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ANP32B
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  • ANP32B
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:133.2 nTPM
HPA Brain:129.2 nTPM
GTEx:133.2 nTPM
FANTOM5:113.7 Scaled Tags Per Million
Pig:58.4 nTPM
Mouse:58.2 nTPM
Allen mouse:0.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.2
Sample id Sample description nTPM
Amygdala
nTPM: 101.1
2695 Female, age 67, right hemisphere 170.2
2814 Male, age 76, right hemisphere 97.4
2514 Male, age 75, right hemisphere 81.8
2517 Female, age 94, left hemisphere 80.2
1987 Female, age 91, left hemisphere 76.0
Basal amygdala
nTPM: 95.3
2827 Female, age 67, right hemisphere 214.4
2685 Female, age 94, left hemisphere 80.8
2609 Male, age 75, right hemisphere 76.5
1955 Male, age 76, both hemispheres 74.6
2110 Male, age 80, left hemisphere 68.8
2243 Female, age 91, right hemisphere 56.5
Central amygdala
nTPM: 116.2
2826 Female, age 94, left hemisphere 247.5
2515 Male, age 75, right hemisphere 99.4
1905 Male, age 76, both hemispheres 81.7
2701 Female, age 91, right hemisphere 78.5
2239 Male, age 80, left hemisphere 74.0
Corticomedial amygdala
nTPM: 71.7
2535 Female, age 67, right hemisphere 131.6
2240 Male, age 76, both hemispheres 80.0
2428 Male, age 75, right hemisphere 68.5
2829 Male, age 80, left hemisphere 56.7
2242 Female, age 91, right hemisphere 47.9
2429 Female, age 94, left hemisphere 45.2
Lateral amygdala
nTPM: 129.2
2830 Female, age 67, right hemisphere 282.9
2534 Female, age 94, left hemisphere 129.0
2516 Male, age 75, right hemisphere 114.2
2256 Male, age 80, left hemisphere 101.1
1883 Male, age 76, both hemispheres 78.7
2255 Female, age 91, right hemisphere 69.5

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 133.2
Samples: 152

Max nTPM: 315.5
Min nTPM: 47.4
Std nTPM: 69.2
Median nTPM: 111.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 315.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 315.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 312.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 311.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 304.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 293.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 291.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 289.9
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 285.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 285.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 274.1
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 272.1
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 271.8
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 261.3
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 259.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 248.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 237.7
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 237.1
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 235.9
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 235.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 223.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 218.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 214.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 207.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 200.7
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 198.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 193.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 185.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 185.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 177.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 176.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 175.9
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 175.8
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 175.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 173.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 172.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 170.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 163.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 160.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 159.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 159.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 158.8
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 157.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 155.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 154.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 153.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 151.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 151.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 149.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 149.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 144.6
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 143.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 142.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 139.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 138.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 138.8
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 137.9
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 136.0
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 135.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 134.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 134.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 132.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 132.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 130.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 126.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 126.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 124.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 124.2
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 123.2
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 120.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 119.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 116.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 115.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 113.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 112.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 111.1
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 111.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 110.9
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 107.0
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 105.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 105.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 105.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 103.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 100.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 100.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 100.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 99.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 99.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 98.6
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 98.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 96.9
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 96.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 95.4
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 94.9
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 93.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 93.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 92.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 91.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 90.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 90.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 88.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 87.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 87.7
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 86.7
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 86.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 85.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 84.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 84.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 83.3
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 82.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 82.0
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 81.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 81.3
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 79.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 79.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 79.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 79.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 78.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 77.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 77.3
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 76.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 76.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 76.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 75.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 75.3
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 74.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 73.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 72.9
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 71.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 71.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 70.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 70.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 70.3
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 70.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 70.2
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 68.1
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 67.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 64.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 63.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 63.6
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 62.7
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 62.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 61.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 60.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 54.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 51.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 50.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 50.9
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 50.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 49.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 47.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 47.4
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

113.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 113.7
FF:10151-102I7 76 years, female 113.7

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.4
Pig sample Sample description nTPM
Amygdala
nTPM: 58.4
Samples: 4

Max nTPM: 79.5
Min nTPM: 43.1
Sample A Female 55.3
Sample B Female 79.5
Sample C Male 55.6
Sample D Male 43.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 58.2
Samples: 4

Max nTPM: 60.3
Min nTPM: 54.6
Sample A Male 58.1
Sample B Male 54.6
Sample C Female 59.8
Sample D Female 60.3

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.4
71574416 Antisense, RP_050915_03_F09, Mouse strain C57BL/6J (56 days, male) 0.4

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