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SLCO2B1
HPA
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  • SLCO2B1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLCO2B1
Synonyms OATP-B, OATP2B1, SLC21A9
Gene descriptioni

Full gene name according to HGNC.

Solute carrier organic anion transporter family member 2B1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q13.4
Chromosome location (bp) 75100563 - 75206549
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000137491 (version 109)
Entrez gene 11309
HGNC HGNC:10962
UniProt O94956 (UniProt - Evidence at protein level)
neXtProt NX_O94956
GeneCards SLCO2B1
Antibodypedia SLCO2B1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Mediates the Na(+)-independent transport of steroid sulfate conjugates and other specific organic anions 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16. Responsible for the transport of estrone 3-sulfate (E1S) through the basal membrane of syncytiotrophoblast, highlighting a potential role in the placental absorption of fetal-derived sulfated steroids including the steroid hormone precursor dehydroepiandrosterone sulfate (DHEA-S) 17, 18. Also facilitates the uptake of sulfated steroids at the basal/sinusoidal membrane of hepatocytes, therefore accounting for the major part of organic anions clearance of liver 19. Mediates the intestinal uptake of sulfated steroids 20, 21. Mediates the uptake of the neurosteroids DHEA-S and pregnenolone sulfate (PregS) into the endothelial cells of the blood-brain barrier as the first step to enter the brain 22, 23. Also plays a role in the reuptake of neuropeptides such as substance P/TAC1 and vasoactive intestinal peptide/VIP released from retinal neurons 24. May act as a heme transporter that promotes cellular iron availability via heme oxygenase/HMOX2 and independently of TFRC 25. Also transports heme by-product coproporphyrin III (CPIII), and may be involved in their hepatic disposition 26. Mediates the uptake of other substrates such as prostaglandins D2 (PGD2), E1 (PGE1) and E2 (PGE2), taurocholate, L-thyroxine, leukotriene C4 and thromboxane B2 27, 28, 29, 30, Ref.25). May contribute to regulate the transport of organic compounds in testis across the blood-testis-barrier (Probable). Shows a pH-sensitive substrate specificity which may be ascribed to the protonation state of the binding site and leads to a stimulation of substrate transport in an acidic microenvironment 31, 32, 33. The exact transport mechanism has not been yet deciphered but most likely involves an anion exchange, coupling the cellular uptake of organic substrate with the efflux of an anionic compound 34, 35, 36. Hydrogencarbonate/HCO3(-) acts as a probable counteranion that exchanges for organic anions 37. Cytoplasmic glutamate may also act as counteranion in the placenta 38. An inwardly directed proton gradient has also been proposed as the driving force of E1S uptake with a (H(+):E1S) stoichiometry of (1:1) 39.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This locus encodes a member of the organic anion-transporting polypeptide family of membrane proteins. The protein encoded by this locus may function in regulation of placental uptake of sulfated steroids. Alternatively spliced transcript variants have been described. [provided by RefSeq, Nov 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLCO2B1-201
ENSP00000289575
ENST00000289575
A0A024R5I4
[Direct mapping] Solute carrier organic anion transporter family member
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
709 aa
76.7 kDa
No >9
SLCO2B1-203
ENSP00000388912
ENST00000428359
O94956
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006805 [xenobiotic metabolic process]
GO:0006811 [ion transport]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015711 [organic anion transport]
GO:0015721 [bile acid and bile salt transport]
GO:0015732 [prostaglandin transport]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0042167 [heme catabolic process]
GO:0043252 [sodium-independent organic anion transport]
GO:0055085 [transmembrane transport]
GO:0150104 [transport across blood-brain barrier]
Show all
687 aa
74.4 kDa
No >9
SLCO2B1-204
ENSP00000389653
ENST00000454962
O94956
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006805 [xenobiotic metabolic process]
GO:0006811 [ion transport]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0015125 [bile acid transmembrane transporter activity]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015711 [organic anion transport]
GO:0015721 [bile acid and bile salt transport]
GO:0015732 [prostaglandin transport]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0042167 [heme catabolic process]
GO:0043252 [sodium-independent organic anion transport]
GO:0055085 [transmembrane transport]
GO:0150104 [transport across blood-brain barrier]
Show all
482 aa
52.5 kDa
No 7
SLCO2B1-205
ENSP00000436324
ENST00000525650
A0A0A0MTF1
[Direct mapping] Solute carrier organic anion transporter family member
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
565 aa
61.2 kDa
No 9
SLCO2B1-206
ENSP00000431324
ENST00000525845
A0A1B0GX35
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
43 aa
4.7 kDa
No 0
SLCO2B1-208
ENSP00000434742
ENST00000526839
H0YE11
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
147 aa
15.8 kDa
No 2
SLCO2B1-209
ENSP00000436513
ENST00000527180
E9PI53
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
150 aa
16.2 kDa
No 2
SLCO2B1-213
ENSP00000435384
ENST00000530556
A0A1B0GX35
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
43 aa
4.7 kDa
No 0
SLCO2B1-215
ENSP00000432889
ENST00000531713
E9PN87
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
87 aa
9.3 kDa
No 1
SLCO2B1-217
ENSP00000434112
ENST00000532236
E9PRW4
[Direct mapping] Solute carrier organic anion transporter family member
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
593 aa
64.2 kDa
No 9
SLCO2B1-218
ENSP00000431192
ENST00000534004
A0A1B0GX35
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
43 aa
4.7 kDa
No 0
SLCO2B1-219
ENSP00000433872
ENST00000534186
E9PIU9
[Direct mapping] Solute carrier organic anion transporter family member 2B1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0055085 [transmembrane transport]
Show all
127 aa
13.8 kDa
No 2

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