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RPL35
HPA
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1344.2 nTPM
HPA:747.1 nTPM
GTEx:1344.2 nTPM
FANTOM5:605.3 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006047
Glandular cells Medium


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

747.1
overview
Male, age 65
Small intestine sample 232
nTPM: 858.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 737.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 706
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 686.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1344.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1344.2
Samples: 187

Max nTPM: 3151.1
Min nTPM: 581.3
Std nTPM: 453.9
Median nTPM: 1271.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3151.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3130.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2661.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2593.5
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2557.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2410.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2310.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2305.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2249.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2179.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2173.4
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2133.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2115.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2093.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2033.6
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2016.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1987.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1983.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1914.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1903.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1898.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1866.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1862.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1797.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1743.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1740.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1723.6
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1720.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1720.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1719.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1715.7
GTEX-1192X-2526-SM-59868 50-59 years, male 1711.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 1699.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1694.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1669.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1666.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1661.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1649.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1644.2
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1641.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1630.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1613.6
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1596.4
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1591.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1574.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1556.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1556.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1553.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1548.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1544.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1521.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1504.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1501.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1496.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1491.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1489.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1489.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1488.2
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1481.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1479.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1461.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1452.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1452.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1451.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1450.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1446.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1442.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1436.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1434.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1433.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1423.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1423.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1421.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1418.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1414.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1399.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 1390.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1383.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1381.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1381.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1379.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1368.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1368.2
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1363.7
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1342.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1332.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1323.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1315.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1313.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1305.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1303.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1299.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1297.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1271.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1269.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1265.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1259.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1253.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1252.6
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1250.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1248.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1248.1
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1236.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1229.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1229.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1225.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1220.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1219.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1218.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1216.9
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1216.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1213.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1192.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1186.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1181.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1171.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1170.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1163.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1156.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1128.6
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1128.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1119.5
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1118.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1114.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1112.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1102.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1102.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1100.4
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1096.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1092.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1086.5
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1067.9
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1065.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1058.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1051.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1035.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1027.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1024.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1017.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1009.9
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1000.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 997.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 993.7
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 988.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 984.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 980.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 977.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 971.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 971.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 968.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 967.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 966.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 964.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 958.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 952.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 941.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 930.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 885.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 877.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 874.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 872.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 868.5
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 858.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 854.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 850.6
GTEX-144GM-1026-SM-79OKU 20-29 years, male 841.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 833.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 828.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 814.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 812.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 812.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 806.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 791.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 791.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 789.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 772.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 770.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 762.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 750.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 745.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 685.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 683.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 679.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 665.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 663.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 629.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 581.3
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

605.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 605.3
FF:10024-101D6 15,40,85 years, mixed 605.3

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