTPM: 15.1
2394 Male, age 61, left hemisphere 41.8
2199 Male, age 80, right hemisphere 17.3
2629 Female, age 94, right hemisphere 12.3
2059 Female, age 85, both hemispheres 12.0
2031 Female, age 72, unknown 9.0
2009 Female, age 91, both hemispheres 8.3
1960 Male, age 74, unknown 4.7
Stria terminalis, bed nucleus
nTPM: 11.8
2201 Male, age 74, unknown 13.3
1974 Female, age 91, both hemispheres 12.5
2486 Female, age 94, both hemispheres 9.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 20.4
Samples: 246

Max nTPM: 65.1
Min nTPM: 3.8
Std nTPM: 11.4
Median nTPM: 16.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 65.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 59.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 49.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 46.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 45.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 44.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 44.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 44.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 42.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 42.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 41.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 40.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 39.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 39.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 38.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 38.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 37.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 37.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 36.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 35.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 35.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 34.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 34.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 33.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 33.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 33.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 32.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 31.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 31.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 29.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 29.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 29.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 29.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 29.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 29.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 29.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 29.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 29.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 29.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 29.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 29.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 28.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 28.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 28.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 28.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 28.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 27.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 27.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 27.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 26.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 26.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 25.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 24.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 24.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 24.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 24.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 23.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 23.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 23.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 23.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 23.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 23.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 23.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 22.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 22.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 22.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 22.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 22.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 22.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 22.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 22.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 21.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 21.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 21.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 20.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 20.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 19.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 19.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 19.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 19.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 19.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 18.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 18.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 18.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 18.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 18.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 18.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 17.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 17.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 17.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 17.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 16.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 16.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 16.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 16.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 16.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 16.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 16.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 16.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 15.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 15.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 15.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 15.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 15.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 15.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 14.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 14.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 14.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 14.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 13.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 13.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 13.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 13.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 13.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 13.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 13.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 13.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 13.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 13.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 13.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 12.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 12.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 12.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 12.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 12.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 12.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 12.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 12.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 12.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 12.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 12.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 11.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 11.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 11.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 11.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 11.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 11.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 11.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 11.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 11.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 11.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 10.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 10.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 10.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 10.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 10.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 10.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 10.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 9.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 9.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 9.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 9.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 9.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 9.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 9.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 9.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 9.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 9.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 9.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 9.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 9.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 9.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 9.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 9.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 9.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 9.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 9.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 8.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 8.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 8.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 8.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 7.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 7.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 7.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 7.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 7.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 5.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 5.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 13.0
Samples: 246

Max nTPM: 109.1
Min nTPM: 0.0
Std nTPM: 12.2
Median nTPM: 9.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 109.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 70.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 68.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 60.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 53.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 51.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 50.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 49.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 38.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 38.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 36.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 36.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 32.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 31.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 31.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 30.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 29.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 29.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 25.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 23.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 23.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 22.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 22.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 22.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 21.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 20.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 20.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 20.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 20.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 19.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 18.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 18.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 17.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 17.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 17.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 17.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 17.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 16.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 16.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 16.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 16.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 16.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 16.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 16.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 15.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 15.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 15.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 15.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 15.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 15.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 15.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 14.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 14.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 14.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 13.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 13.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 13.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 13.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 13.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 13.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 13.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 13.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 13.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 12.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 12.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 12.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 12.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 12.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 12.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 12.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 12.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 12.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 12.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 12.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 12.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 11.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 11.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 11.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 11.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 11.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 11.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 11.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 10.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 10.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 10.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 10.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 10.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 10.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 10.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 10.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 10.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 10.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 10.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 9.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 9.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 9.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 9.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 9.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 9.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 9.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 9.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 9.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 9.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 9.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 9.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 9.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 9.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 9.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 9.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 9.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 8.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 8.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 8.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 8.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 8.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 8.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 8.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 8.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 8.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 8.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 8.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 8.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 8.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 8.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 8.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 8.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 8.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 8.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 8.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 7.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 7.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 7.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 7.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 7.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 7.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 7.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 7.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 7.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 7.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 7.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 7.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 7.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 7.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 6.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 6.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 6.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 6.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 6.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 6.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 6.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 6.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 6.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 6.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 6.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 6.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 6.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 6.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 6.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 6.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 6.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 6.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 6.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 6.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 6.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 6.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 6.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 6.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 6.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 6.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 6.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 5.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 5.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 5.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 5.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 5.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 5.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 5.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 5.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 5.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 5.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 5.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 5.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 5.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 4.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 4.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 4.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 4.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 4.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 4.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 4.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 4.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 4.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 4.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 4.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 4.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 3.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 3.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 3.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 3.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 3.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 2.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 0.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 31.0
Samples: 205

Max nTPM: 178.3
Min nTPM: 4.5
Std nTPM: 18.6
Median nTPM: 26.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 178.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 82.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 74.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 68.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 67.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 67.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 66.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 60.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 58.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 57.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 57.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 57.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 57.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 56.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 56.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 56.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 54.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 53.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 53.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 51.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 51.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 50.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 50.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 49.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 48.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 47.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 46.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 42.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 42.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 41.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 40.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 40.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 39.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 37.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 36.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 36.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 36.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 35.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 34.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 34.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 34.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 34.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 33.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 32.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 32.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 32.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 32.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 32.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 31.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 31.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 31.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 30.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 30.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 30.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 30.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 29.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 29.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 29.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 29.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 29.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 28.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 28.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 28.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 28.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 28.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 27.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 27.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 27.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 26.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 26.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 26.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 26.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 26.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 25.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 25.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 25.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 25.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 25.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 24.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 24.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 24.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 24.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 23.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 23.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 23.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 23.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 23.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 23.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 23.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 23.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 22.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 22.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 21.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 21.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 21.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 21.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 21.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 21.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 21.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 20.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 20.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 20.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 20.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 19.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 19.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 19.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 18.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 17.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 17.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 17.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 17.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 17.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 17.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 17.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 16.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 16.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 16.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 16.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 16.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 15.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 14.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 14.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 14.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 14.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 13.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 13.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 13.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 13.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 13.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 12.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 12.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 12.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 11.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 11.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 11.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 10.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 9.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 9.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 9.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 7.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 4.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

146.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 33.2
FF:10164-103B2 76 years, female 33.2
Nucleus accumbens
Scaled Tags Per Million: 65.9
FF:10037-101F1 23-56 years, mixed 65.9
Putamen
Scaled Tags Per Million: 33.3
FF:10176-103C5 60 years, female 33.3
Globus pallidus
Scaled Tags Per Million: 146.1
FF:10175-103C4 60 years, female 164.8
FF:10161-103A8 76 years, female 127.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.9
Pig sample Sample description nTPM
Caudate
nTPM: 1.9
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.5
Sample A Female 2.0
Sample B Female 2.0
Sample C Male 2.0
Sample D Male 1.5
Putamen
nTPM: 2.4
Samples: 4

Max nTPM: 3.1
Min nTPM: 1.8
Sample A Female 3.1
Sample B Female 1.8
Sample C Male 2.5
Sample D Male 2.2
Septum
nTPM: 2.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.2
Sample A Female 3.4
Sample B Female 2.8
Sample C Male 3.1
Sample D Male 2.2
Ventral pallidum
nTPM: 2.6
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 2.7
Sample C Male 2.7
Sample D Male 2.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.7
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.3
Sample A Male 7.9
Sample B Male 6.9
Sample C Female 9.8
Sample D Female 6.3
Septum
nTPM: 6.5
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 6.0
Sample C Female 7.1
Sample D Female 7.2
Ventral forebrain
nTPM: 6.8
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.9
Sample A Male 7.4
Sample B Male 7.1
Sample C Female 6.6
Sample D Female 5.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.1
75773700 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 11.1
75774629 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 11.0
Pallidum
Expression energy: 10.1
75773700 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 10.1
75774629 Antisense, RP_060530_01_A06, Mouse strain C57BL/6J (56 days, male) 9.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org