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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:68.6 nTPM
HPA Brain:33.9 nTPM
GTEx:68.6 nTPM
FANTOM5:86.3 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:88.4 nTPM
Allen mouse:13.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA022013
Glial cells Low
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 28.1
1857 Female, age 85, left hemisphere 32.6
2846 Female, age 79, unknown 32.2
1781 Male, age 74, unknown 31.1
1854 Male, age 80, left hemisphere 29.7
2481 Female, age 94, left hemisphere 28.9
2290 Female, age 72, unknown 28.3
2288 Male, age 75, left hemisphere 22.3
2289 Male, age 61, right hemisphere 19.5
Globus pallidus, externus
nTPM: 20.7
2772 Female, age 79, unknown 25.7
2395 Male, age 75, both hemispheres 24.9
2567 Female, age 72, unknown 19.8
1996 Male, age 80, right hemisphere 16.5
2646 Male, age 61, right hemisphere 16.4
Globus pallidus, internus
nTPM: 18.9
2483 Female, age 94, right hemisphere 26.2
2287 Male, age 75, right hemisphere 22.9
1818 Male, age 74, unknown 21.0
2566 Female, age 72, unknown 18.4
2778 Female, age 91, both hemispheres 16.6
2037 Male, age 80, right hemisphere 15.2
2111 Female, age 85, right hemisphere 12.2
Nucleus accumbens
nTPM: 29.6
1856 Female, age 91, right hemisphere 43.6
1783 Male, age 74, unknown 35.2
2824 Male, age 61, right hemisphere 31.7
1806 Female, age 85, left hemisphere 31.1
2698 Female, age 72, unknown 29.1
2286 Male, age 75, left hemisphere 25.8
2391 Female, age 94, left hemisphere 23.7
2732 Male, age 80, right hemisphere 16.7
Nucleus basalis of Meynert
nTPM: 23.9
2821 Male, age 75, both hemispheres 27.3
2393 Male, age 80, right hemisphere 26.1
2484 Female, age 94, left hemisphere 24.9
2569 Male, age 61, both hemispheres 17.5
Nucleus of the diagonal band
nTPM: 33.9
1812 Female, age 91, both hemispheres 42.5
2775 Male, age 80, right hemisphere 40.5
2029 Male, age 61, right hemisphere 33.2
2195 Female, age 85, both hemispheres 31.1
1979 Male, age 74, unknown 22.1
Putamen
nTPM: 28.0
1838 Male, age 80, right hemisphere 35.4
2466 Female, age 79, unknown 34.4
1829 Male, age 74, unknown 30.8
1937 Female, age 91, right hemisphere 30.7
2482 Female, age 94, left hemisphere 24.8
2647 Male, age 75, left hemisphere 22.1
2489 Female, age 72, unknown 17.8
Septal nuclei
nTPM: 28.2
2031 Female, age 72, unknown 41.2
1960 Male, age 74, unknown 37.9
2009 Female, age 91, both hemispheres 32.8
2629 Female, age 94, right hemisphere 26.2
2059 Female, age 85, both hemispheres 22.0
2394 Male, age 61, left hemisphere 18.6
2199 Male, age 80, right hemisphere 18.5
Stria terminalis, bed nucleus
nTPM: 27.2
1974 Female, age 91, both hemispheres 35.9
2486 Female, age 94, both hemispheres 26.9
2201 Male, age 74, unknown 18.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 58.6
Samples: 246

Max nTPM: 138.7
Min nTPM: 23.8
Std nTPM: 20.7
Median nTPM: 55.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 138.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 132.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 114.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 108.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 104.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 103.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 101.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 100.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 99.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 99.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 98.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 98.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 96.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 95.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 94.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 94.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 93.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 93.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 91.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 91.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 88.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 85.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 85.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 82.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 82.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 81.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 81.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 81.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 80.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 79.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 77.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 76.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 76.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 76.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 76.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 76.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 75.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 75.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 74.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 74.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 73.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 71.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 70.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 70.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 69.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 69.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 68.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 68.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 66.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 65.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 65.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 63.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 63.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 62.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 62.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 62.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 62.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 61.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 60.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 60.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 60.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 59.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 58.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 58.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 58.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 57.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 57.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 57.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 56.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 56.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 56.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 55.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 55.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 55.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 55.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 54.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 54.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 54.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 53.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 53.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 52.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 52.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 52.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 51.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 51.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 51.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 51.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 49.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 49.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 49.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 48.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 48.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 48.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 47.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 47.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 46.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 46.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 46.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 46.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 45.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 45.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 44.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 44.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 43.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 43.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 43.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 42.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 42.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 41.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 41.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 41.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 41.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 41.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 40.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 40.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 40.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 39.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 39.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 39.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 38.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 38.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 38.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 38.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 38.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 37.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 37.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 37.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 37.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 36.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 35.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 34.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 34.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 33.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 32.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 32.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 32.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 31.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 31.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 31.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 26.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 25.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 68.6
Samples: 246

Max nTPM: 116.1
Min nTPM: 28.2
Std nTPM: 19.1
Median nTPM: 69.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 116.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 115.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 114.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 112.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 111.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 109.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 108.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 107.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 104.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 103.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 102.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 101.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 101.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 100.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 99.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 99.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 99.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 98.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 97.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 95.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 95.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 95.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 94.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 94.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 94.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 93.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 92.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 91.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 90.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 90.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 90.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 89.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 89.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 88.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 88.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 88.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 87.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 87.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 87.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 86.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 86.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 86.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 86.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 85.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 85.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 85.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 84.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 84.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 84.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 84.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 83.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 83.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 83.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 83.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 82.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 82.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 82.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 82.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 81.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 81.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 81.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 81.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 81.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 80.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 79.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 79.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 79.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 79.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 78.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 78.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 78.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 78.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 78.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 78.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 77.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 76.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 76.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 76.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 75.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 75.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 75.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 75.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 75.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 75.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 74.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 74.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 74.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 74.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 74.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 74.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 74.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 74.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 72.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 72.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 72.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 72.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 71.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 71.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 71.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 71.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 71.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 71.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 71.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 71.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 70.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 70.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 70.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 70.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 69.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 69.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 69.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 68.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 68.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 68.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 68.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 67.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 66.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 66.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 66.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 66.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 66.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 65.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 65.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 65.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 65.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 65.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 65.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 65.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 64.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 64.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 64.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 63.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 62.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 62.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 61.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 61.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 61.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 61.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 61.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 61.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 61.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 60.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 60.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 60.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 60.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 60.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 59.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 58.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 58.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 57.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 57.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 57.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 57.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 57.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 56.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 56.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 56.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 55.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 55.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 55.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 54.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 53.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 52.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 52.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 51.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 50.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 50.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 49.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 49.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 49.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 48.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 48.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 47.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 47.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 46.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 46.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 46.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 45.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 45.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 45.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 45.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 45.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 45.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 43.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 43.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 42.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 42.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 42.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 42.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 41.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 40.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 40.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 39.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 38.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 37.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 36.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 36.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 34.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 34.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 34.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 33.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 32.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 31.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 28.2
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Brain - Putamen (basal ganglia)
Average nTPM: 61.8
Samples: 205

Max nTPM: 135.3
Min nTPM: 32.0
Std nTPM: 19.3
Median nTPM: 57.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 135.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 123.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 116.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 115.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 112.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 105.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 105.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 104.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 104.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 103.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 101.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 98.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 96.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 95.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 94.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 91.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 89.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 89.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 89.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 88.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 88.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 88.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 87.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 86.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 85.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 84.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 84.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 84.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 83.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 83.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 83.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 83.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 81.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 81.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 80.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 80.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 80.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 79.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 79.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 77.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 76.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 73.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 72.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 72.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 71.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 71.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 70.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 70.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 70.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 69.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 69.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 69.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 68.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 67.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 67.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 66.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 66.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 65.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 65.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 64.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 63.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 62.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 62.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 61.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 61.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 61.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 61.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 60.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 60.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 60.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 60.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 60.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 59.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 59.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 59.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 59.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 58.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 58.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 58.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 58.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 58.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 57.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 57.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 56.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 56.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 56.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 56.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 56.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 56.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 56.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 55.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 55.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 54.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 54.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 54.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 54.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 54.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 53.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 53.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 53.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 52.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 52.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 51.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 51.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 51.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 50.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 50.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 49.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 49.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 49.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 49.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 48.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 48.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 48.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 47.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 47.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 47.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 47.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 46.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 46.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 46.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 46.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 45.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 45.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 44.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 44.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 43.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 43.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 43.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 42.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 42.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 42.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 42.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 41.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 41.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 41.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 40.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 40.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 40.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 39.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 39.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 39.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 38.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 38.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 37.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 36.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 36.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 34.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 32.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 76.9
FF:10164-103B2 76 years, female 76.9
Nucleus accumbens
Scaled Tags Per Million: 64.7
FF:10037-101F1 23-56 years, mixed 64.7
Putamen
Scaled Tags Per Million: 86.3
FF:10176-103C5 60 years, female 86.3
Globus pallidus
Scaled Tags Per Million: 49.1
FF:10175-103C4 60 years, female 61.9
FF:10161-103A8 76 years, female 36.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.7
Pig sample Sample description nTPM
Caudate
nTPM: 21.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 19.8
Sample A Female 19.8
Sample B Female 21.2
Sample C Male 25.5
Sample D Male 20.5
Putamen
nTPM: 22.7
Samples: 4

Max nTPM: 32.9
Min nTPM: 14.2
Sample A Female 14.2
Sample B Female 22.4
Sample C Male 32.9
Sample D Male 21.4
Septum
nTPM: 19.3
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.3
Sample A Female 21.1
Sample B Female 18.4
Sample C Male 15.3
Sample D Male 22.4
Ventral pallidum
nTPM: 18.4
Samples: 4

Max nTPM: 22.5
Min nTPM: 14.9
Sample A Female 22.5
Sample B Female 20.1
Sample C Male 14.9
Sample D Male 16.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 86.4
Samples: 4

Max nTPM: 89.8
Min nTPM: 77.6
Sample A Male 77.6
Sample B Male 88.7
Sample C Female 89.8
Sample D Female 89.5
Septum
nTPM: 88.4
Samples: 4

Max nTPM: 96.4
Min nTPM: 82.4
Sample A Male 82.4
Sample B Male 96.4
Sample C Female 88.6
Sample D Female 86.1
Ventral forebrain
nTPM: 82.4
Samples: 4

Max nTPM: 88.8
Min nTPM: 77.7
Sample A Male 83.3
Sample B Male 79.9
Sample C Female 88.8
Sample D Female 77.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.1
70543029 Antisense, RP_050329_01_G03, Mouse strain C57BL/6J (56 days, male) 13.1
Pallidum
Expression energy: 11.0
70543029 Antisense, RP_050329_01_G03, Mouse strain C57BL/6J (56 days, male) 11.0

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