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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:72.9 nTPM
HPA Brain:84.7 nTPM
GTEx:72.9 nTPM
FANTOM5:106.9 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:47.2 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA022971Antibody HPA078575
Glial cells LowMedium
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 54.5
2481 Female, age 94, left hemisphere 63.1
2288 Male, age 75, left hemisphere 63.0
2846 Female, age 79, unknown 56.7
2290 Female, age 72, unknown 53.9
1854 Male, age 80, left hemisphere 53.7
1857 Female, age 85, left hemisphere 50.3
1781 Male, age 74, unknown 49.8
2289 Male, age 61, right hemisphere 45.6
Globus pallidus, externus
nTPM: 84.7
1996 Male, age 80, right hemisphere 105.2
2772 Female, age 79, unknown 98.7
2646 Male, age 61, right hemisphere 81.2
2395 Male, age 75, both hemispheres 72.5
2567 Female, age 72, unknown 65.8
Globus pallidus, internus
nTPM: 82.3
2287 Male, age 75, right hemisphere 91.1
2778 Female, age 91, both hemispheres 89.2
1818 Male, age 74, unknown 86.2
2111 Female, age 85, right hemisphere 81.1
2037 Male, age 80, right hemisphere 80.5
2483 Female, age 94, right hemisphere 79.9
2566 Female, age 72, unknown 68.2
Nucleus accumbens
nTPM: 55.2
2286 Male, age 75, left hemisphere 66.4
2698 Female, age 72, unknown 62.3
2391 Female, age 94, left hemisphere 61.3
1806 Female, age 85, left hemisphere 53.3
2732 Male, age 80, right hemisphere 53.1
1783 Male, age 74, unknown 51.2
1856 Female, age 91, right hemisphere 47.7
2824 Male, age 61, right hemisphere 46.1
Nucleus basalis of Meynert
nTPM: 62.4
2569 Male, age 61, both hemispheres 79.9
2821 Male, age 75, both hemispheres 61.6
2484 Female, age 94, left hemisphere 57.9
2393 Male, age 80, right hemisphere 50.1
Nucleus of the diagonal band
nTPM: 47.9
1812 Female, age 91, both hemispheres 52.9
2775 Male, age 80, right hemisphere 50.4
2029 Male, age 61, right hemisphere 48.1
1979 Male, age 74, unknown 47.0
2195 Female, age 85, both hemispheres 41.3
Putamen
nTPM: 53.5
2482 Female, age 94, left hemisphere 66.3
2647 Male, age 75, left hemisphere 59.3
1937 Female, age 91, right hemisphere 53.7
2466 Female, age 79, unknown 52.6
1829 Male, age 74, unknown 50.7
2489 Female, age 72, unknown 48.9
1838 Male, age 80, right hemisphere 42.8
Septal nuclei
nTPM: 48.6
2199 Male, age 80, right hemisphere 53.6
2394 Male, age 61, left hemisphere 50.2
2031 Female, age 72, unknown 49.6
1960 Male, age 74, unknown 49.5
2059 Female, age 85, both hemispheres 49.5
2009 Female, age 91, both hemispheres 45.7
2629 Female, age 94, right hemisphere 41.8
Stria terminalis, bed nucleus
nTPM: 44.5
1974 Female, age 91, both hemispheres 51.4
2201 Male, age 74, unknown 44.5
2486 Female, age 94, both hemispheres 37.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.1
Samples: 246

Max nTPM: 129.8
Min nTPM: 34.2
Std nTPM: 13.5
Median nTPM: 62.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 129.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 127.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 106.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 99.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 97.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 94.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 90.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 89.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 89.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 88.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 88.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 87.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 86.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 85.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 84.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 83.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 83.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 83.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 81.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 81.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 81.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 79.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 79.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 79.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 78.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 78.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 78.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 78.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 78.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 78.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 78.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 77.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 77.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 77.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 76.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 75.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 74.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 73.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 73.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 72.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 72.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 72.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 72.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 71.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 71.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 71.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 70.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 70.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 70.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 70.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 69.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 69.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 69.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 68.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 68.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 68.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 68.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 68.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 68.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 67.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 67.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 67.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 67.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 66.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 66.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 66.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 66.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 66.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 65.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 65.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 65.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 65.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 64.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 64.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 64.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 63.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 63.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 62.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 61.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 61.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 61.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 61.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 60.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 60.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 60.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 60.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 60.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 59.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 59.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 59.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 59.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 59.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 58.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 58.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 58.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 58.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 58.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 57.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 56.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 56.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 56.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 56.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 55.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 55.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 54.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 54.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 53.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 53.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 53.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 53.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 53.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 53.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 52.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 52.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 51.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 51.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 51.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 50.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 49.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 49.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 49.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 48.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 47.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 46.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 45.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 44.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 42.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 41.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 40.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 38.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 34.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 60.8
Samples: 246

Max nTPM: 117.7
Min nTPM: 36.3
Std nTPM: 13.0
Median nTPM: 58.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 117.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 112.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 96.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 95.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 94.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 92.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 91.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 90.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 90.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 88.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 87.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 86.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 83.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 83.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 83.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 82.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 81.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 80.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 80.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 80.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 80.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 79.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 79.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 79.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 79.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 79.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 79.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 78.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 77.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 77.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 76.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 76.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 76.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 76.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 75.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 75.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 74.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 74.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 74.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 73.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 71.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 71.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 71.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 71.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 70.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 70.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 70.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 70.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 70.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 70.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 69.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 69.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 69.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 68.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 68.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 68.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 67.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 67.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 67.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 67.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 67.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 66.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 66.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 66.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 66.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 65.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 65.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 65.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 65.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 64.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 64.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 64.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 64.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 64.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 63.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 63.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 63.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 62.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 62.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 62.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 62.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 61.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 61.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 61.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 60.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 60.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 60.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 60.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 60.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 60.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 59.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 59.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 59.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 58.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 58.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 58.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 58.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 58.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 58.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 58.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 58.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 57.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 57.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 57.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 57.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 57.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 57.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 57.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 56.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 56.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 56.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 56.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 56.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 55.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 55.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 55.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 55.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 55.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 55.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 55.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 55.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 55.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 55.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 54.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 54.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 54.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 54.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 54.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 54.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 54.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 54.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 53.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 53.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 53.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 52.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 52.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 52.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 52.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 52.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 52.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 52.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 51.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 51.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 51.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 51.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 51.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 51.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 51.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 50.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 50.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 50.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 50.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 50.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 50.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 50.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 50.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 49.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 49.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 49.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 49.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 48.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 48.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 48.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 48.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 47.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 47.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 46.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 46.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 46.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 46.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 46.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 46.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 45.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 45.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 45.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 44.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 44.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 43.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 43.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 43.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 41.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 41.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 41.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 38.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 36.3
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Brain - Putamen (basal ganglia)
Average nTPM: 72.9
Samples: 205

Max nTPM: 154.1
Min nTPM: 37.2
Std nTPM: 14.8
Median nTPM: 70.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 154.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 125.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 116.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 110.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 107.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 102.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 101.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 99.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 99.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 99.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 98.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 96.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 95.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 94.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 92.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 91.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 91.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 90.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 90.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 89.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 88.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 88.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 88.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 88.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 88.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 87.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 87.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 87.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 87.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 86.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 86.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 86.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 86.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 85.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 85.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 84.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 84.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 84.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 84.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 84.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 84.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 83.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 83.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 83.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 82.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 82.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 82.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 82.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 81.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 81.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 81.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 81.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 81.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 80.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 80.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 80.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 80.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 79.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 79.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 79.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 79.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 78.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 78.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 78.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 78.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 78.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 77.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 77.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 77.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 77.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 77.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 76.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 76.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 76.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 76.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 75.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 75.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 75.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 75.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 75.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 75.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 73.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 73.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 73.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 73.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 72.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 72.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 72.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 72.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 71.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 71.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 71.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 71.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 71.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 70.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 70.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 70.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 70.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 70.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 70.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 70.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 69.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 69.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 69.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 69.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 69.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 69.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 69.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 69.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 69.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 69.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 68.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 68.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 68.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 68.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 68.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 68.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 68.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 68.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 67.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 67.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 67.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 66.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 66.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 66.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 66.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 66.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 65.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 65.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 65.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 64.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 64.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 63.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 63.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 63.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 62.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 62.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 62.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 61.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 61.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 60.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 60.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 60.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 60.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 59.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 59.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 59.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 59.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 59.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 59.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 59.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 58.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 58.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 57.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 57.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 56.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 55.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 55.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 55.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 55.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 54.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 54.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 53.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 52.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 51.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 51.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 51.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 51.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 50.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 48.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 48.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 46.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 37.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

106.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.5
FF:10164-103B2 76 years, female 72.5
Nucleus accumbens
Scaled Tags Per Million: 84.9
FF:10037-101F1 23-56 years, mixed 84.9
Putamen
Scaled Tags Per Million: 67.7
FF:10176-103C5 60 years, female 67.7
Globus pallidus
Scaled Tags Per Million: 106.9
FF:10175-103C4 60 years, female 113.7
FF:10161-103A8 76 years, female 100.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.9
Pig sample Sample description nTPM
Caudate
nTPM: 26.4
Samples: 4

Max nTPM: 28.4
Min nTPM: 22.4
Sample A Female 22.4
Sample B Female 28.4
Sample C Male 28.4
Sample D Male 26.2
Putamen
nTPM: 30.7
Samples: 4

Max nTPM: 36.5
Min nTPM: 26.3
Sample A Female 36.5
Sample B Female 26.3
Sample C Male 29.7
Sample D Male 30.4
Septum
nTPM: 30.9
Samples: 4

Max nTPM: 32.2
Min nTPM: 28.8
Sample A Female 28.8
Sample B Female 32.2
Sample C Male 31.6
Sample D Male 31.0
Ventral pallidum
nTPM: 30.1
Samples: 4

Max nTPM: 35.8
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 35.8
Sample C Male 33.0
Sample D Male 29.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 36.9
Samples: 4

Max nTPM: 40.9
Min nTPM: 31.7
Sample A Male 39.0
Sample B Male 40.9
Sample C Female 31.7
Sample D Female 36.0
Septum
nTPM: 47.2
Samples: 4

Max nTPM: 50.5
Min nTPM: 42.8
Sample A Male 46.2
Sample B Male 49.2
Sample C Female 50.5
Sample D Female 42.8
Ventral forebrain
nTPM: 35.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 30.0
Sample A Male 35.1
Sample B Male 38.5
Sample C Female 38.2
Sample D Female 30.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68269712 Antisense, RP_041129_02_B01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68269712 Antisense, RP_041129_02_B01, Mouse strain C57BL/6J (56 days, male) 0.0

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