PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:72.0 nTPM
FANTOM5:96.3 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:63.0 nTPM
Allen mouse:0.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 72.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 61.8
2188 Female, age 91, both hemispheres 68.8
2090 Male, age 80, both hemispheres 66.5
2301 Female, age 85, both hemispheres 55.9
1984 Male, age 76, both hemispheres 55.7
Area postrema
nTPM: 64.8
2306 Male, age 80, both hemispheres 76.8
2799 Male, age 61, both hemispheres 67.6
2054 Male, age 76, both hemispheres 50.1
Dorsal cochlear nucleus
nTPM: 61.9
2378 Male, age 80, both hemispheres 63.4
2058 Male, age 76, both hemispheres 61.8
2802 Male, age 74, right hemisphere 61.5
2370 Male, age 61, both hemispheres 61.4
2187 Female, age 91, both hemispheres 61.2
Dorsal medullary reticular nucleus
nTPM: 62.7
2040 Female, age 85, both hemispheres 75.9
2088 Male, age 76, both hemispheres 57.8
2373 Male, age 61, both hemispheres 54.3
Dorsal motor vagal complex
nTPM: 59.4
2000 Male, age 74, unknown 69.3
2185 Male, age 76, both hemispheres 68.2
2797 Male, age 61, both hemispheres 66.0
2643 Male, age 74, both hemispheres 64.2
2133 Female, age 91, both hemispheres 61.4
2813 Female, age 72, unknown 52.1
2844 Male, age 55, unknown 51.6
2807 Female, age 85, both hemispheres 42.5
Dorsal tegmental nucleus
nTPM: 63.6
2083 Male, age 80, both hemispheres 72.6
2358 Male, age 61, both hemispheres 69.4
2326 Male, age 74, both hemispheres 61.0
1936 Male, age 76, left hemisphere 51.5
Dorsolateral tegmental area
nTPM: 59.7
2337 Male, age 61, both hemispheres 66.7
2751 Female, age 85, both hemispheres 65.7
2654 Male, age 80, both hemispheres 63.7
2360 Male, age 74, both hemispheres 53.0
2141 Male, age 76, both hemispheres 49.4
Gigantocellular reticular nuclei, medullary
nTPM: 63.6
1876 Female, age 85, both hemispheres 74.8
2314 Male, age 61, both hemispheres 70.1
2022 Male, age 76, right hemisphere 66.7
2387 Female, age 91, both hemispheres 63.9
2310 Male, age 80, both hemispheres 56.0
2462 Male, age 74, both hemispheres 50.0
Gigantocellular reticular nuclei, pars
nTPM: 57.9
2084 Female, age 85, both hemispheres 63.8
2168 Male, age 76, both hemispheres 60.6
2336 Male, age 61, both hemispheres 59.5
2706 Male, age 80, both hemispheres 55.2
2330 Male, age 80, both hemispheres 50.1
Inferior olive
nTPM: 69.6
2563 Male, age 74, both hemispheres 83.3
2628 Female, age 91, both hemispheres 69.9
2178 Male, age 61, both hemispheres 68.4
2085 Female, age 85, both hemispheres 64.9
2379 Male, age 80, both hemispheres 61.5
Kolliker-Fuse nucleus
nTPM: 66.0
2793 Female, age 91, left hemisphere 71.2
2163 Male, age 80, both hemispheres 68.0
2315 Male, age 76, right hemisphere 58.7
Lateral lemniscal nuclei
nTPM: 57.6
2169 Male, age 76, both hemispheres 66.4
2320 Female, age 91, left hemisphere 60.2
2746 Female, age 85, left hemisphere 59.6
2453 Male, age 74, right hemisphere 51.8
2036 Male, age 80, both hemispheres 50.0
Lateral medullary reticular nucleus
nTPM: 68.5
2852 Male, age 80, both hemispheres 76.4
2044 Male, age 76, both hemispheres 72.7
2305 Male, age 74, both hemispheres 68.8
2804 Female, age 91, both hemispheres 67.8
2190 Female, age 85, both hemispheres 66.5
2374 Male, age 61, both hemispheres 58.7
Lateral parabrachial nucleus
nTPM: 65.8
2792 Male, age 76, both hemispheres 73.8
2013 Male, age 80, both hemispheres 68.5
2139 Female, age 85, right hemisphere 62.7
2790 Male, age 61, both hemispheres 58.1
Lateral vestibular nucleus
nTPM: 61.9
2184 Male, age 76, both hemispheres 65.7
2311 Male, age 80, both hemispheres 58.1
Locus coeruleus
nTPM: 56.7
2014 Male, age 55, unknown 65.7
2317 Female, age 72, unknown 59.0
2123 Female, age 91, both hemispheres 58.1
2720 Male, age 74, both hemispheres 57.4
1980 Male, age 76, both hemispheres 52.8
2788 Male, age 74, unknown 52.1
2162 Male, age 80, both hemispheres 51.5
Medial olivary nucleus
nTPM: 72.0
1943 Male, age 61, both hemispheres 80.0
2138 Female, age 91, both hemispheres 71.3
2851 Male, age 80, both hemispheres 69.9
1962 Male, age 76, both hemispheres 66.7
Medial parabrachial nucleus
nTPM: 62.9
2170 Female, age 91, both hemispheres 70.9
2463 Female, age 85, right hemisphere 62.9
2156 Male, age 61, both hemispheres 62.5
2854 Male, age 80, both hemispheres 62.3
2786 Male, age 76, both hemispheres 56.1
Medial periolivary nuclei
nTPM: 58.1
2063 Male, age 76, both hemispheres 67.7
2791 Male, age 74, right hemisphere 59.1
2081 Male, age 80, both hemispheres 58.8
2171 Female, age 85, both hemispheres 54.3
2458 Female, age 91, both hemispheres 50.6
Medial vestibular nucleus
nTPM: 62.0
2803 Female, age 91, both hemispheres 69.4
2801 Male, age 74, both hemispheres 65.1
2093 Male, age 80, both hemispheres 62.7
2624 Male, age 61, both hemispheres 62.7
2743 Female, age 85, both hemispheres 56.9
2134 Male, age 76, both hemispheres 55.0
Motor facial nucleus
nTPM: 58.9
2062 Male, age 76, both hemispheres 67.0
2697 Female, age 85, both hemispheres 62.2
2365 Male, age 74, right hemisphere 60.6
2126 Male, age 61, both hemispheres 57.3
2795 Female, age 91, both hemispheres 56.0
2327 Male, age 80, both hemispheres 50.2
Motor hypoglossal nucleus
nTPM: 57.0
2125 Female, age 91, both hemispheres 67.5
2132 Female, age 85, both hemispheres 66.1
2182 Male, age 80, both hemispheres 62.7
2461 Male, age 61, both hemispheres 47.2
2277 Male, age 76, both hemispheres 41.6
Motor trigeminal nucleus
nTPM: 57.0
2560 Male, age 74, both hemispheres 60.8
2309 Male, age 76, both hemispheres 57.9
2335 Male, age 61, both hemispheres 57.6
2321 Female, age 91, both hemispheres 56.9
2079 Male, age 80, both hemispheres 52.0
Nuclei of the trapezoid body
nTPM: 58.6
1983 Male, age 76, both hemispheres 72.6
2166 Male, age 80, both hemispheres 59.8
2159 Male, age 61, both hemispheres 56.3
2368 Female, age 91, both hemispheres 52.3
2735 Female, age 85, both hemispheres 52.1
Nucleus ambiguus
nTPM: 67.4
2071 Male, age 76, both hemispheres 73.7
2096 Female, age 85, both hemispheres 61.2
Nucleus cuneatus
nTPM: 63.2
2380 Male, age 80, both hemispheres 74.2
2564 Male, age 74, both hemispheres 70.7
2381 Male, age 80, both hemispheres 65.8
2100 Male, age 76, both hemispheres 64.0
2131 Male, age 76, both hemispheres 62.9
2808 Female, age 85, both hemispheres 61.0
2562 Male, age 61, both hemispheres 59.9
2376 Male, age 61, both hemispheres 56.9
2805 Female, age 91, both hemispheres 53.3
Nucleus gracilis
nTPM: 66.6
2382 Male, age 80, both hemispheres 75.4
2627 Male, age 74, both hemispheres 69.1
2299 Female, age 85, both hemispheres 55.3
Nucleus raphe magnus
nTPM: 59.4
2051 Male, age 76, both hemispheres 72.1
2160 Male, age 61, both hemispheres 62.6
2328 Male, age 80, both hemispheres 59.3
2455 Male, age 74, both hemispheres 57.4
2459 Female, age 91, both hemispheres 53.5
2172 Female, age 85, both hemispheres 51.3
Nucleus raphe obscurus
nTPM: 67.8
2845 Female, age 85, midline 73.9
2800 Male, age 61, midline 68.3
2142 Male, age 76, midline 61.2
Nucleus raphe pallidus
nTPM: 70.6
1924 Male, age 61, midline 82.6
2183 Male, age 80, midline 71.2
2145 Male, age 76, midline 57.9
Nucleus tractus solitarii
nTPM: 47.7
2656 Male, age 76, both hemispheres 52.0
2144 Female, age 91, right hemisphere 48.1
2191 Female, age 85, both hemispheres 47.2
2307 Male, age 80, both hemispheres 43.4
Paramedian reticular nucleus
nTPM: 63.6
2050 Female, age 85, both hemispheres 69.0
2057 Male, age 80, both hemispheres 68.3
2052 Male, age 76, both hemispheres 58.9
2313 Male, age 61, both hemispheres 58.2
Parvicellular reticular nuclei
nTPM: 60.1
2119 Male, age 80, both hemispheres 65.4
2095 Male, age 76, both hemispheres 63.6
2558 Male, age 74, both hemispheres 51.2
Parvicellular reticular nuclei, medullary
nTPM: 61.9
2189 Female, age 91, both hemispheres 67.9
2091 Female, age 85, both hemispheres 63.8
2181 Male, age 80, left hemisphere 54.1
Pedunculopontine tegmental nucleus
nTPM: 60.3
2334 Male, age 80, both hemispheres 62.2
1921 Female, age 85, both hemispheres 60.1
2338 Male, age 61, both hemispheres 58.6
Peritrigeminal nucleus
nTPM: 68.2
2067 Female, age 85, both hemispheres 76.4
2136 Male, age 76, both hemispheres 66.0
2179 Male, age 61, both hemispheres 62.3
Pontine nuclei
nTPM: 67.4
1863 Male, age 55, unknown 82.7
1968 Male, age 76, left hemisphere 72.5
2787 Female, age 85, both hemispheres 71.3
2454 Male, age 74, left hemisphere 69.5
2319 Female, age 91, both hemispheres 66.9
2109 Female, age 72, unknown 63.8
2115 Male, age 80, left hemisphere 57.8
2727 Male, age 61, right hemisphere 54.9
Pontine raphe nucleus
nTPM: 58.9
2853 Male, age 76, midline 59.5
2122 Female, age 85, midline 58.2
Posteroventral cochlear nucleus
nTPM: 66.1
2070 Male, age 76, both hemispheres 69.7
2341 Male, age 80, both hemispheres 69.0
2135 Female, age 91, both hemispheres 66.6
2371 Male, age 61, both hemispheres 63.6
2752 Female, age 85, both hemispheres 61.5
Prepositus hypoglossal nucleus
nTPM: 60.2
2855 Female, age 85, right hemisphere 63.6
2086 Male, age 80, both hemispheres 56.8
Principal sensory trigeminal nucleus
nTPM: 60.4
2367 Female, age 91, left hemisphere 65.6
2324 Male, age 76, both hemispheres 62.5
2158 Male, age 61, both hemispheres 59.0
2008 Male, age 80, left hemisphere 54.4
Reticular pontine nucleus, caudal
nTPM: 61.7
2092 Male, age 76, both hemispheres 70.4
2559 Male, age 74, both hemispheres 64.1
2457 Female, age 91, both hemispheres 59.6
2332 Male, age 80, right hemisphere 52.8
Reticular pontine nucleus, oral
nTPM: 67.8
2361 Male, age 74, both hemispheres 70.6
2167 Male, age 76, both hemispheres 69.5
1939 Male, age 80, both hemispheres 67.9
2366 Female, age 91, both hemispheres 67.4
2012 Female, age 85, both hemispheres 63.5
Reticulotegmental nucleus
nTPM: 57.4
2322 Female, age 91, both hemispheres 60.2
2333 Male, age 80, both hemispheres 60.2
2452 Male, age 74, both hemispheres 59.4
2325 Male, age 76, both hemispheres 49.7
Spinal trigeminal nucleus, caudal
nTPM: 64.5
2390 Female, age 91, both hemispheres 69.5
2447 Male, age 76, both hemispheres 68.1
2308 Male, age 80, both hemispheres 65.1
2312 Male, age 61, both hemispheres 62.7
2642 Male, age 74, both hemispheres 57.2
Spinal trigeminal nucleus, interpolar
nTPM: 65.2
2625 Male, age 61, both hemispheres 74.2
2033 Male, age 80, both hemispheres 68.3
2066 Male, age 76, right hemisphere 67.1
2386 Female, age 85, both hemispheres 59.0
2389 Female, age 91, both hemispheres 57.5
Spinal trigeminal nucleus, oral
nTPM: 60.2
1978 Male, age 76, both hemispheres 66.9
2164 Male, age 80, both hemispheres 57.1
2737 Female, age 85, both hemispheres 56.6
Spinal vestibular nucleus
nTPM: 66.0
2748 Male, age 76, both hemispheres 74.7
2186 Female, age 91, both hemispheres 66.7
2780 Male, age 80, both hemispheres 66.3
2806 Female, age 85, both hemispheres 63.9
2384 Male, age 74, both hemispheres 63.3
2796 Male, age 61, both hemispheres 61.0
Subcoeruleus area
nTPM: 59.9
2369 Female, age 85, left hemisphere 72.4
1958 Male, age 80, both hemispheres 60.8
2451 Male, age 74, both hemispheres 57.9
2089 Male, age 76, left hemisphere 54.5
2323 Female, age 91, left hemisphere 54.0
Superior olive
nTPM: 62.1
2020 Male, age 76, both hemispheres 72.1
2364 Male, age 74, right hemisphere 67.3
1875 Female, age 85, both hemispheres 61.8
2329 Male, age 80, right hemisphere 55.6
2561 Female, age 91, both hemispheres 53.5
Superior vestibular nucleus
nTPM: 61.9
2015 Male, age 80, both hemispheres 64.2
2383 Male, age 74, both hemispheres 60.9
2061 Male, age 76, both hemispheres 60.4
Ventral medullary reticular nucleus
nTPM: 63.0
2060 Male, age 76, both hemispheres 64.2
2372 Male, age 61, both hemispheres 61.8
Ventral periolivary nuclei
nTPM: 56.7
2023 Male, age 76, both hemispheres 67.7
2165 Male, age 80, both hemispheres 63.2
2130 Female, age 85, both hemispheres 51.9
2794 Female, age 91, left hemisphere 44.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 65.2
1986 Male, age 76, both hemispheres 68.5
2118 Male, age 80, both hemispheres 67.6
2180 Male, age 61, both hemispheres 66.0
2741 Female, age 85, both hemispheres 62.7
2302 Female, age 91, both hemispheres 61.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 60.6
1959 Male, age 76, both hemispheres 64.2
2359 Male, age 61, both hemispheres 63.1
2840 Female, age 85, both hemispheres 62.3
2161 Male, age 80, both hemispheres 59.4
2456 Female, age 91, both hemispheres 58.2
2449 Male, age 74, both hemispheres 56.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 96.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 91.1
FF:10182-103D2 60 years, female 95.7
FF:10165-103B3 76 years, female 86.6
Medulla oblongata
Scaled Tags Per Million: 94.1
FF:10174-103C3 60 years, female 107.0
FF:10038-101F2 18-64 years, mixed 100.3
FF:10155-103A2 76 years, female 75.1
Pons
Scaled Tags Per Million: 96.3
FF:10033-101E6 18-54 years, mixed 96.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 38.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 37.3
Samples: 4

Max nTPM: 41.6
Min nTPM: 34.2
Sample A Female 34.2
Sample B Female 41.6
Sample C Male 37.9
Sample D Male 35.3
Pons
nTPM: 38.5
Samples: 4

Max nTPM: 43.8
Min nTPM: 36.0
Sample A Female 36.6
Sample B Female 36.0
Sample C Male 37.7
Sample D Male 43.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 63.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 63.0
Samples: 4

Max nTPM: 71.7
Min nTPM: 57.4
Sample A Male 71.7
Sample B Male 57.4
Sample C Female 63.6
Sample D Female 59.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
68269712 Antisense, RP_041129_02_B01, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.3
68269712 Antisense, RP_041129_02_B01, Mouse strain C57BL/6J (56 days, male) 0.3

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