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TMEM63B
HPA
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  • TMEM63B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TMEM63B
Synonyms C6orf110, dJ421H19.2, DKFZp434P0531
Gene descriptioni

Full gene name according to HGNC.

Transmembrane protein 63B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband p21.1
Chromosome location (bp) 44126914 - 44155519
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000137216 (version 109)
Entrez gene 55362
HGNC HGNC:17735
UniProt Q5T3F8 (UniProt - Evidence at protein level)
neXtProt NX_Q5T3F8
GeneCards TMEM63B
Antibodypedia TMEM63B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Mechanosensitive cation channel with low conductance and high activation threshold. Essential for the baby's first breath and respiration throughout life. Upon lung inflation conducts cation currents in alveolar type 1 and 2 cells triggering lamellar body exocytosis and surfactant secretion into airspace (By similarity) 1, 2. Osmosensitive cation channel preferentially activated by hypotonic stress. Acts as an osmosensor in cochlear outer hair cells (OHCs) where it mediates calcium influx and regulatory volume decrease response. Required for the maintenance of OHC morphology, OHC survival and normal hearing (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Exocytosis, Hearing, Ion transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable calcium activated cation channel activity; mechanosensitive ion channel activity; and osmolarity-sensing cation channel activity. Predicted to be involved in cation transmembrane transport. Located in actin cytoskeleton and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TMEM63B-201
ENSP00000259746
ENST00000259746
Q5T3F8
[Direct mapping] CSC1-like protein 2
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005227 [calcium activated cation channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0008381 [mechanosensitive ion channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0034220 [ion transmembrane transport]
GO:0098655 [cation transmembrane transport]
GO:1990760 [osmolarity-sensing cation channel activity]
Show all
832 aa
95 kDa
Yes >9
TMEM63B-202
ENSP00000327154
ENST00000323267
Q5T3F8
[Direct mapping] CSC1-like protein 2
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005227 [calcium activated cation channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0008381 [mechanosensitive ion channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0034220 [ion transmembrane transport]
GO:0098655 [cation transmembrane transport]
GO:1990760 [osmolarity-sensing cation channel activity]
Show all
832 aa
95 kDa
Yes >9
TMEM63B-203
ENSP00000360960
ENST00000371893
H3BLW6
[Direct mapping] CSC1-like protein 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005227 [calcium activated cation channel activity]
GO:0005886 [plasma membrane]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0034220 [ion transmembrane transport]
GO:0098655 [cation transmembrane transport]
Show all
761 aa
86.7 kDa
No 9
TMEM63B-208
ENSP00000437163
ENST00000532634
E9PNG1
[Direct mapping] CSC1-like protein 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005227 [calcium activated cation channel activity]
GO:0016020 [membrane]
GO:0034220 [ion transmembrane transport]
GO:0098655 [cation transmembrane transport]
Show all
226 aa
25.6 kDa
Yes 3

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