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RPL35
HPA
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  • RPL35
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:968.8 nTPM
FANTOM5:369.3 Scaled Tags Per Million
Pig:248.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006047
Glial cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

968.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 968.8
Samples: 246

Max nTPM: 3888.1
Min nTPM: 413.9
Std nTPM: 383.5
Median nTPM: 907.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3888.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2680.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2343.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1939.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1896.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1880.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1835.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1771.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1733.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1712.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1664.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1652.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1646.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1602.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1584.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1548.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1513.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1492.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1486.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1478.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1470.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1461.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1428.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1424.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1424.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1410.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1404.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1386.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1371.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1357.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1338.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1336.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1313.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1288.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1281.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1278.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1263.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1254.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1252.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1242.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1223.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1221.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1197.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1195.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1190.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1186.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1175.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1170.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1168.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1166.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1164.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1162.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1162.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1161.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1160.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1160.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1154.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1153.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1142.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1141.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1113.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1104.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1103.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1095.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1095.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1093.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1092.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1087.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1086.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1079.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1060.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1058.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1054.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1049.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1047.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1040.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1039.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1038.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1035.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1027.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1020.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1019.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1019.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1018.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1012.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1011.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1009.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1006.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1002.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 994.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 988.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 987.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 985.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 985.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 985.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 983.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 972.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 967.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 964.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 964.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 963.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 962.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 962.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 958.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 958.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 956.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 952.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 952.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 952.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 948.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 935.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 934.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 933.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 929.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 926.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 925.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 923.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 922.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 918.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 915.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 914.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 913.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 908.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 906.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 901.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 901.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 896.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 886.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 886.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 885.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 879.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 876.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 867.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 866.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 864.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 862.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 858.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 856.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 854.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 853.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 848.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 846.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 842.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 842.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 837.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 836.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 829.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 829.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 828.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 828.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 826.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 822.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 822.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 821.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 815.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 811.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 811.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 811.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 808.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 807.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 798.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 796.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 794.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 793.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 791.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 789.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 789.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 783.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 781.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 778.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 777.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 776.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 776.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 773.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 773.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 769.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 758.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 757.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 750.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 750.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 741.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 740.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 735.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 720.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 717.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 715.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 712.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 712.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 712.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 711.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 711.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 707.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 707.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 696.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 694.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 693.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 689.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 680.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 675.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 673.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 671.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 667.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 667.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 666.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 663.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 661.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 651.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 635.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 634.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 627.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 627.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 622.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 621.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 615.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 614.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 614.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 603.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 600.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 599.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 596.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 590.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 589.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 582.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 573.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 568.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 567.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 565.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 564.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 562.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 561.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 561.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 554.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 552.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 549.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 549.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 542.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 539.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 531.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 529.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 511.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 506.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 463.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 456.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 442.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 419.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 413.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

369.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 369.3
FF:10164-103B2 76 years, female 369.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.3
Pig sample Sample description nTPM
Caudate
nTPM: 248.3
Samples: 4

Max nTPM: 272.5
Min nTPM: 208.4
Sample A Female 248.1
Sample B Female 272.5
Sample C Male 264.3
Sample D Male 208.4

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